User: pablo

0

votes

4

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359

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phylogeny tree raxml

18 days ago by pablo ▴ 300

0

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0

replies

161

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GC bam deepTools GCbias

7 weeks ago by pablo ▴ 300

3

votes

4

replies

331

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seqkit fasta

updated 7 weeks ago by Ram 43k • written 7 weeks ago by pablo ▴ 300

2

votes

7

replies

512

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snp vcftools vcf bcftools

updated 11 weeks ago by Pierre Lindenbaum 161k • written 11 weeks ago by pablo ▴ 300

4

votes

3

replies

497

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awk

updated 6 months ago by Ram 43k • written 6 months ago by pablo ▴ 300

0

votes

3

replies

777

views

dada2 phyloseq 16S asv

updated 6 months ago by antonioggsousa 3.2k • written 6 months ago by pablo ▴ 300

5

votes

11

replies

1.4k

views

variant-calling IGV alignment

updated 8 months ago by cmdcolin ★ 3.8k • written 9 months ago by pablo ▴ 300

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votes

2

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541

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bam align igv

9 months ago by pablo ▴ 300

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0

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293

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alignement blast bam igv

9 months ago by pablo ▴ 300

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1

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638

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variant-calling bam pbsv

updated 10 months ago by Ram 43k • written 10 months ago by pablo ▴ 300

0

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2

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841

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IGV nanopore alignment

updated 13 months ago by prasundutta87 ▴ 660 • written 14 months ago by pablo ▴ 300

0

votes

2

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633

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variants insertion deletion structural assembly

14 months ago by pablo ▴ 300

2

votes

4

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787

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blast yeast

updated 16 months ago by SequenceServer ▴ 20 • written 16 months ago by pablo ▴ 300

3

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31

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4.1k

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bam variant samtools

21 months ago by pablo ▴ 300

3

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7

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1.5k

views

fasta biopython

23 months ago by pablo ▴ 300

0

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6

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987

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assembly

23 months ago by pablo ▴ 300

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0

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335

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fusiongenes isoseq breakpoint pacbio rnaseq

2.2 years ago by pablo ▴ 300

3

votes

4

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833

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biopython python

updated 2.3 years ago by cpad0112 21k • written 2.3 years ago by pablo ▴ 300

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1

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558

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Genbank

updated 2.5 years ago by lieven.sterck 15k • written 2.5 years ago by pablo ▴ 300

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0

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997

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prodigal annotation prokaryote eggNOG-mapper

2.5 years ago by pablo ▴ 300

0

votes

1

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1.5k

views

repeatmasker repeatmodeler

updated 2.5 years ago by Juke34 8.6k • written 2.5 years ago by pablo ▴ 300

1

vote

1

reply

2.3k

views

kmer Assembly pacbio purge_dups

updated 2.9 years ago by kamiljaron ▴ 220 • written 3.4 years ago by pablo ▴ 300

1

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4

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1.1k

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blast

3.0 years ago by pablo ▴ 300

3

votes

5

replies

1.3k

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pacbio purge_dups Assembly bionano

updated 7 months ago by colindaven 6.4k • written 3.3 years ago by pablo ▴ 300

1

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5

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1.2k

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denovo alignment smrttools

3.3 years ago by pablo ▴ 300

5

votes

3

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1.2k

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kmer distribution kmer Assembly

updated 3.4 years ago by Mensur Dlakic ★ 27k • written 3.4 years ago by pablo ▴ 300

1

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9

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1.2k

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gff igv transcripts

3.5 years ago by pablo ▴ 300

0

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1

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684

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alignement bam

updated 3.5 years ago by JC 13k • written 3.5 years ago by pablo ▴ 300

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3

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2.0k

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vcf gatk phasing

3.5 years ago by pablo ▴ 300

1

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1

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1.1k

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dotplot dgenies

3.6 years ago by pablo ▴ 300

0

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7

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3.7k

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hicanu pacbio ccs

3.7 years ago by pablo ▴ 300

0

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2

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846

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sequencing counts genometools pacbio bam

updated 3.7 years ago by Biostar 20 • written 3.8 years ago by pablo ▴ 300

0

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2

replies

1.1k

views

Assembly pacbio illumina

3.7 years ago by pablo ▴ 300

0

votes

3

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1.6k

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hifiasm alignment

3.7 years ago by pablo ▴ 300

2

votes

5

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2.8k

views

fastq samtools

updated 3.8 years ago by GenoMax 142k • written 3.8 years ago by pablo ▴ 300

0

votes

1

reply

907

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pacbio RNA-Seq assembly canu hifiasm

updated 3.8 years ago by colindaven 6.4k • written 3.8 years ago by pablo ▴ 300

1

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7

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1.5k

views

pacbio demultiplexing barcodes sequel

3.8 years ago by pablo ▴ 300

2

votes

3

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1.4k

views

pacbio smrttools smrtlink

updated 3.8 years ago by GenoMax 142k • written 3.8 years ago by pablo ▴ 300

0

votes

7

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936

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fastqc html gitlab markdown

updated 3.8 years ago by Pierre Lindenbaum 161k • written 3.8 years ago by pablo ▴ 300

34

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15

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8.4k

views

6 follow

salmon quasi-mapping

updated 4.0 years ago by biochemistry-tehran • 0 • written 5.7 years ago by pablo ▴ 300

2

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10

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5.9k

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checkm

updated 3.1 years ago by lagartija ▴ 160 • written 4.7 years ago by pablo ▴ 300

1

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15

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1.5k

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correlation igraph

updated 4.7 years ago by Biostar 20 • written 4.9 years ago by pablo ▴ 300

3

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17

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3.6k

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checkm contamination fasta

updated 4.9 years ago by Asaf 10k • written 4.9 years ago by pablo ▴ 300

3

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5

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1.7k

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r network community igraph

updated 4.9 years ago by Jean-Karim Heriche 27k • written 4.9 years ago by pablo ▴ 300

4

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2

replies

1.3k

views

compositional logratio microbiology

updated 4.9 years ago by Asaf 10k • written 4.9 years ago by pablo ▴ 300

0

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0

replies

883

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igraph otu gene network

4.9 years ago by pablo ▴ 300

0

votes

10

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1.4k

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igraph correlation network

5.0 years ago by pablo ▴ 300

0

votes

5

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2.7k

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r slurm matrix

5.0 years ago by pablo ▴ 300

1

vote

18

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1.9k

views

6 follow

correlation matrix slurm parallelization

updated 5.1 years ago by Jean-Karim Heriche 27k • written 5.1 years ago by pablo ▴ 300

2

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21

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4.1k

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correlation R matrix foreach

updated 5.1 years ago by Ram 43k • written 5.1 years ago by pablo ▴ 300