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0
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1
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1.0k
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overlay of DE data on reactome pathway
pathway
updated 2.7 years ago by
Ram
44k • written 4.9 years ago by
kanwarjag
★ 1.2k
12
votes
2
replies
2.3k
views
Single cell RNA-seq anlaysis
RNA-Seq
updated 3.9 years ago by
jared.andrews07
★ 18k • written 7.2 years ago by
kanwarjag
★ 1.2k
2
votes
4
replies
824
views
SCRNA-seq experiment reads
RNA-Seq
updated 4.1 years ago by
lieven.sterck
15k • written 4.1 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
824
views
Comment:
A: SCRNA-seq experiment reads
4.1 years ago by
kanwarjag
★ 1.2k
3
votes
4
replies
5.7k
views
RNA-Seq Cell Barcode Whitelist 10X
RNA-Seq
updated 4.1 years ago by
mathieu.bahin
▴ 90 • written 4.2 years ago by
kanwarjag
★ 1.2k
0
votes
2
replies
1.6k
views
extracting count matrix from default cell ranger files
RNA-Seq
updated 4.1 years ago by
ATpoint
85k • written 4.1 years ago by
kanwarjag
★ 1.2k
1
vote
1
reply
597
views
merging bam from two samples
alignment
updated 4.2 years ago by
GenoMax
148k • written 4.2 years ago by
kanwarjag
★ 1.2k
2
votes
2
replies
1.4k
views
sequencing depth in ScRNASeq
RNA-Seq
updated 4.2 years ago by
rob.costa1234
▴ 310 • written 5.8 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
855
views
aligning 5' seq with - white list file
alignment
updated 4.2 years ago by
Kevin Blighe
88k • written 4.2 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
1.1k
views
Comment:
C: sparse peak calling
4.2 years ago by
kanwarjag
★ 1.2k
0
votes
4
replies
1.1k
views
sparse peak calling
ChIP-Seq
updated 4.2 years ago by
AS
• 0 • written 4.2 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
918
views
SCRNA-seq experiment reads
RNA-Seq
4.2 years ago by
kanwarjag
★ 1.2k
0
votes
2
replies
2.1k
views
GTF/GFF3 file compatible with (GRCh38/hg38)(hg38)
RNA-Seq
4.2 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
7.4k
views
Comment:
C: STARsolo config for 10x Chromium v1, v2, v3
4.2 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
7.4k
views
Comment:
C: STARsolo config for 10x Chromium v1, v2, v3
4.2 years ago by
kanwarjag
★ 1.2k
6
votes
8
replies
6.4k
views
normalization in single cell RNAseq
RNA-Seq
updated 4.2 years ago by
ATpoint
85k • written 5.8 years ago by
kanwarjag
★ 1.2k
2
votes
2
replies
794
views
Saving results from GREAT
ChIP-Seq
GREAT
updated 4.3 years ago by
jared.andrews07
★ 18k • written 4.3 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
729
views
ncRNA pathway analysis
pathway
ncRNA
4.3 years ago by
kanwarjag
★ 1.2k
2
votes
1
reply
1.1k
views
pdb figure download in SVG
protein
pdb
4.3 years ago by
kanwarjag
★ 1.2k
0
votes
2
replies
652
views
Question about deeptools
ChIP-Seq
4.3 years ago by
kanwarjag
★ 1.2k
3
votes
1
reply
1.8k
views
Unique interval among two bed files
ChIP-Seq
updated 4.3 years ago by
rpolicastro
13k • written 4.3 years ago by
kanwarjag
★ 1.2k
2
votes
7
replies
2.5k
views
6 follow
checking overlap between two genomic coordinates
ChIP-Seq
updated 4.3 years ago by
Tm
★ 1.1k • written 4.3 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
829
views
Comment:
C: Out put of sequencers
4.3 years ago by
kanwarjag
★ 1.2k
0
votes
3
replies
829
views
Out put of sequencers
next-gen
updated 4.3 years ago by
GenoMax
148k • written 4.3 years ago by
kanwarjag
★ 1.2k
0
votes
2
replies
944
views
RNA-seq and histone modifictaion
rna-seq
updated 4.4 years ago by
science_lizard
▴ 20 • written 4.4 years ago by
kanwarjag
★ 1.2k
6
votes
5
replies
2.7k
views
Cell type pathway ScRNAseq
RNAseq
Pathways
updated 4.5 years ago by
jared.andrews07
★ 18k • written 4.5 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
2.7k
views
Comment:
C: Cell type pathway ScRNAseq
4.5 years ago by
kanwarjag
★ 1.2k
1
vote
2
replies
691
views
alternative Pathway analysis
pathway
list of genes
4.6 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
665
views
Comment:
C: Denovo RNA seq
4.6 years ago by
kanwarjag
★ 1.2k
1
vote
2
replies
665
views
Denovo RNA seq
rna-seq
4.6 years ago by
kanwarjag
★ 1.2k
1
vote
3
replies
1.2k
views
survival curve for a specific gene in T-cell acute lymphoblastic leukaemia
survival curve
updated 4.7 years ago by
giulia_m
• 0 • written 5.6 years ago by
kanwarjag
★ 1.2k
3
votes
4
replies
1.5k
views
GSEA analaysis understaning
pathway
4.7 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
798
views
Single Cell RNAseq of nuclei
RNA-Seq
4.8 years ago by
kanwarjag
★ 1.2k
0
votes
3
replies
1.1k
views
cell ranger tool
RNA-Seq
updated 4.8 years ago by
hirad.alipanah
▴ 10 • written 4.8 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
2.8k
views
Comment:
C: Z score and FC
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
2.8k
views
Comment:
C: Z score and FC
4.9 years ago by
kanwarjag
★ 1.2k
1
vote
5
replies
2.8k
views
Z score and FC
RNA-Seq
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
4.3k
views
Answer:
A: what to do after pseudotime analysis by Monocle?
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
643
views
question about moncole 2/3
RNA-Seq
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
707
views
GUI based Trajectory tool for RNA-seq
RNA-Seq
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
4.8k
views
Comment:
C: chipseq data normalization
updated 4.9 years ago by
Ram
44k • written 10.5 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
2.7k
views
Comment:
C: logistic regression subset data
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
962
views
filtering of genes before unsupervized analysis
gene expression
4.9 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
1.8k
views
Comment:
C: chipseq over various genomic locations
updated 4.9 years ago by
Ram
44k • written 10.6 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
2.6k
views
Comment:
A: variant calls which are important
updated 4.9 years ago by
Ram
44k • written 10.6 years ago by
kanwarjag
★ 1.2k
0
votes
1
reply
9.0k
views
Comment:
C: heatmap for a predetermined order of rows
updated 4.9 years ago by
Ram
44k • written 8.9 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
3.5k
views
Comment:
A: filtering a VCF file
updated 4.9 years ago by
Ram
44k • written 10.6 years ago by
kanwarjag
★ 1.2k
0
votes
2
replies
14k
views
Comment:
A: Plotting Read Density/ Distribution/ Composite Profiles [Chip-Seq]
updated 5.0 years ago by
Ram
44k • written 10.6 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
4.5k
views
Comment:
C: Tss Distance Vs Chipseq Tag K Mean Clustering
updated 5.0 years ago by
Ram
44k • written 11.6 years ago by
kanwarjag
★ 1.2k
0
votes
0
replies
6.5k
views
Comment:
C: lift-over hg19 to GRch38
updated 5.0 years ago by
Ram
44k • written 9.0 years ago by
kanwarjag
★ 1.2k
371 results • Page
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