User: pablo

1

vote

1

reply

361

views

vcf vcftools

updated 4 months ago by Pierre Lindenbaum 166k • written 4 months ago by pablo ▴ 350

2

votes

5

replies

1000

views

snp bcftools vcf vcftools

5 months ago by pablo ▴ 350

1

vote

4

replies

913

views

samtools bam bedtools coverage

9 months ago by pablo ▴ 350

15

votes

8

replies

3.2k

views

quality fastqc

updated 11 months ago by BioinfGuru ★ 2.1k • written 11 months ago by pablo ▴ 350

0

votes

4

replies

1.0k

views

phylogeny tree raxml

14 months ago by pablo ▴ 350

0

votes

0

replies

407

views

GC bam deepTools GCbias

15 months ago by pablo ▴ 350

3

votes

4

replies

1.1k

views

seqkit fasta

updated 15 months ago by Ram 45k • written 15 months ago by pablo ▴ 350

2

votes

7

replies

1.1k

views

snp vcftools vcf bcftools

updated 16 months ago by Pierre Lindenbaum 166k • written 16 months ago by pablo ▴ 350

4

votes

3

replies

939

views

awk

updated 19 months ago by Ram 45k • written 19 months ago by pablo ▴ 350

0

votes

3

replies

1.7k

views

dada2 phyloseq 16S asv

updated 20 months ago by antonioggsousa 3.2k • written 20 months ago by pablo ▴ 350

5

votes

11

replies

2.6k

views

variant-calling IGV alignment

updated 22 months ago by cmdcolin ★ 4.2k • written 22 months ago by pablo ▴ 350

0

votes

2

replies

857

views

bam align igv

22 months ago by pablo ▴ 350

0

votes

0

replies

466

views

alignement blast bam igv

23 months ago by pablo ▴ 350

0

votes

1

reply

1.1k

views

variant-calling bam pbsv

updated 2.0 years ago by Ram 45k • written 2.0 years ago by pablo ▴ 350

0

votes

2

replies

1.4k

views

IGV nanopore alignment

updated 2.2 years ago by prasundutta87 ▴ 720 • written 2.3 years ago by pablo ▴ 350

0

votes

2

replies

1.0k

views

variants insertion deletion structural assembly

2.3 years ago by pablo ▴ 350

2

votes

4

replies

1.2k

views

blast yeast

updated 2.5 years ago by SequenceServer ▴ 20 • written 2.5 years ago by pablo ▴ 350

3

votes

31

replies

6.1k

views

bam variant samtools

2.9 years ago by pablo ▴ 350

3

votes

7

replies

2.1k

views

fasta biopython

3.0 years ago by pablo ▴ 350

0

votes

6

replies

1.5k

views

assembly

3.0 years ago by pablo ▴ 350

0

votes

0

replies

464

views

fusiongenes isoseq breakpoint pacbio rnaseq

3.3 years ago by pablo ▴ 350

3

votes

4

replies

1.1k

views

biopython python

updated 3.4 years ago by cpad0112 21k • written 3.4 years ago by pablo ▴ 350

0

votes

1

reply

713

views

Genbank

updated 3.6 years ago by lieven.sterck 15k • written 3.6 years ago by pablo ▴ 350

0

votes

0

replies

1.4k

views

prodigal annotation prokaryote eggNOG-mapper

3.6 years ago by pablo ▴ 350

0

votes

1

reply

2.3k

views

repeatmasker repeatmodeler

updated 3.6 years ago by Juke34 9.2k • written 3.6 years ago by pablo ▴ 350

1

vote

1

reply

2.9k

views

kmer Assembly pacbio purge_dups

updated 4.1 years ago by kamiljaron ▴ 230 • written 4.5 years ago by pablo ▴ 350

1

vote

4

replies

1.4k

views

blast

4.1 years ago by pablo ▴ 350

3

votes

5

replies

1.8k

views

pacbio purge_dups Assembly bionano

updated 21 months ago by colindaven 7.6k • written 4.4 years ago by pablo ▴ 350

1

vote

5

replies

1.6k

views

denovo alignment smrttools

4.4 years ago by pablo ▴ 350

5

votes

3

replies

1.6k

views

kmer distribution kmer Assembly

updated 4.5 years ago by Mensur Dlakic ★ 29k • written 4.5 years ago by pablo ▴ 350

1

vote

9

replies

1.7k

views

gff igv transcripts

4.6 years ago by pablo ▴ 350

0

votes

1

reply

951

views

alignement bam

updated 4.6 years ago by JC 13k • written 4.6 years ago by pablo ▴ 350

0

votes

3

replies

2.4k

views

vcf gatk phasing

4.6 years ago by pablo ▴ 350

1

vote

1

reply

1.3k

views

dotplot dgenies

4.8 years ago by pablo ▴ 350

0

votes

7

replies

4.8k

views

hicanu pacbio ccs

4.8 years ago by pablo ▴ 350

0

votes

2

replies

1.1k

views

sequencing counts genometools pacbio bam

updated 4.8 years ago by Biostar 20 • written 4.9 years ago by pablo ▴ 350

0

votes

2

replies

1.3k

views

Assembly pacbio illumina

4.8 years ago by pablo ▴ 350

0

votes

3

replies

1.9k

views

hifiasm alignment

4.8 years ago by pablo ▴ 350

2

votes

5

replies

3.5k

views

fastq samtools

updated 4.9 years ago by GenoMax 151k • written 4.9 years ago by pablo ▴ 350

0

votes

1

reply

1.1k

views

pacbio RNA-Seq assembly canu hifiasm

updated 4.9 years ago by colindaven 7.6k • written 4.9 years ago by pablo ▴ 350

1

vote

7

replies

2.0k

views

pacbio demultiplexing barcodes sequel

4.9 years ago by pablo ▴ 350

2

votes

3

replies

2.6k

views

pacbio smrttools smrtlink

updated 4.9 years ago by GenoMax 151k • written 4.9 years ago by pablo ▴ 350

0

votes

7

replies

1.4k

views

fastqc html gitlab markdown

updated 5.0 years ago by Pierre Lindenbaum 166k • written 5.0 years ago by pablo ▴ 350

35

votes

15

replies

10k

views

6 follow

salmon quasi-mapping

updated 5.1 years ago by biochemistry-tehran • 0 • written 6.9 years ago by pablo ▴ 350

2

votes

10

replies

7.8k

views

checkm

updated 4.2 years ago by lagartija ▴ 160 • written 5.8 years ago by pablo ▴ 350

1

vote

15

replies

2.2k

views

correlation igraph

updated 5.9 years ago by Biostar 20 • written 6.0 years ago by pablo ▴ 350

3

votes

17

replies

4.8k

views

checkm contamination fasta

updated 6.0 years ago by Asaf 10k • written 6.0 years ago by pablo ▴ 350

3

votes

5

replies

2.2k

views

r network community igraph

updated 6.0 years ago by Jean-Karim Heriche 27k • written 6.0 years ago by pablo ▴ 350

4

votes

2

replies

1.7k

views

compositional logratio microbiology

updated 6.0 years ago by Asaf 10k • written 6.0 years ago by pablo ▴ 350

0

votes

0

replies

1.1k

views

igraph otu gene network

6.0 years ago by pablo ▴ 350