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6
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9
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1.9k
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Find out the mutation type from TCGA data
TCGA mutation melanoma
updated 5.6 years ago by 88k • written 5.6 years ago by ▴ 340
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1.9k
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Comment: C: Find out the mutation type from TCGA data
5.6 years ago by Pin.Bioinf ▴ 340
1
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1
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1.0k
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lncPath deleted from CRAN
lncrnas R networks
updated 5.7 years ago by 11k • written 5.7 years ago by ▴ 340
5
votes
12
replies
2.0k
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25 DE genes with 8 samples and 4 DE genes with 16 samples
RNA-Seq DESeq2
updated 5.7 years ago by 20 • written 5.7 years ago by ▴ 340
1
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0
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2.0k
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Comment: C: 25 DE genes with 8 samples and 4 DE genes with 16 samples
5.7 years ago by Pin.Bioinf ▴ 340
0
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1
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2.0k
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Comment: C: 25 DE genes with 8 samples and 4 DE genes with 16 samples
5.7 years ago by Pin.Bioinf ▴ 340
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2
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2.0k
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Comment: C: 25 DE genes with 8 samples and 4 DE genes with 16 samples
5.7 years ago by Pin.Bioinf ▴ 340
0
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1
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2.0k
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Comment: C: 25 DE genes with 8 samples and 4 DE genes with 16 samples
5.7 years ago by Pin.Bioinf ▴ 340
0
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1
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2.0k
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Comment: C: 25 DE genes with 8 samples and 4 DE genes with 16 samples
5.7 years ago by Pin.Bioinf ▴ 340
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1
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2.7k
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Comment: A: Good mean coverage but big std in coverage
5.7 years ago by Pin.Bioinf ▴ 340
8
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15
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2.7k
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Good mean coverage but big std in coverage
bamqc qualimap coverage rnaseq
5.7 years ago by Pin.Bioinf ▴ 340
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2
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2.7k
views
Comment: A: Good mean coverage but big std in coverage
5.7 years ago by Pin.Bioinf ▴ 340
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1
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2.7k
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Comment: C: Good mean coverage but big std in coverage
5.7 years ago by Pin.Bioinf ▴ 340
0
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1
reply
2.7k
views
Comment: A: Good mean coverage but big std in coverage
5.7 years ago by Pin.Bioinf ▴ 340
0
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1
reply
2.7k
views
Comment: C: Good mean coverage but big std in coverage
5.7 years ago by Pin.Bioinf ▴ 340
1
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0
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5.3k
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Comment: C: TCGA immunotherapy treated melanoma data
5.7 years ago by Pin.Bioinf ▴ 340
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1
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5.3k
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Comment: C: TCGA immunotherapy treated melanoma data
5.7 years ago by Pin.Bioinf ▴ 340
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5.3k
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Comment: A: TCGA immunotherapy treated melanoma data
5.7 years ago by Pin.Bioinf ▴ 340
4
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6.7k
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Answer: A: STAR --quantMode GeneCounts function
5.7 years ago by Pin.Bioinf ▴ 340
2
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0
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1.9k
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Answer: A: Best pipeline for time course RNA-SEQ analysis for single cell organism
5.7 years ago by Pin.Bioinf ▴ 340
1
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0
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1.5k
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Comment: C: Integrating methylation in survival analysis
5.7 years ago by Pin.Bioinf ▴ 340
3
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5
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1.5k
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Integrating methylation in survival analysis
methylation survival RNA-Seq R
5.7 years ago by Pin.Bioinf ▴ 340
3
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2
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3.7k
views
Design for paired Deseq2 analysis
RNA-Seq deseq2
updated 5.8 years ago by ▴ 30 • written 5.8 years ago by ▴ 340
2
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2
replies
1.1k
views
Ribosomal depletion percentage
ribosomal depletion RNA-Seq
5.8 years ago by Pin.Bioinf ▴ 340
0
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1
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1.1k
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Comment: C: Considering that the basal expression level is not 0 for the calculation of the
5.8 years ago by Pin.Bioinf ▴ 340
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1
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1.1k
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Comment: C: Considering that the basal expression level is not 0 for the calculation of the
5.8 years ago by Pin.Bioinf ▴ 340
0
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6
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1.1k
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Considering that the basal expression level is not 0 for the calculation of the differential expression
DESEQ2 RNA-Seq Differential-gene-Expression
updated 5 weeks ago by 43k • written 5.8 years ago by ▴ 340
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1
reply
1.1k
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Plotting diff methylated regions along genes, island information?
methylation plots R
5.8 years ago by Pin.Bioinf ▴ 340
1
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0
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1.4k
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Answer: A: common genes between DMRs and DEGs
5.9 years ago by Pin.Bioinf ▴ 340
0
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0
replies
606
views
Correlations 5hmC 5mC Spearmann significance
methylation rnaseq
updated 5.9 years ago by 20 • written 6.0 years ago by ▴ 340
0
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0
replies
823
views
How to check for a variant (like *3) in public HepG2 cell line?
variants mutations HepG2
5.9 years ago by Pin.Bioinf ▴ 340
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2
replies
1.3k
views
PLot betavalues many cpgs for conditions
betavalues plots
updated 6.0 years ago by 88k • written 6.1 years ago by ▴ 340
1
vote
1
reply
917
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Do all genes have a similar distributions of CpG sites across regions?
methylation
updated 6.0 years ago by 104k • written 6.0 years ago by ▴ 340
0
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0
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759
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Building a classifier model for sub tumours?
RNA-Seq model software error
6.0 years ago by Pin.Bioinf ▴ 340
0
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1
reply
1.2k
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Comment: C: expression and methylation integration
6.0 years ago by Pin.Bioinf ▴ 340
2
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3
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1.2k
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expression and methylation integration
cluster omics integration r
6.0 years ago by Pin.Bioinf ▴ 340
0
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0
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1.8k
views
Comment: C: Help with heatmap
6.0 years ago by Pin.Bioinf ▴ 340
9
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16
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1.8k
views
Help with heatmap
heatmap r expression rpkm
updated 6.0 years ago by ★ 2.2k • written 6.0 years ago by ▴ 340
0
votes
2
replies
1.5k
views
Plotting genomic features ggplot or others
R ggplot2 genomic features betavalues
updated 6.0 years ago by 20 • written 6.1 years ago by ▴ 340
1
vote
0
replies
1.1k
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Finding partially methylated domains starting from Illumina 450K IDAT files
metylation illumina450 R
6.1 years ago by Pin.Bioinf ▴ 340
0
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0
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1.6k
views
iClusterPlus no significant results
RNA-Seq Methyl-Seq data integration omics
6.1 years ago by Pin.Bioinf ▴ 340
1
vote
2
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1.9k
views
plotting genomics tool, how can I get an image like this one?
plot rnaseq methyl chipseq
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 340
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0
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1.1k
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Comment: C: histone marks in my methylation data
6.1 years ago by Pin.Bioinf ▴ 340
0
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1
reply
1.1k
views
Comment: C: histone marks in my methylation data
6.1 years ago by Pin.Bioinf ▴ 340
0
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0
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1.1k
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Comment: C: histone marks in my methylation data
6.1 years ago by Pin.Bioinf ▴ 340
0
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1
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1.1k
views
Comment: C: histone marks in my methylation data
6.1 years ago by Pin.Bioinf ▴ 340
0
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7
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1.1k
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histone marks in my methylation data
R methyl histone
6.1 years ago by Pin.Bioinf ▴ 340
0
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1
reply
1.2k
views
fantom5 enhancers GRCh38
enhancers genomics coordinates r fantom5
6.1 years ago by Pin.Bioinf ▴ 340
3
votes
1
reply
2.5k
views
Nucleotide positions to chromosome positions
genome nucleotides notation
6.1 years ago by Pin.Bioinf ▴ 340
0
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1
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1.8k
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How can I find the region coordinates of my methylation EPIC Illumina data?
Methylation Manifest RNA-Seq EPIC
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 340
127 results • Page 2 of 3
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