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153 results • Page
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News:
LAST CALL: Hands-On NGS Data Analysis Workshops 2014
NGS
microRNA
workshop
RNA-Seq
updated 14 days ago by
Ram
38k • written 8.7 years ago by
David Langenberger
9.9k
4
votes
0
replies
1.4k
views
News:
$650M gift to Broad seeks to propel (Genomics based ) psychiatric research
sequencing
updated 14 days ago by
Ram
38k • written 8.7 years ago by
William
★ 5.2k
0
votes
0
replies
2.1k
views
News:
Second Annual International Environmental Omics conference to be held in Liverpool, UK. September 15th-18th
Conference
updated 14 days ago by
Ram
38k • written 8.7 years ago by
Daniel
★ 3.9k
2
votes
0
replies
4.7k
views
News:
LAST CALL: Two days left to register for our workshop 'RNA-seq Bioinformatics: A Practical Introduction'
RNA-Seq
workshop
updated 14 days ago by
Ram
38k • written 8.7 years ago by
David Langenberger
9.9k
12
votes
8
replies
6.4k
views
News:
rRNA Depletion / Poly-A Selection Responsible for RNA-seq Bias
rRNA-depletion
RNA-seq-bias
updated 14 days ago by
Ram
38k • written 8.7 years ago by
support
▴ 640
0
votes
9
replies
1.9k
views
News:
Practical Genomics: From Biology to Biostatistics Workshop (Baltimore, MD)
workshop
updated 14 days ago by
Ram
38k • written 8.7 years ago by
Matt Shirley
10k
6
votes
9
replies
3.6k
views
News:
1000 Genomes : The Initial Phase 3 variant list and phased genotypes.
1000genomes
updated 14 days ago by
Ram
38k • written 8.7 years ago by
Pierre Lindenbaum
153k
2
votes
0
replies
1.5k
views
News:
Acute Myeloid Leukemia Outcome Prediction Challenge
prediction
cancer
updated 14 days ago by
Ram
38k • written 8.8 years ago by
Mary
11k
3
votes
0
replies
1.4k
views
News:
Bioconductor Conference, July 31 - Aug 1, 2014, Boston
bioconductor
updated 14 days ago by
Ram
38k • written 8.8 years ago by
Sean Davis
26k
6
votes
1
reply
2.3k
views
News:
FastQC Version 0.11.1 released
genome
next-gen-sequencing
updated 14 days ago by
Ram
38k • written 8.8 years ago by
rtliu
★ 2.2k
1
vote
0
replies
1.2k
views
News:
Day 1 Highlights of SFAF 2014 Meeting
Sequencing
updated 14 days ago by
Ram
38k • written 8.8 years ago by
support
▴ 640
0
votes
0
replies
4.6k
views
News:
Bioinformatics Training Courses - Metagenomics and NGS data analysis - Sydney and Canberra, Australia
metagenomics
training
next-gen-sequencing
updated 14 days ago by
Ram
38k • written 8.8 years ago by
Neilfws
49k
1
vote
0
replies
4.0k
views
News:
Hands-On Training in RNA-seq Bioinformatics: A Practical Introduction - Mapping, Visualization, Basic Analyses
next-gen
RNA-Seq
workshop
updated 14 days ago by
Ram
38k • written 8.8 years ago by
David Langenberger
9.9k
3
votes
0
replies
2.5k
views
News:
SeqAhead - COST - Bioinformatics for Non-Coding RNAs: State-of-the-art Training Workshop: 30/6-3/7/2014, Athens, Greece
RNA-Seq
workshop
lncRNA
microRNA
updated 14 days ago by
Ram
38k • written 8.8 years ago by
IV
★ 1.3k
2
votes
0
replies
2.3k
views
News:
Connecting NGS Researcher Directly to Data Analysis Provider: New Genohub Service Launched
NGS-data-analysis
bioinformatics-services
updated 14 days ago by
Ram
38k • written 8.8 years ago by
support
▴ 640
1
vote
0
replies
930
views
News:
National Advisory Council for Human Genome Research, 71st meeting--live Monday morning
nhgri
updated 14 days ago by
Ram
38k • written 8.8 years ago by
Mary
11k
23
votes
7
replies
4.0k
views
News:
Research accounts on GitHub
github
git
updated 14 days ago by
Ram
38k • written 8.9 years ago by
Pierre Lindenbaum
153k
4
votes
4
replies
1.4k
views
News:
VCFclin working group
vcfclin
updated 14 days ago by
Ram
38k • written 8.9 years ago by
keilbeck
▴ 30
6
votes
1
reply
2.6k
views
News:
GMOD Online Training 2014 coming up
galaxy
chado
gmod
annotation
updated 14 days ago by
Ram
38k • written 8.9 years ago by
Mary
11k
6
votes
7
replies
4.8k
views
News:
Illumina Nextseq 500 And Hiseq X Ten: Newer Tech Lowering Cost Per Mbp
Illumina
updated 18 days ago by
Ram
38k • written 9.2 years ago by
support
▴ 640
6
votes
1
reply
3.4k
views
News:
Symposium And Rna-Seq Data Analysis Workshop Charlotte May 13-14
RNA
RNA-seq
training
updated 14 days ago by
Ram
38k • written 9.0 years ago by
Ann
★ 2.3k
2
votes
0
replies
2.1k
views
News:
The 2nd Plant Genomics Congress London 12 & 13 May 2014
ngs
plant-genomics
plant-science
updated 14 days ago by
Ram
38k • written 8.9 years ago by
nnoakes
▴ 20
0
votes
0
replies
3.5k
views
News:
Journal Of Bioinformatics Research Studies- Call For Papers
publication
biology
updated 14 days ago by
Ram
38k • written 9.0 years ago by
jbrs.editor
• 0
3
votes
0
replies
4.2k
views
News:
Free Online Harvardx Course, Data Analysis For Genomics, Starts April 7
methylation
bioconductor
ChIP-seq
RNA-seq
R
updated 14 days ago by
Ram
38k • written 9.0 years ago by
rtliu
★ 2.2k
24
votes
7
replies
4.0k
views
News:
#Bioinformatics Crowdcoding
crowd-coding
updated 21 days ago by
Ram
38k • written 9.7 years ago by
Pierre Lindenbaum
153k
17
votes
6
replies
8.4k
views
News:
Final registration deadline: September 15th - Bioinformatics Hands-On NGS Data Analysis Workshops 2014
methylation
RNA-seq
updated 14 days ago by
Ram
38k • written 9.0 years ago by
David Langenberger
9.9k
5
votes
1
reply
3.3k
views
News:
Broad Gatk Haplotypecaller Speed Improved 2-4 X By Cooperation With Intel, And Incremental Multi-Sample Calling Made Possible!
gatk
variant-calling
updated 14 days ago by
Ram
38k • written 9.0 years ago by
William
★ 5.2k
0
votes
0
replies
2.1k
views
News:
Conference Announcement - Camda 2014
conference
updated 17 days ago by
Ram
38k • written 9.0 years ago by
okko.clevert
▴ 240
32
votes
6
replies
12k
views
7 follow
News:
Ncbi Releases Entrez Direct, The Entrez Utilities On The Unix Command Line
ncbi
genbank
pubmed
command-line
entrez
updated 18 days ago by
Ram
38k • written 9.1 years ago by
Pierre Lindenbaum
153k
5
votes
1
reply
1.6k
views
News:
Google Joins The Global Alliance For Genomics And Health
genomics
updated 17 days ago by
Ram
38k • written 9.1 years ago by
Pierre Lindenbaum
153k
3
votes
0
replies
3.0k
views
News:
Tumorportal - A Tool For Exploring A Pan-Cancer Dataset
tcga
cancer-genomics
updated 17 days ago by
Ram
38k • written 9.1 years ago by
Malachi Griffith
19k
7
votes
1
reply
2.9k
views
News:
A Multi-Split Mapping Algorithm For Circular Rna, Splicing, Trans-Splicing, And Fusion Detection
ngs
mapping
updated 18 days ago by
Ram
38k • written 9.1 years ago by
David Langenberger
9.9k
4
votes
0
replies
2.1k
views
News:
Rna-Seq Workshop In Oslo - Seats Available
RNA-seq
updated 18 days ago by
Ram
38k • written 9.1 years ago by
jan.christian
▴ 60
2
votes
1
reply
1.6k
views
News:
Us Researchers: Help Influence Stem Education With New Nsf Strategies (Deadline Next Tuesday)
education
genomics
updated 18 days ago by
Ram
38k • written 9.1 years ago by
Mary
11k
10
votes
1
reply
2.9k
views
News:
Ucsc: Dna Sequences In Web Pages Indexed By Bing.Com / Microsoft Research (All Phenotype And Literature Tracks)
web
ucsc
updated 18 days ago by
Ram
38k • written 9.2 years ago by
Pierre Lindenbaum
153k
15
votes
3
replies
6.4k
views
News:
Top Bioinformatics Contributions Of 2013
bioinformatics
updated 19 days ago by
Ram
38k • written 9.3 years ago by
ugly.betty77
★ 1.1k
6
votes
0
replies
5.0k
views
News:
Game Changer? Illumina Nextseq 500
illumina
updated 18 days ago by
Ram
38k • written 9.2 years ago by
IV
★ 1.3k
2
votes
0
replies
1.8k
views
News:
Next Generation Intelligence - Free Bioinformatics Analysis
ChIP-seq
RNA-seq
next-gen-sequencing
updated 18 days ago by
Ram
38k • written 9.2 years ago by
nextgenintelligence
▴ 20
2
votes
0
replies
3.0k
views
News:
Short Course And Workshop On Rna-Seq Analysis
RNA-seq
updated 18 days ago by
Ram
38k • written 9.2 years ago by
jan.christian
▴ 60
3
votes
1
reply
2.4k
views
News:
The 2014 Nucleic Acids Research Database Issue
database
updated 19 days ago by
Ram
38k • written 9.2 years ago by
Pierre Lindenbaum
153k
6
votes
1
reply
1.8k
views
News:
Massively Differential Bias Between Two Widely Used Illumina Library Preparation Methods For Small Rna Sequencing
illumina
RNA-seq
updated 19 days ago by
Ram
38k • written 9.2 years ago by
David Langenberger
9.9k
9
votes
3
replies
3.0k
views
News:
New Human Genome Assembly (Grch38) Released
human-genome
assembly
updated 19 days ago by
Ram
38k • written 9.2 years ago by
Pierre Lindenbaum
153k
5
votes
1
reply
2.7k
views
News:
Canadian Bioinformatics Workshops Series Announced For 2014
training
updated 19 days ago by
Ram
38k • written 9.3 years ago by
Obi Griffith
20k
0
votes
0
replies
1.7k
views
News:
Workshop: Programming For Evolutionary Biology (March 21St – April 6Th 2014)
ngs
updated 19 days ago by
Ram
38k • written 9.3 years ago by
David Langenberger
9.9k
7
votes
3
replies
4.2k
views
News:
Pathway Commons 2 - Search And Visualize Public Biological Pathway Information. Single Point Of Access.
api
cytoscape
updated 19 days ago by
Ram
38k • written 9.3 years ago by
B. Arman Aksoy
★ 1.2k
3
votes
1
reply
1.4k
views
News:
Frederick Sanger ( 1918 - 2013 )
sanger-institute
updated 19 days ago by
Ram
38k • written 9.3 years ago by
Pierre Lindenbaum
153k
2
votes
1
reply
1.9k
views
News:
Igb 8 Webinar Starts At 1 Pm Eastern
visualization
genome-browser
bam
rna-seq
updated 20 days ago by
Ram
38k • written 9.4 years ago by
Ann
★ 2.3k
5
votes
2
replies
3.4k
views
News:
Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser
RNA-seq
ChIP-seq
updated 20 days ago by
Ram
38k • written 9.4 years ago by
Ann
★ 2.3k
25
votes
7
replies
5.8k
views
News:
Pubmed Commons : A System That Enables Researchers To Share Their Opinions About Scientific Publications
ncbi
pubmed
updated 19 days ago by
Ram
38k • written 9.4 years ago by
Pierre Lindenbaum
153k
7
votes
4
replies
2.4k
views
News:
Boston Ma Us Area Folks: Software Carpentry Workshop For Women In Science Coming Up
python
training
updated 25 days ago by
Ram
38k • written 9.9 years ago by
Mary
11k
153 results • Page
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Recent Votes
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Is There A Way To Run Fastqc On All The Fastq Files In The Different Directories With Just One Command?
Comment: samtools idxstats not removing ChrM
The Biostar Handbook. A bioinformatics e-book for beginners.
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
Converting mapped + unmapped BAM files to raw FASTQ (RNA-seq data)
Comment: GATK GenotypeGVCFs explain
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Comment: GATK GenotypeGVCFs explain
by
Pierre Lindenbaum
153k
https://gatk.broadinstitute.org/hc/en-us/articles/360035531852-Intervals-and-interval-lists
Comment: GATK GenotypeGVCFs explain
by
Sarah
▴ 30
thank you
Comment: GATK GenotypeGVCFs explain
by
raphael.B
▴ 270
It limits the operation to some genomic regions given as parameter
Comment: GATK GenotypeGVCFs explain
by
Sarah
▴ 30
what does the option L
Comment: GATK GenotypeGVCFs explain
by
Pierre Lindenbaum
153k
GenotypeGVCFs takes a set of GVCF files called with HaplotyperCaler and output a VCF file.
Answer: TCGA Methylation Data and Gene Mapping
by
Basti
★ 1.4k
CpGs may be annotated to more than >1 gene simply because gene regions overlap on the genome. If you want to associate each gene to a me…
Comment: Circos plot
by
Fabio Marroni
★ 3.0k
Please give a look to [this post][1] for increasing the probability to get an answer. If I may add some needed info: 1. What exactly do y…
Comment: Trying to install Roary with Conda results in error message
by
tobiwan
▴ 10
Wow, thank you so much for your explanation! My conda channel is indeed set to strict priority. Should packages with different dependencie…
Comment: FeatureCounts >edgeR > GO
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Basti
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You can use BioMart to convert your "gene-IDs" to gene symbols, but you need to specify from which database your gene identifiers come from
Comment: How to create GO Bar Plot using data obtained from DAVID Functional Enrichment A
by
Basti
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If you search "DAVID dotplot" on this forum, you have many answers to your question. Note that you can also perform DAVID Functional Enrich…
Answer: How to implement this two-stage one-to-many workflow using WDL?
by
Pierre Lindenbaum
153k
nottested, something like: ``` version 1.0 workflow BIOSTAR { call FIRST { } scatter (F in FIRST.each_F)…
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by
AtenaLia
▴ 20
You can try https://genebe.net , it is similar to Varsome though...
Answer: ACMG assignment tools
by
AtenaLia
▴ 20
Hi, free ACMG implementation without restrictions can be found at https://genebe.net . AFAIK there is also a free API coming.
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Gene_MMP8
▴ 220
I don't have the data available. I want to identify such datasets. The overall aim is to determine what factors influence fastq data qualit…
Comment: mrbayes segmentation fault
by
Mensur Dlakic
★ 23k
I don't know what exactly the error message means. What I can tell you is that a burn-in of 2500 generations is absolutely inadequate. That…
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