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Comment: Comment: Variant annotation using VEP
4.1 years ago by nkausthu ▴ 40
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3
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1.4k
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Variant annotation using VEP
Annotation Zygosity VEP
updated 3.9 years ago by ▴ 20 • written 4.1 years ago by ▴ 40
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4
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3.6k
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Using ExomeDepth for GRCH38 processed samples to call CNVs
Exome GrCh38 ExomeDepth CNV
updated 23 months ago by ▴ 220 • written 4.6 years ago by ▴ 40
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Comment: C: Exome data processing and variant calling based on GRCH38
5.1 years ago by nkausthu ▴ 40
2
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3
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1.4k
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Exome data processing and variant calling based on GRCH38
GRCH38 ALT-aware alignment Variant calling
updated 5.1 years ago by 48k • written 5.1 years ago by ▴ 40
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1.6k
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Comment: C: Alignment of reads to gene and pseudogene
5.1 years ago by nkausthu ▴ 40
1
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3
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1.6k
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Alignment of reads to gene and pseudogene
alignment Gene pseudogene bwa mapping quality
5.1 years ago by nkausthu ▴ 40
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4
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1.6k
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Generation of incorrect heterozygous calls after left normalization using bcftools
bcftools left normalization multiallelic sites
updated 5.9 years ago by 89k • written 6.0 years ago by ▴ 40
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1
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1.6k
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Comment: C: Generation of incorrect heterozygous calls after left normalization using bcftoo
6.0 years ago by nkausthu ▴ 40
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2.9k
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Comment: C: Why bcftools + guess-ploidy is not giving the correct results
6.3 years ago by nkausthu ▴ 40
1
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5
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2.9k
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Why bcftools + guess-ploidy is not giving the correct results
bcftools guess-ploidy
6.3 years ago by nkausthu ▴ 40
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1
reply
1.6k
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SPANR result interpretation
SPANR Intronic variant Impact on splicing
updated 6.7 years ago by 89k • written 6.7 years ago by ▴ 40
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1
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2.0k
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Comment: C: Identification of break points for a balanced translocation
7.0 years ago by nkausthu ▴ 40
1
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4
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2.0k
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Identification of break points for a balanced translocation
WGS Breakpoint analysis Balanced translocation
updated 7.0 years ago by 166k • written 7.0 years ago by ▴ 40
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1
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1.8k
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How to order biostar handbook professional version
Biostar handbook
updated 7.0 years ago by ★ 19k • written 7.0 years ago by ▴ 40
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1
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3.9k
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Comment: C: Extraction of partially mapped reads from BAM
7.0 years ago by nkausthu ▴ 40
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1
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3.9k
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Comment: C: Extraction of partially mapped reads from BAM
7.0 years ago by nkausthu ▴ 40
3
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8
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3.9k
views
Extraction of partially mapped reads from BAM
BAM Partially mapped reads BWA
updated 7.0 years ago by 166k • written 7.0 years ago by ▴ 40
1
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1
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1.7k
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Identification of Common ROH region between two exomes
ROH Filtus BCFTOOLs EXOME
updated 7.4 years ago by 20 • written 7.4 years ago by ▴ 40
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1
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1.6k
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Comment: C: extractPIRs is throwing an ERROR
7.4 years ago by nkausthu ▴ 40
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3
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1.6k
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extractPIRs is throwing an ERROR
extractPIRs SHAPEIT PHASING
updated 7.4 years ago by 153k • written 7.4 years ago by ▴ 40
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4.1k
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Comment: C: Tools for visualization of CNVs called by XHMM
7.5 years ago by nkausthu ▴ 40
0
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1
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4.1k
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Comment: C: Tools for visualization of CNVs called by XHMM
7.5 years ago by nkausthu ▴ 40
0
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1
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4.1k
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Comment: C: Tools for visualization of CNVs called by XHMM
7.5 years ago by nkausthu ▴ 40
3
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8
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4.1k
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Tools for visualization of CNVs called by XHMM
CNV Visualization XHMM
updated 7.5 years ago by ★ 3.4k • written 7.5 years ago by ▴ 40
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Answer: A: Tools for visualization of CNVs called by XHMM
7.5 years ago by nkausthu ▴ 40
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0
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2.5k
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Answer: A: VisCap 'mat.cov' not found error in R
7.5 years ago by nkausthu ▴ 40
3
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6
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2.5k
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literature mining for genes and mutations
Pubmed Genes Mutations mining
7.5 years ago by nkausthu ▴ 40
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2.5k
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Answer: A: literature mining for genes and mutations
7.5 years ago by nkausthu ▴ 40
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1
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2.5k
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Comment: C: literature mining for genes and mutations
7.5 years ago by nkausthu ▴ 40
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1.8k
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Comment: C: High score deletion called by XHMM shows full coverage through IGV
7.7 years ago by nkausthu ▴ 40
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0
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1.8k
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Answer: A: High score deletion called by XHMM shows full coverage through IGV
7.7 years ago by nkausthu ▴ 40
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3
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1.8k
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High score deletion called by XHMM shows full coverage through IGV
XHMM CNV IGV
7.7 years ago by nkausthu ▴ 40
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0
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4.6k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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1
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4.6k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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1
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4.6k
views
Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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1
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4.6k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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1
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4.6k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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1
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4.6k
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Comment: C: Annotation of XHMM VCF file (CNV analysis)
7.8 years ago by nkausthu ▴ 40
0
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13
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4.6k
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Annotation of XHMM VCF file (CNV analysis)
CNV EXOME XHMM ANNOTATION VCF
7.8 years ago by nkausthu ▴ 40
2
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11
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4.0k
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Allele frequency calculation
Allele frequency Joint genotype calling
8.5 years ago by nkausthu ▴ 40
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1
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4.0k
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Comment: C: Allele frequency calculation
8.5 years ago by nkausthu ▴ 40
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1
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4.0k
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Comment: C: Allele frequency calculation
8.5 years ago by nkausthu ▴ 40
0
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1
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4.0k
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Comment: C: Allele frequency calculation
8.5 years ago by nkausthu ▴ 40
0
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1
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4.0k
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Comment: C: Allele frequency calculation
8.5 years ago by nkausthu ▴ 40
5
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6
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4.5k
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Number of homozygous and heterozygous variants
Genotype homozygous heterozygous VCF
updated 8.5 years ago by ★ 1.7k • written 8.5 years ago by ▴ 40
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0
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4.5k
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Comment: C: Number of homozygous and heterozygous variants
8.5 years ago by nkausthu ▴ 40
0
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1
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4.5k
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Comment: C: Number of homozygous and heterozygous variants
8.5 years ago by nkausthu ▴ 40
0
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2
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2.9k
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Variant frequency calculation
Variant frequency homozygous heterozygous
8.6 years ago by nkausthu ▴ 40
4
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2
replies
1.7k
views
Candidate Gene Prioritization
Seed genes Prioritization Clustering
updated 8.9 years ago by ▴ 180 • written 8.9 years ago by ▴ 40
54 results • Page 1 of 2
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