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259
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Comment: Comment: Length Polymorphism using long read Nanopore
8 weeks ago by pixie@bioinfo ★ 1.5k
0
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2
replies
259
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Length Polymorphism using long read Nanopore
genotyping nanopore
8 weeks ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
406
views
Comment: Comment: Issues with Minimap2 and ONT (Nanopore)
5 months ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
406
views
Issues with Minimap2 and ONT (Nanopore)
minimap nanopore
5 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
802
views
Comment: Comment: Development plan for a bioinformatics database developer/coder
10 months ago by pixie@bioinfo ★ 1.5k
1
vote
3
replies
802
views
Forum: Development plan for a bioinformatics database developer/coder
developer
10 months ago by pixie@bioinfo ★ 1.5k
1
vote
2
replies
403
views
Internal controls/ Reference Samples for Nanopore
nanopore
updated 11 months ago by ★ 2.6k • written 11 months ago by ★ 1.5k
0
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0
replies
923
views
Comment: Comment: Regarding using a "pseudo reference genome" for aligning short reads
11 months ago by pixie@bioinfo ★ 1.5k
0
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1
reply
1.8k
views
Comment: Comment: WGCNA kME vs kWithin Hub Gene Disparities
13 months ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
324
views
Identifying Multipartite viruses (Viral Bioinformatics)
genomics
13 months ago by pixie@bioinfo ★ 1.5k
2
votes
3
replies
923
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Regarding using a "pseudo reference genome" for aligning short reads
genomics
11 months ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
714
views
Comment: Comment: How to proceed after Kraken2 analysis
14 months ago by pixie@bioinfo ★ 1.5k
3
votes
3
replies
714
views
How to proceed after Kraken2 analysis
rnaseq kraken
updated 14 months ago by ★ 2.6k • written 14 months ago by ★ 1.5k
31
votes
11
replies
7.2k
views
8 follow
Basics Of Systems Biology...
network
updated 18 months ago by • 0 • written 14.5 years ago by ★ 1.5k
2
votes
1
reply
705
views
Sequence statistics to report viruses (or bacteria and fungi) using Nanopore for diagnostic purpose
nanopore
updated 22 months ago by 7.0k • written 22 months ago by ★ 1.5k
8
votes
4
replies
1.3k
views
Forum: Implementing FAIR data principles to a bioinformatics lab
data
updated 23 months ago by 23k • written 23 months ago by ★ 1.5k
0
votes
1
reply
550
views
Trimming SSR (repetitive primer) sequences
genomics
updated 2.2 years ago by 148k • written 2.2 years ago by ★ 1.5k
0
votes
3
replies
837
views
Calculate distribution of reads over the reference genome
ngs
updated 2.3 years ago by 22k • written 2.3 years ago by ★ 1.5k
1
vote
2
replies
720
views
Identifying reliable regions of reference genomes
snp genomics
updated 2.4 years ago by ★ 2.1k • written 2.4 years ago by ★ 1.5k
0
votes
1
reply
815
views
Comment: Comment: Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
2.5 years ago by pixie@bioinfo ★ 1.5k
0
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3
replies
815
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Recovering sequencing reads due to Low-Diversity Illumina Sequencing Libraries
Illumina mini-seq
updated 2.5 years ago by 148k • written 2.5 years ago by ★ 1.5k
0
votes
0
replies
745
views
Forum: Bioinformatics for understanding cancer and other diseases
cancer omics
updated 2.1 years ago by 44k • written 2.6 years ago by ★ 1.5k
0
votes
0
replies
461
views
pysam fetch alignments corresponding to a taxid
pysam samtools
2.7 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
696
views
Comment: Comment: How to calculate p-value for Network Data (Cluster Detection)
2.8 years ago by pixie@bioinfo ★ 1.5k
0
votes
2
replies
696
views
How to calculate p-value for Network Data (Cluster Detection)
network correlation
2.8 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
465
views
Diagnostic Plots for SNP quality assesment
vcf
2.9 years ago by pixie@bioinfo ★ 1.5k
2
votes
1
reply
907
views
VCF file, calculate depth per sample
vcf bcftools
updated 2.9 years ago by ▴ 520 • written 2.9 years ago by ★ 1.5k
0
votes
1
reply
730
views
Comment: Comment: Identify predicted TF targets by binding motif
2.9 years ago by pixie@bioinfo ★ 1.5k
0
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1
reply
872
views
Problem with VCF format while using "VariantAnnotation" R package
vcf
updated 3.0 years ago by ★ 1.6k • written 3.0 years ago by ★ 1.5k
8
votes
11
replies
7.2k
views
6 follow
Heatmap In R-Wgcna-->Error While Plotting Tom
r heatmap
updated 3.0 years ago by • 0 • written 11.5 years ago by ★ 1.5k
0
votes
0
replies
488
views
Information about Genotyping by Sequencing (GBS)
snp
updated 3.2 years ago by 148k • written 3.2 years ago by ★ 1.5k
0
votes
0
replies
700
views
Create combined CpG and non-CpG bedgraphs for DNA methylation using Bismark
methylation
3.3 years ago by pixie@bioinfo ★ 1.5k
2
votes
2
replies
850
views
R programming: basics to challenging
R
updated 3.5 years ago by 86k • written 3.5 years ago by ★ 1.5k
0
votes
1
reply
1.5k
views
Plots for Correlation between two dataframes by row
R
updated 3.6 years ago by 88k • written 3.6 years ago by ★ 1.5k
0
votes
2
replies
761
views
Ideas to represent RNA-seq expression profile (Z-scores) and the significance level at the same time
R RNAseq
updated 3.6 years ago by ★ 2.9k • written 3.6 years ago by ★ 1.5k
2
votes
9
replies
24k
views
7 follow
HISAT error: Encountered internal HISAT2 exception (#1)
RNA-Seq
updated 3.7 years ago by • 0 • written 7.6 years ago by ★ 1.5k
0
votes
1
reply
1.2k
views
Segmentation fault with HOMER
homer HiC
updated 3.0 years ago by • 0 • written 3.9 years ago by ★ 1.5k
2
votes
3
replies
2.7k
views
Forum: MOOC for AI and Machine learning for Bioinformatics
ML AI
updated 22 months ago by 44k • written 4.4 years ago by ★ 1.5k
0
votes
1
reply
616
views
P value for test for proportions and random sampling
R
4.0 years ago by pixie@bioinfo ★ 1.5k
2
votes
0
replies
1.5k
views
Answer: A: Self Organizing Maps for RNA-seq data
updated 4.2 years ago by 148k • written 4.2 years ago by ★ 1.5k
4
votes
3
replies
1.5k
views
Self Organizing Maps for RNA-seq data
RNA-Seq
4.2 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
1.5k
views
Comment: C: Self Organizing Maps for RNA-seq data
4.2 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
2.0k
views
Comment: C: Using Deeptool for profile plots
4.2 years ago by pixie@bioinfo ★ 1.5k
0
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1
reply
2.0k
views
Comment: C: Using Deeptool for profile plots
4.2 years ago by pixie@bioinfo ★ 1.5k
0
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0
replies
2.0k
views
Comment: C: Using Deeptool for profile plots
4.2 years ago by pixie@bioinfo ★ 1.5k
2
votes
5
replies
2.0k
views
Using Deeptool for profile plots
deeptools
4.2 years ago by pixie@bioinfo ★ 1.5k
0
votes
0
replies
832
views
Issue with Diffreps
ChIP-Seq
4.2 years ago by pixie@bioinfo ★ 1.5k
4
votes
2
replies
2.9k
views
Bismark: bedgraph to bigwig for DNA methylation
methylation
updated 4.2 years ago by ▴ 20 • written 4.3 years ago by ★ 1.5k
0
votes
0
replies
682
views
Ideas Regarding TF regulatory network
network
4.2 years ago by pixie@bioinfo ★ 1.5k
0
votes
1
reply
1.8k
views
CUT&RUN analysis pipeline
alignment sequencing
updated 4.2 years ago by 13k • written 4.2 years ago by ★ 1.5k
259 results • Page 1 of 6
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