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GTR always the best model of evolution
Phylogenetics GTR Nucleotide Evolution Models
updated 4.6 years ago by ▴ 10 • written 10.5 years ago by ▴ 130
6
votes
4
replies
5.2k
views
Infer ancestral sequence from a Multiple Sequence Alignment
sequence Ancestral State reconstruction msa
updated 3.4 years ago by 45k • written 10.8 years ago by ▴ 130
1
vote
2
replies
3.7k
views
Conservation Scores Concept
conservation ucsc
updated 9.4 years ago by ★ 5.2k • written 12.2 years ago by ▴ 130
0
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1
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3.7k
views
Ovals and Rectangles in TCS Haplotype Networks
Haplotype Networks TCS
updated 3.4 years ago by 45k • written 10.9 years ago by ▴ 130
0
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0
replies
7.2k
views
Intuitive explanation for Fu's Fs statistic
Population Genetics Selection Statistic
updated 10.5 years ago by 20 • written 10.7 years ago by ▴ 130
0
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0
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2.5k
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What sample sizes and degree of polymorphism within the samples are ideal for carrying out Bayesian Skyline Plots?
demography population genetics BEAST
10.7 years ago by anuragm ▴ 130
0
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1
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2.8k
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Comment: Comment: What could be the reasons for Bayesian Inference tree having a different topolog
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 130
1
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4
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2.8k
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What could be the reasons for Bayesian Inference tree having a different topology from Maximum Likelihood Tree?
Bayesian Maximum Likelihood Phylogeny
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 130
1
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2
replies
5.0k
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Divergence time estimates using BEAST
BEAST Divergence
updated 10.7 years ago by ★ 3.8k • written 10.7 years ago by ▴ 130
0
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0
replies
3.3k
views
How does Bayesian Skyline plot estimate population size changes through time ?
bayesian population-genetics demography
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 130
0
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0
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8.8k
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Comment: C: Why 4Ne Rather Than 2Ne?
10.7 years ago by anuragm ▴ 130
1
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1
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4.0k
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Ancestral Sequence Reconstruction from Multiple Sequence Alignment using Mesquite
Mesquite Ancestral-State
updated 3.5 years ago by 45k • written 10.7 years ago by ▴ 130
0
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1
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5.2k
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Comment: C: Infer ancestral sequence from a Multiple Sequence Alignment
10.8 years ago by anuragm ▴ 130
9
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13
replies
9.8k
views
Is there a way to access the data stored in a .ab1 file ?
sequence
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 130
0
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1
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5.8k
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Comment: C: What do the fields DATA.9 - DATA.12 represent in an ab1 file ?
10.9 years ago by anuragm ▴ 130
1
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3
replies
5.8k
views
What do the fields DATA.9 - DATA.12 represent in an ab1 file ?
ab1 sequencing chromatogram
updated 10.9 years ago by 7.4k • written 10.9 years ago by ▴ 130
0
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0
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9.8k
views
Comment: Comment: Is there a way to access the data stored in a .ab1 file ?
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 130
0
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1
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9.8k
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Comment: Comment: Is there a way to access the data stored in a .ab1 file ?
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 130
0
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0
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9.8k
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Comment: Comment: Is there a way to access the data stored in a .ab1 file ?
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 130
0
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1
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9.8k
views
Comment: Comment: Is there a way to access the data stored in a .ab1 file ?
updated 3.7 years ago by 45k • written 10.9 years ago by ▴ 130
0
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1
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9.8k
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Comment: C: Is there a way to access the data stored in a .ab1 file ?
10.9 years ago by anuragm ▴ 130
0
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0
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9.8k
views
Comment: C: Is there a way to access the data stored in a .ab1 file ?
10.9 years ago by anuragm ▴ 130
0
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0
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4.9k
views
Comment: C: How to find the diversity of nucleotides in each position of an alignment ?
11.0 years ago by anuragm ▴ 130
6
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3
replies
4.9k
views
How to find the diversity of nucleotides in each position of an alignment ?
dna alignment nucleotide
updated 3.7 years ago by 45k • written 11.0 years ago by ▴ 130
5
votes
1
reply
2.3k
views
Length Of Genome Scaffolds In Ucsc Genome Browser
ucsc
updated 12.1 years ago by 166k • written 12.1 years ago by ▴ 130
0
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1
reply
2.3k
views
Distance Between Homologs Of Genes In Different Vertebrate Taxa
ucsc
updated 12.1 years ago by ▴ 1000 • written 12.1 years ago by ▴ 130
3
votes
1
reply
4.9k
views
Distance Between Genes Of Interest
gene ucsc
updated 12.1 years ago by 105k • written 12.1 years ago by ▴ 130
0
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1
reply
2.1k
views
Multiple Hits In Blat For Hox Genes
gene
updated 12.1 years ago by ▴ 520 • written 12.1 years ago by ▴ 130
1
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2
replies
7.1k
views
Calculating Phastcons And Phylop Scores
conservation
updated 12.2 years ago by 6.1k • written 12.2 years ago by ▴ 130
0
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0
replies
2.6k
views
Missing Data In Conservation Tracks In Ucsc Genome Browser
conservation ucsc
12.2 years ago by anuragm ▴ 130
0
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1
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3.0k
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Comment: C: Entire Alignment Of A Conservation Track In Ucsc
12.2 years ago by anuragm ▴ 130
0
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4
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3.0k
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Entire Alignment Of A Conservation Track In Ucsc
ucsc conservation alignment fasta
updated 12.2 years ago by 36k • written 12.2 years ago by ▴ 130
0
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0
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3.4k
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Comment: C: What Does Gl Mean In Ucsc Genome Browser ?
12.2 years ago by anuragm ▴ 130
2
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5
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3.4k
views
What Does Gl Mean In Ucsc Genome Browser ?
ucsc
updated 12.2 years ago by 23k • written 12.2 years ago by ▴ 130
2
votes
1
reply
1.9k
views
Why Is The Rag Gene Missing In The Ucsc Xenopus Genome?
ucsc
updated 12.2 years ago by 5.3k • written 12.2 years ago by ▴ 130
0
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0
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5.1k
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Comment: C: Downloadable File With Gene Locations
12.2 years ago by anuragm ▴ 130
5
votes
5
replies
5.1k
views
Downloadable File With Gene Locations
gene ucsc annotation
updated 12.2 years ago by 5.1k • written 12.2 years ago by ▴ 130
0
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1
reply
2.3k
views
Ambiguities In Alignment
conservation ucsc alignment
updated 12.2 years ago by 103k • written 12.2 years ago by ▴ 130
2
votes
2
replies
1.7k
views
Blank Spaces In Conservation Tracks
ucsc
updated 12.2 years ago by 49k • written 12.2 years ago by ▴ 130
0
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2
replies
3.8k
views
Phastcons Scores Instead Of Phylop Scores
ucsc
updated 12.2 years ago by 6.1k • written 12.2 years ago by ▴ 130
0
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1
reply
2.4k
views
Genes From Ucsc Genome Browser
gene ucsc
updated 12.2 years ago by 28k • written 12.2 years ago by ▴ 130
0
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0
replies
3.2k
views
Comment: C: Find Nucleotide Sequence Corresponding To Genome Regions
12.2 years ago by anuragm ▴ 130
1
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2
replies
3.2k
views
Find Nucleotide Sequence Corresponding To Genome Regions
ucsc nucleotide sequence fasta
updated 12.2 years ago by 12k • written 12.2 years ago by ▴ 130
5
votes
2
replies
4.0k
views
Getting Sequence Information From Ucsc Genome Browser
genome-browser nucleotide
updated 12.5 years ago by 36k • written 12.5 years ago by ▴ 130
10
votes
6
replies
9.9k
views
Conservation Score Calculator
conservation fasta
updated 12.5 years ago by ★ 3.6k • written 12.5 years ago by ▴ 130
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