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2
votes
1
reply
1.3k
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Plink to bimbam format for gemma-wrapper
gemma
updated 2.2 years ago by • 0 • written 2.8 years ago by ▴ 330
3
votes
4
replies
1.9k
views
6 follow
Segmentation fault in bcftools while changing the sample names
vcftools bcftools
updated 3.3 years ago by 145k • written 3.5 years ago by ▴ 330
0
votes
0
replies
1.8k
views
Comment: Comment: How to calculate frequency of heterozygous SNPs in multisample VCF file and to
3.4 years ago by kumar.vinod81 ▴ 330
0
votes
2
replies
1.8k
views
How to calculate frequency of heterozygous SNPs in multisample VCF file and to filter out over a specific range?
bcftools vcftools
3.4 years ago by kumar.vinod81 ▴ 330
3
votes
0
replies
1.9k
views
Answer: Answer: Segmentation fault in bcftools while changing the sample names
3.5 years ago by kumar.vinod81 ▴ 330
2
votes
1
reply
2.2k
views
How to speed up the GenotypeGVCF?
GenotypeGVCF GATK
updated 3.8 years ago by 163k • written 3.8 years ago by ▴ 330
1
vote
8
replies
3.0k
views
SNPRelate; Plot looking blank
SNPRelate
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 330
0
votes
2
replies
3.5k
views
Phenotypic Variation Explained By Snps In Gwas
snp
updated 5.0 years ago by 20 • written 11.9 years ago by ▴ 330
0
votes
0
replies
2.0k
views
Interpretation for regression coeffecient and T statistics from haplotype association in PLINK
haplotype association
updated 5.4 years ago by 20 • written 8.4 years ago by ▴ 330
3
votes
1
reply
2.0k
views
Is Re-Sequencing Of Trait-Associated-Regions Required To Capture The Causal Variant?
variant snp
updated 5.5 years ago by 20 • written 11.5 years ago by ▴ 330
0
votes
0
replies
1.7k
views
Estimation of haplotype block frequency and phylogentic analysis
hapltype frequency estimation phylogenetic tree
updated 5.8 years ago by 20 • written 9.1 years ago by ▴ 330
0
votes
0
replies
5.7k
views
Comment: C: Phenotypic Variation Explained By Snps In Gwas
5.9 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
814
views
phenotypic variance explained by non-additive model in GenABEL
gwas non-additive model
5.9 years ago by kumar.vinod81 ▴ 330
0
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1
reply
5.7k
views
Comment: C: Phenotypic Variation Explained By Snps In Gwas
5.9 years ago by kumar.vinod81 ▴ 330
0
votes
1
reply
1.5k
views
Answer: A: recode SNPs ATGC illumina
6.2 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
921
views
VIFGC_ovedom function in GenABEL
Genabel non-additive models
6.2 years ago by kumar.vinod81 ▴ 330
1
vote
1
reply
2.1k
views
Simulation in quantitative genetics, mapping and gwas
gwas simulation
8.2 years ago by kumar.vinod81 ▴ 330
1
vote
1
reply
2.3k
views
Boxplot of phenotype~SNP1:SNP2
SNP boxplot
8.3 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
2.5k
views
Comment: C: haplotype association with quantitative traits
8.4 years ago by kumar.vinod81 ▴ 330
0
votes
2
replies
2.5k
views
haplotype association with quantitative traits
GWAS haplotype
updated 8.4 years ago by ★ 1.0k • written 8.4 years ago by ▴ 330
1
vote
0
replies
3.0k
views
Comment: C: Data format to produces a heatmap like this
8.9 years ago by kumar.vinod81 ▴ 330
0
votes
1
reply
1.7k
views
Is academic license for fastPHASE disabled?
fastPHASE
updated 2.0 years ago by 44k • written 9.0 years ago by ▴ 330
3
votes
1
reply
2.0k
views
GenABEL: missing sex in plant gwas
genabel gwas
updated 2.3 years ago by 44k • written 9.4 years ago by ▴ 330
2
votes
0
replies
2.7k
views
How to start a SNP prioritization in GWAS
gwas snp-prioritization
updated 19 months ago by 44k • written 9.4 years ago by ▴ 330
0
votes
1
reply
2.0k
views
FastPhase:Output file not written in the specified folder
fastphase
updated 9.4 years ago by 20 • written 9.4 years ago by ▴ 330
1
vote
1
reply
3.8k
views
fastPHASE output format to PLINK input format
PLINK fastPHASE
updated 18 months ago by 44k • written 9.4 years ago by ▴ 330
0
votes
0
replies
3.1k
views
Comment: C: combining gds files into one gds file
9.4 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
1.9k
views
Comment: C: Can SNP arrays distinguish 3 different alleles at a certain position?
9.4 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
8.1k
views
Comment: Comment: ROH by PLINK
updated 19 months ago by 44k • written 9.4 years ago by ▴ 330
0
votes
0
replies
5.1k
views
Comment: Comment: PED & MAP file extension
updated 19 months ago by 44k • written 9.4 years ago by ▴ 330
10
votes
4
replies
7.0k
views
Need Recommendation On Good Tutorials For Performing Gwas
gwas
updated 18 months ago by 44k • written 11.5 years ago by ▴ 330
3
votes
2
replies
3.2k
views
SNPRelate: how to give specific color to a population in PCA plot
SNPRelate
updated 2.3 years ago by 44k • written 9.5 years ago by ▴ 330
0
votes
0
replies
7.3k
views
Comment: Comment: how can I make input file for Haploview from Output files of inferred haplotypes
updated 2.9 years ago by 44k • written 10.0 years ago by ▴ 330
0
votes
1
reply
7.3k
views
Comment: Comment: how can I make input file for Haploview from Output files of inferred haplotypes
updated 2.9 years ago by 44k • written 10.0 years ago by ▴ 330
0
votes
0
replies
1.8k
views
Comment: Comment: generating MAP input file
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 330
0
votes
1
reply
3.0k
views
Comment: C: SNPRelate; Plot looking blank
10.1 years ago by kumar.vinod81 ▴ 330
0
votes
1
reply
3.0k
views
Comment: Comment: SNPRelate; Plot looking blank
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 330
0
votes
1
reply
3.0k
views
Comment: Comment: SNPRelate; Plot looking blank
updated 2.8 years ago by 44k • written 10.1 years ago by ▴ 330
0
votes
0
replies
2.0k
views
Haplotype based NJ tree to have more accurate about subpopulations
haplotype
10.1 years ago by kumar.vinod81 ▴ 330
0
votes
1
reply
1.7k
views
Imputation using MACH 1.0
SNP-Imputation
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 330
0
votes
3
replies
2.3k
views
Any Tool Which Remark The Boundries Like Regulatory, Intron And Exon In Gene Sequence
utr gene exon
updated 14 months ago by 44k • written 11.5 years ago by ▴ 330
2
votes
1
reply
3.0k
views
Plink --Update-Alleles Command Is Not Resulting In Right Way
plink command-line
updated 10.4 years ago by 20 • written 11.5 years ago by ▴ 330
0
votes
1
reply
4.2k
views
Comment: C: How To Calculate Recombination Rate From R^2 Data?
10.5 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
2.2k
views
Association Mapping: Can Mlm Find More Association Than Glm?
10.5 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
4.0k
views
Haplotype Reconstruction And Gwas For Quantitative Traits In Plants
gwas
updated 10.6 years ago by 20 • written 11.5 years ago by ▴ 330
0
votes
0
replies
8.2k
views
Answer: A: Imputation Without A Reference Panel
10.6 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
9.7k
views
Comment: C: Arlequin Input Format
10.6 years ago by kumar.vinod81 ▴ 330
0
votes
0
replies
8.2k
views
Comment: C: What Does Bed Stand For?
10.6 years ago by kumar.vinod81 ▴ 330
0
votes
1
reply
9.7k
views
Answer: A: Arlequin Input Format
10.6 years ago by kumar.vinod81 ▴ 330
1
vote
0
replies
4.4k
views
Answer: A: Gwas: Adjust For Population Stratification In Impute2 Output
10.7 years ago by kumar.vinod81 ▴ 330
107 results • Page 1 of 3
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