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Showing :
questions
0
votes
14
replies
2.1k
views
Error using HTSEq_count
HTSeq
python
16 months ago by
felipead66
▴ 120
0
votes
0
replies
397
views
Error using dexseq_counts.py
dexseq_counts
rnaseq
16 months ago by
felipead66
▴ 120
0
votes
3
replies
1.5k
views
gene body coverage interpretation
rna-seq
coverage
updated 2.3 years ago by
Carlo Yague
8.7k • written 2.4 years ago by
felipead66
▴ 120
0
votes
2
replies
776
views
How to check if there is 3' bias
rna-seq
updated 23 months ago by
Ram
43k • written 2.4 years ago by
felipead66
▴ 120
0
votes
3
replies
717
views
Tripal Fancy Fields
tripal
updated 2.9 years ago by
Kevin Blighe
88k • written 2.9 years ago by
felipead66
▴ 120
0
votes
0
replies
385
views
Image as Tripal footer
tripal
database
footer
2.9 years ago by
felipead66
▴ 120
1
vote
0
replies
397
views
Tripal insert menu items
tripal
2.9 years ago by
felipead66
▴ 120
0
votes
1
reply
553
views
PCA and bar plot in Tripal
tripal
plots
updated 3.0 years ago by
zx8754
11k • written 3.0 years ago by
felipead66
▴ 120
0
votes
6
replies
1.1k
views
Delete Biosamples and Organism in Tripal
database
tripal
updated 20 months ago by
1105123513
• 0 • written 3.0 years ago by
felipead66
▴ 120
0
votes
0
replies
473
views
Geno Ontology loader in Tripal
Tripal
database
GO
3.0 years ago by
felipead66
▴ 120
0
votes
8
replies
1.5k
views
Upload data in tripal
database
tripal
3.0 years ago by
felipead66
▴ 120
1
vote
6
replies
992
views
RNASeq datasets with different total counts
normalization
RNA-seq
updated 8 months ago by
Ram
43k • written 3.2 years ago by
felipead66
▴ 120
0
votes
1
reply
592
views
Implement blast on a database
blast
database
custom
3.6 years ago by
felipead66
▴ 120
0
votes
1
reply
1.1k
views
Calculate enrichment factor from a list of GO terms
R
GO
enrichment factor
4.0 years ago by
felipead66
▴ 120
0
votes
1
reply
794
views
RNA Seq data distribution
RNA-seq
deseq2
updated 8 months ago by
Ram
43k • written 4.0 years ago by
felipead66
▴ 120
2
votes
2
replies
623
views
Cannot find a gene in the counts table
RNA-Seq
4.1 years ago by
felipead66
▴ 120
4
votes
2
replies
3.5k
views
RNA seq library size
rnaseq
counts
4.4 years ago by
felipead66
▴ 120
2
votes
2
replies
788
views
Linkage disequilibrium with one sample
ld
plink19
updated 4.4 years ago by
chrchang523
10k • written 4.4 years ago by
felipead66
▴ 120
1
vote
2
replies
2.3k
views
lumpy for cnv detection
cnv
lumpy
4.4 years ago by
felipead66
▴ 120
3
votes
2
replies
710
views
Which statistical test to use for two groups of patients?
RNA-Seq
statistics
two_groups
updated 4.4 years ago by
ATpoint
82k • written 4.4 years ago by
felipead66
▴ 120
0
votes
0
replies
905
views
HTSeq error about gene_id
htseq
non-model
gene_id
4.5 years ago by
felipead66
▴ 120
1
vote
1
reply
2.0k
views
HTSeq pip installation in Ubuntu
htseq
ubuntu
updated 4.5 years ago by
Mensur Dlakic
★ 27k • written 4.5 years ago by
felipead66
▴ 120
1
vote
7
replies
2.3k
views
wgcna annotation file for human data
wgcna
modules
annotation
updated 4.5 years ago by
Kevin Blighe
88k • written 4.5 years ago by
felipead66
▴ 120
2
votes
0
replies
1.8k
views
Linkage disequilibrium from multi-sample vcf file
ld
vcf
snpeff
vcftools
updated 4.9 years ago by
Ram
43k • written 4.9 years ago by
felipead66
▴ 120
2
votes
1
reply
894
views
fasta sequences from snpeff output file
snpeff
fasta
5.0 years ago by
felipead66
▴ 120
3
votes
4
replies
1.2k
views
Chromosomal length prunus dulcis
chromosomes
length
non-model
updated 5.0 years ago by
AK
★ 2.2k • written 5.0 years ago by
felipead66
▴ 120
0
votes
8
replies
2.0k
views
snpEff output gets zero results for synonymous SNPs
snpEff
synonymous
updated 5.0 years ago by
finswimmer
16k • written 5.0 years ago by
felipead66
▴ 120
1
vote
3
replies
916
views
In which step should plink be used?
plink
snps
updated 5.0 years ago by
WouterDeCoster
47k • written 5.0 years ago by
felipead66
▴ 120
1
vote
2
replies
1.6k
views
Summary from a vcf file
snps
vcf
updated 5.1 years ago by
Arup Ghosh
3.2k • written 5.1 years ago by
felipead66
▴ 120
1
vote
6
replies
3.2k
views
7 follow
What to do after differential expression
RNA-Seq
updated 5.1 years ago by
EagleEye
7.5k • written 5.1 years ago by
felipead66
▴ 120
1
vote
0
replies
824
views
Error in snphylo
snplylo
snps
updated 5.1 years ago by
zx8754
11k • written 5.1 years ago by
felipead66
▴ 120
1
vote
3
replies
1.2k
views
snp identification with Haplotypecaller and SelectVariants
SNP
gatk
updated 5.2 years ago by
Pierre Lindenbaum
161k • written 5.2 years ago by
felipead66
▴ 120
6
votes
7
replies
4.7k
views
VariantFiltration warning "undefined variable"
gatk
variantfiltration
updated 16 months ago by
Ram
43k • written 5.2 years ago by
felipead66
▴ 120
0
votes
7
replies
8.4k
views
Bio-DB-HTS installation and ensembl-vep
Bio-DB-HTS
ensembl
vep
updated 2.8 years ago by
al.bodrug
▴ 50 • written 5.2 years ago by
felipead66
▴ 120
1
vote
4
replies
1.8k
views
Annovar annotation for plants
annovar
plants
updated 5.3 years ago by
Vitis
★ 2.5k • written 5.3 years ago by
felipead66
▴ 120
35 results • Page
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