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11 results • Page
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Job:
Full Stack Web Developer - Cambridge, UK
JavaScript
Python
Visualisation
written 8.4 years ago by
Richard Smith
▴ 400
0
votes
0
replies
2.0k
views
Job:
Bioinformatics Research Postdoc
RNA-Seq
genome
updated 23 days ago by
Ram
43k • written 8.2 years ago by
ggrant543
• 0
2
votes
1
reply
647
views
Job:
Exciting 2024 Summer Internship Opportunity in Translational Genetics Arrowhead Pharmaceuticals!
intern
29 days ago by
Shicheng Guo
★ 9.4k
0
votes
0
replies
303
views
Job:
PhD in bioinformatics / computational biology
NGS
Omics
Evolution
Aging
27 days ago by
Arne.Sahm
• 0
0
votes
0
replies
267
views
Job:
Consultant to update a Snakemake workflow with the new Kubernetes executor plugin for Snakemake 8
Kubernetes
DevOps
executor
AWS
Snakemake
updated 18 days ago by
Michael
54k • written 18 days ago by
jonrkarr
▴ 100
0
votes
0
replies
261
views
Job:
Bioinformatics/Data Science postdoc position in Aarhus, Denmark
data-science
genomics
postdoc
updated 29 days ago by
Ram
43k • written 7 weeks ago by
besen
• 0
0
votes
0
replies
217
views
Job:
Bioinformatics PhD position in Aarhus, Denmark
PhD
Genomics
Cancer
updated 23 days ago by
Ram
43k • written 26 days ago by
besen
• 0
0
votes
0
replies
214
views
Job:
Ensembl Outreach Project Leader
ebi
embl
genomics
ensembl
13 days ago by
Ben_Ensembl
★ 2.4k
1
vote
0
replies
213
views
Job:
CTO/founding engineer role at Voyant Bio
engineer
9 days ago by
Assaf
▴ 10
0
votes
0
replies
156
views
Job:
Ensembl Plants Senior Bioinformatician
ebi
embl
genomics
ensembl
13 days ago by
Ben_Ensembl
★ 2.4k
0
votes
0
replies
130
views
Job:
Postdoctoral Position in Bioinformatics - Mainz, Germany
NGS
Genomics
Post-doc
R-loops
updated 2 days ago by
Ram
43k • written 3 days ago by
4r-rtg
• 0
11 results • Page
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Recent Votes
Answer: Segmentation error while using a tool
What is the best way to rank genes for GSEA?
What is the best way to rank genes for GSEA?
Comment: Raw counts using stringtie
Comment: Raw counts using stringtie
Answer: GRCh38.gmap file
Comment: GRCh38.gmap file
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Recent Replies
Comment: The GDC Legacy Archive is retiring soon.
by
Zhenyu Zhang
★ 1.2k
If you are talking about methylation idat files, they were all migrated from legacy to the data portal. If you are talking about other pl…
Comment: How to access TCGA samples that were treated with a specific drug?
by
Zhenyu Zhang
★ 1.2k
These TCGA samples were taken 10 ~ 20 years ago, and there is no way they have been treated by the modern immunotherapy. Are you sure tha…
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★ 7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1)) It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴ 10
Hi Mathew, The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴ 30
Hi, I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴ 30
Hi, You asked three questions so I will attempt to help the best I can **What should be the optimal GC score cutoff** It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴ 40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
• 0
I ran into same issue of "duplicated gene symbol(s)": 1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, : 22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴ 10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Pindel Segmentation Fault Error
by
Ruqaiya
• 0
This the tool still problematic?
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★ 27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
• 0
Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
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