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2
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1
reply
2.8k
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Meaning of stat values in DESeq2 result
DESeq2
updated 6 months ago by 43k • written 13 months ago by ▴ 20
0
votes
0
replies
341
views
WGS trimming end of the reads for specific bp before alignment and call somatic variants
read trim WGS somatic variant
18 months ago by woongjaej ▴ 20
1
vote
2
replies
570
views
Curious about way to start scRNA-seq analysis and machine learning using gene expression data
learning python cell single RNA-seq R machine
22 months ago by woongjaej ▴ 20
0
votes
0
replies
350
views
How can I understand aggregate in FAN-C tool using Hi-C data?
Hi-C TAD FAN-C aggregate fanc
22 months ago by woongjaej ▴ 20
1
vote
1
reply
2.1k
views
How to analysis 4c seq 3c seq data
3c seq 4c seq alignment
updated 3.0 years ago by ▴ 190 • written 6.1 years ago by ▴ 20
3
votes
5
replies
2.1k
views
What does DESeq2 non symmetric MA plot mean in differential analysis?? (hi-chip)
Hi-ChIP DESeq2 MA plot differential analysis
updated 3.2 years ago by 82k • written 3.3 years ago by ▴ 20
1
vote
2
replies
2.2k
views
mapping rate of small rna-seq with different references
smRNA-seq mapping rate reference
22 months ago by woongjaej ▴ 20
2
votes
10
replies
4.5k
views
DESeq2 DEG analysis using different sequencing depth data
deseq2 RNA-Seq sequencing depth DEG
updated 5.5 years ago by 35k • written 5.5 years ago by ▴ 20
0
votes
0
replies
1.2k
views
qualimap transcript coverage profile truncated in smRNA-seq( ENCODE PIPELINE)
qaulimap2 smRNA-seq STAR
5.8 years ago by woongjaej ▴ 20
1
vote
2
replies
994
views
sequencing of control sample in ChIP-seq??
ChIP-Seq sequencing
updated 5.9 years ago by 104k • written 5.9 years ago by ▴ 20
0
votes
6
replies
2.7k
views
Are merged bam files and merge fastq file -> bam files same?
sequencing bam merge
updated 6.1 years ago by 104k • written 6.1 years ago by ▴ 20
0
votes
2
replies
3.2k
views
Cutadapt using issue
cutadapt trimming trim_galore
updated 6.2 years ago by 20 • written 6.4 years ago by ▴ 20
0
votes
5
replies
3.9k
views
smRNA-seq adapter trimming cutadapt
cutadapt smRNA-seq trimming Illumina
6.3 years ago by woongjaej ▴ 20
1
vote
4
replies
4.0k
views
trimming RNA-seq reads with adapter sequence?index? using trimmomatic
RNA-Seq trimmomatic adapter trim
updated 6.4 years ago by ▴ 830 • written 6.4 years ago by ▴ 20
0
votes
3
replies
2.9k
views
Identify differentially expressed genes in scatter plot
RNA-Seq scatter plot DEG
updated 6.4 years ago by ▴ 990 • written 6.4 years ago by ▴ 20
1
vote
4
replies
1.6k
views
occupancy at common specific TF binding sites
ChIP-Seq R peak density bins
updated 6.4 years ago by 87k • written 6.4 years ago by ▴ 20
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