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17
votes
15
replies
28k
views
9 follow
Mapping Mouse gene names to Human gene names
RNA-Seq PDX
updated 9 months ago by 40k • written 8.2 years ago by ★ 1.1k
6
votes
6
replies
8.0k
views
Merge vcf files from Multiple Samples
vcftools vcf
updated 21 months ago by • 0 • written 9.4 years ago by ★ 1.1k
6
votes
6
replies
4.0k
views
Clustering of genes using FPKM
RNA-Seq clustering FPKM R bioconductor
updated 3.0 years ago by 3.0k • written 8.8 years ago by ★ 1.1k
1
vote
7
replies
6.6k
views
6 follow
Using Samtools mpileup with Varscan
next-gen RNA-Seq varscan samtools
updated 11 months ago by 40k • written 8.2 years ago by ★ 1.1k
3
votes
2
replies
2.2k
views
Validating Predictions Of Small Insertions / Deletions
gatk variant
updated 3.7 years ago by 20 • written 9.6 years ago by ★ 1.1k
0
votes
0
replies
5.4k
views
Comment: C: Filter overlapping reads in pysam
updated 3.7 years ago by 40k • written 9.3 years ago by ★ 1.1k
0
votes
1
reply
5.4k
views
Comment: C: Filter overlapping reads in pysam
updated 3.7 years ago by 40k • written 9.3 years ago by ★ 1.1k
0
votes
1
reply
5.4k
views
Comment: C: Filter overlapping reads in pysam
updated 3.7 years ago by 40k • written 9.3 years ago by ★ 1.1k
0
votes
2
replies
8.0k
views
Comment: C: Merge vcf files from Multiple Samples
updated 3.8 years ago by 40k • written 9.4 years ago by ★ 1.1k
0
votes
0
replies
32k
views
Comment: C: Samtools And Region List
updated 3.8 years ago by 40k • written 9.5 years ago by ★ 1.1k
0
votes
1
reply
2.5k
views
Comment: C: Protein Domains from fusions
updated 3.8 years ago by 40k • written 7.8 years ago by ★ 1.1k
0
votes
1
reply
7.1k
views
Answer: A: Oncofuse: Prediction Of Driver Gene Fusions From Ngs Data
updated 3.8 years ago by 40k • written 7.8 years ago by ★ 1.1k
0
votes
0
replies
2.5k
views
Comment: C: methods of integrating microarray data and RNAseq data
updated 3.8 years ago by 40k • written 7.8 years ago by ★ 1.1k
22
votes
45
replies
11k
views
9 follow
Tool to separate human and mouse rna seq reads
RNA-Seq next-gen-sequencing
updated 8 months ago by 40k • written 8.4 years ago by ★ 1.1k
0
votes
0
replies
2.5k
views
Comment: C: FPKM for Normal vs Tumor
updated 4.2 years ago by 40k • written 8.8 years ago by ★ 1.1k
0
votes
5
replies
2.5k
views
FPKM for Normal vs Tumor
FPKM RNA-Seq cufflinks
updated 19 months ago by 40k • written 8.8 years ago by ★ 1.1k
1
vote
0
replies
5.9k
views
Visualize gene fusions in IGV
RNA-Seq next-gen
4.3 years ago by Ron ★ 1.1k
0
votes
0
replies
11k
views
Comment: C: Tool to separate human and mouse rna seq reads
4.4 years ago by Ron ★ 1.1k
1
vote
0
replies
2.7k
views
Answer: A: Gene expression profile analysis
4.4 years ago by Ron ★ 1.1k
0
votes
0
replies
1.4k
views
Comment: C: Drugs targeting Gene Fusions
4.4 years ago by Ron ★ 1.1k
1
vote
2
replies
1.4k
views
Drugs targeting Gene Fusions
RNA-Seq next-gen
updated 4.5 years ago by 4.1k • written 4.5 years ago by ★ 1.1k
0
votes
0
replies
29k
views
Comment: C: Drug to Target/Gene/Protein Interaction Databases
4.5 years ago by Ron ★ 1.1k
5
votes
10
replies
1.5k
views
How to recreate this dot plot?
R next-gen RNA-Seq
updated 4.5 years ago by 11k • written 4.5 years ago by ★ 1.1k
0
votes
0
replies
1.5k
views
Comment: C: Plots in R for bioinformatics analyses
4.5 years ago by Ron ★ 1.1k
4
votes
0
replies
9.8k
views
Answer: A: Saving individual clusters from heatmaps
4.5 years ago by Ron ★ 1.1k
0
votes
0
replies
2.9k
views
Comment: C: Counting number of base pairs and features in each bed file
4.6 years ago by Ron ★ 1.1k
0
votes
1
reply
2.9k
views
Comment: C: Counting number of base pairs and features in each bed file
4.6 years ago by Ron ★ 1.1k
0
votes
1
reply
2.9k
views
Comment: C: Counting number of base pairs and features in each bed file
4.6 years ago by Ron ★ 1.1k
2
votes
6
replies
2.9k
views
Counting number of base pairs and features in each bed file
RNA-Seq ngs
4.6 years ago by Ron ★ 1.1k
0
votes
1
reply
11k
views
Comment: C: Tool to separate human and mouse rna seq reads
updated 5.0 years ago by 40k • written 8.0 years ago by ★ 1.1k
0
votes
1
reply
11k
views
Comment: C: Tool to separate human and mouse rna seq reads
updated 5.0 years ago by 40k • written 8.0 years ago by ★ 1.1k
0
votes
0
replies
11k
views
Comment: C: Tool to separate human and mouse rna seq reads
updated 5.0 years ago by 40k • written 8.0 years ago by ★ 1.1k
0
votes
0
replies
11k
views
Comment: Comment: Tool to separate human and mouse rna seq reads
updated 12 months ago by 40k • written 8.0 years ago by ★ 1.1k
0
votes
1
reply
11k
views
Comment: Comment: Tool to separate human and mouse rna seq reads
updated 8 months ago by 40k • written 8.0 years ago by ★ 1.1k
0
votes
1
reply
11k
views
Comment: C: Tool to separate human and mouse ran seq reads
updated 5.0 years ago by 40k • written 8.4 years ago by ★ 1.1k
0
votes
1
reply
11k
views
Comment: Comment: Tool to separate human and mouse rna seq reads
updated 8 months ago by 40k • written 8.4 years ago by ★ 1.1k
0
votes
1
reply
1.4k
views
Database of Mutations and the associated drugs
WES ngs
updated 5.1 years ago by 86k • written 5.1 years ago by ★ 1.1k
1
vote
2
replies
2.2k
views
List of known fusions
RNA-Seq fusion ngs next-gen
updated 5.3 years ago by ▴ 420 • written 6.8 years ago by ★ 1.1k
2
votes
5
replies
4.8k
views
Visualize Gene Fusions
RNA-Seq fusion next-gen R
updated 5.3 years ago by ▴ 420 • written 7.0 years ago by ★ 1.1k
6
votes
6
replies
6.8k
views
Interpreting GSEA results
RNA-Seq GSEA next-gen
updated 5.4 years ago by ▴ 20 • written 5.8 years ago by ★ 1.1k
5
votes
6
replies
7.7k
views
Deconvolution methods on RNAseq data
RNA-Seq next-gen sequencing R bioconductor
updated 5.4 years ago by ▴ 110 • written 6.6 years ago by ★ 1.1k
0
votes
1
reply
1.0k
views
Comment: C: Validating driver genes
5.5 years ago by Ron ★ 1.1k
0
votes
0
replies
711
views
Ratio of samples to do differential expression
RNA-Seq next-gen
5.5 years ago by Ron ★ 1.1k
0
votes
0
replies
2.4k
views
Comment: C: Using Cufflinks for Novel Transcripts
5.6 years ago by Ron ★ 1.1k
0
votes
2
replies
2.4k
views
Using Cufflinks for Novel Transcripts
RNA-Seq cufflinks
updated 5.6 years ago by 11k • written 5.6 years ago by ★ 1.1k
0
votes
0
replies
1.8k
views
Comment: C: Does Cufflinks report chimeric transcripts/fusion genes?
5.6 years ago by Ron ★ 1.1k
0
votes
2
replies
1.9k
views
Mutation analysis on RNAseq
RNA-Seq mutation next-gen SNP snpEff
updated 5.8 years ago by ★ 2.5k • written 7.0 years ago by ★ 1.1k
0
votes
0
replies
6.8k
views
Comment: C: Interpreting GSEA results
5.8 years ago by Ron ★ 1.1k
0
votes
0
replies
6.8k
views
Comment: C: Interpreting GSEA results
5.8 years ago by Ron ★ 1.1k
0
votes
0
replies
2.1k
views
Comment: C: RNASeq data RPKM
5.8 years ago by Ron ★ 1.1k
315 results • Page 1 of 7
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