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3
votes
2
replies
5.4k
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RAxML: confusion about Bootstrap searches and ML searches
bootstrap raxml
updated 7.8 years ago by ▴ 30 • written 8.9 years ago by ▴ 700
0
votes
1
reply
2.6k
views
Doubt about batch effect and gene expression analysis
gene expression batch limma
updated 7.8 years ago by 89k • written 7.8 years ago by ▴ 700
3
votes
3
replies
5.6k
views
Cutoff for TPM value
tpm transcriptome
updated 7.9 years ago by ★ 3.7k • written 8.1 years ago by ▴ 700
0
votes
1
reply
3.8k
views
Comment: C: Average intron length in Drosophila melagnoster
8.0 years ago by Picasa ▴ 700
2
votes
3
replies
5.2k
views
Intron size from gtf/gff file ?
intron annotation
updated 8.0 years ago by ▴ 990 • written 8.0 years ago by ▴ 700
0
votes
2
replies
49k
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Comment: C: PCA in a RNA seq analysis
8.0 years ago by Picasa ▴ 700
0
votes
1
reply
49k
views
Comment: C: PCA in a RNA seq analysis
8.0 years ago by Picasa ▴ 700
0
votes
1
reply
49k
views
Comment: C: PCA in a RNA seq analysis
8.0 years ago by Picasa ▴ 700
0
votes
1
reply
49k
views
Comment: C: PCA in a RNA seq analysis
8.0 years ago by Picasa ▴ 700
0
votes
1
reply
49k
views
Comment: C: PCA in a RNA seq analysis
8.0 years ago by Picasa ▴ 700
1
vote
1
reply
3.7k
views
Gene expression PCA with DESeq2 filtration
PCA rna filtration
updated 8.0 years ago by 89k • written 8.0 years ago by ▴ 700
0
votes
0
replies
5.7k
views
Comment: C: Augustus scipio error
8.0 years ago by Picasa ▴ 700
0
votes
0
replies
3.1k
views
Filter transcripts based on expression value: TPM vs TMM ?
transcriptome tpm tmm
8.1 years ago by Picasa ▴ 700
0
votes
1
reply
1.7k
views
Comment: C: Converting PE to SE
8.1 years ago by Picasa ▴ 700
2
votes
4
replies
1.7k
views
Converting PE to SE
PE SE
8.1 years ago by Picasa ▴ 700
0
votes
1
reply
2.5k
views
Comment: C: Extract all paired reads from sam file
8.1 years ago by Picasa ▴ 700
2
votes
4
replies
2.5k
views
Extract all paired reads from sam file
sam paired
updated 8.1 years ago by 90k • written 8.1 years ago by ▴ 700
6
votes
2
replies
8.2k
views
MAKER annotation post processing (AED score)
maker aed
updated 8.1 years ago by ▴ 140 • written 8.3 years ago by ▴ 700
2
votes
1
reply
3.3k
views
Extract reads from specific target in .bam file
bam filter
8.1 years ago by Picasa ▴ 700
0
votes
0
replies
8.9k
views
Comment: Comment: Error For End Coordinate When Running Cuffdiff
8.4 years ago by Picasa ▴ 700
0
votes
0
replies
4.1k
views
Comment: C: Using RNA seq for genome annotation
8.4 years ago by Picasa ▴ 700
0
votes
1
reply
4.1k
views
Comment: C: Using RNA seq for genome annotation
8.4 years ago by Picasa ▴ 700
0
votes
0
replies
3.7k
views
Comment: C: Rna-Seq Contaminants Assembling Likelihood
8.5 years ago by Picasa ▴ 700
0
votes
1
reply
5.3k
views
Comment: C: What can I do after my Pacbio genome assembly ?
8.5 years ago by Picasa ▴ 700
0
votes
1
reply
2.3k
views
Comment: C: Best de novo genome assemblies using only Illumina data ??
8.6 years ago by Picasa ▴ 700
1
vote
3
replies
2.3k
views
Best de novo genome assemblies using only Illumina data ??
de novo assembly illumina
8.6 years ago by Picasa ▴ 700
0
votes
1
reply
5.3k
views
Comment: C: What can I do after my Pacbio genome assembly ?
8.7 years ago by Picasa ▴ 700
0
votes
2
replies
5.3k
views
Comment: C: What can I do after my Pacbio genome assembly ?
8.7 years ago by Picasa ▴ 700
11
votes
10
replies
5.3k
views
What can I do after my Pacbio genome assembly ?
pacbio
updated 8.7 years ago by ★ 1.5k • written 8.7 years ago by ▴ 700
0
votes
0
replies
1.2k
views
Comment: C: Most represented reads in SAM file
8.7 years ago by Picasa ▴ 700
0
votes
1
reply
1.2k
views
Comment: C: Most represented reads in SAM file
8.7 years ago by Picasa ▴ 700
0
votes
4
replies
1.2k
views
Most represented reads in SAM file
sam reads representated
8.7 years ago by Picasa ▴ 700
0
votes
1
reply
3.8k
views
Comment: C: Help for limma DE interpretation.
8.8 years ago by Picasa ▴ 700
0
votes
0
replies
6.9k
views
Comment: C: Mismatch setting for bwa mem ?
8.8 years ago by Picasa ▴ 700
0
votes
3
replies
6.9k
views
Mismatch setting for bwa mem ?
bwa mem mismatch
8.8 years ago by Picasa ▴ 700
1
vote
3
replies
3.8k
views
Help for limma DE interpretation.
limma rnaseq
updated 8.8 years ago by 105k • written 8.8 years ago by ▴ 700
1
vote
0
replies
3.4k
views
Comment: C: PCA from kallisto output
8.8 years ago by Picasa ▴ 700
4
votes
4
replies
3.4k
views
PCA from kallisto output
kallsito
updated 8.8 years ago by ▴ 760 • written 8.8 years ago by ▴ 700
1
vote
0
replies
15k
views
Comment: C: PCA tpm fpkm
8.8 years ago by Picasa ▴ 700
3
votes
3
replies
15k
views
RAxML outputs: which one I have to take ?
RAxML output
updated 2.5 years ago by 56k • written 8.9 years ago by ▴ 700
0
votes
1
reply
4.9k
views
Comment: A: blastn staxids returning N/A
8.8 years ago by Picasa ▴ 700
0
votes
1
reply
7.3k
views
Comment: C: Any advice for a de novo genome assembly
8.8 years ago by Picasa ▴ 700
0
votes
3
replies
2.6k
views
Contig's coverage and bam files.
bam contig coverage
updated 8.8 years ago by 20 • written 9.0 years ago by ▴ 700
2
votes
2
replies
2.5k
views
Download Uniref ID though wget
uniref
updated 8.8 years ago by ★ 2.4k • written 8.9 years ago by ▴ 700
0
votes
0
replies
13k
views
Comment: C: What Is A Typical Salary Range For Bioinformatician In Singapore
8.8 years ago by Picasa ▴ 700
1
vote
3
replies
5.5k
views
Infering phylogenetic tree from MSA with MEGA ?
phylogenie msa mega
updated 8.8 years ago by 20 • written 9.0 years ago by ▴ 700
4
votes
3
replies
3.4k
views
Read filtering strategy and BWA
bwa contamination
updated 8.9 years ago by 20k • written 8.9 years ago by ▴ 700
1
vote
3
replies
2.2k
views
Not consistent result between SAM filtering and bowtie
sam bowtie
updated 8.9 years ago by 20 • written 9.3 years ago by ▴ 700
0
votes
1
reply
65k
views
Comment: C: Download All The Bacterial Genomes From Ncbi
8.9 years ago by Picasa ▴ 700
0
votes
1
reply
2.6k
views
Comment: C: Assessment of de novo genome assembly accuracy ?
8.9 years ago by Picasa ▴ 700
360 results • Page 4 of 8
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