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Comment: Comment: How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
3.7 years ago by rohitsatyam102 ▴ 940
5
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5
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4.2k
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How to select nFeature parameter of SelectIntegrationFeatures function in Seurat
scrnaseq Seurat
updated 15 months ago by • 0 • written 3.7 years ago by ▴ 940
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3.2k
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Comment: Comment: Mitochondrial percentage in Seurat
3.7 years ago by rohitsatyam102 ▴ 940
3
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1
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1.6k
views
Forum: How to download multiple .gz files from Ensembl Protists database
wget protist ensembl
updated 20 months ago by ★ 2.1k • written 3.7 years ago by ▴ 940
0
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0
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806
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How to update gff/gtf files after using Mauve Config Mover
assembly genome Mauve
3.7 years ago by rohitsatyam102 ▴ 940
0
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0
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11k
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Comment: Comment: Mauve Contig Mover
4.1 years ago by rohitsatyam102 ▴ 940
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1
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1.9k
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Comment: Comment: Quick questions about Alevin and AlevinQC
4.1 years ago by rohitsatyam102 ▴ 940
2
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3
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1.9k
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Quick questions about Alevin and AlevinQC
alevinqc alevin
updated 4.1 years ago by 89k • written 4.1 years ago by ▴ 940
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0
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5.5k
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Comment: Comment: Is the ENSEMBL FTP down?
4.2 years ago by rohitsatyam102 ▴ 940
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0
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5.5k
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Comment: Comment: Is the ENSEMBL FTP down?
4.2 years ago by rohitsatyam102 ▴ 940
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2
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5.5k
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Comment: Comment: Is the ENSEMBL FTP down?
4.2 years ago by rohitsatyam102 ▴ 940
0
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0
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26k
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Answer: Answer: htseq-counts output merge into one matrix ??
4.2 years ago by rohitsatyam102 ▴ 940
2
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2
replies
1.3k
views
How to use RINalyzer plugin in cytoscape
cytoscape RINalyzer networks
updated 4.3 years ago by ▴ 310 • written 4.3 years ago by ▴ 940
0
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0
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2.1k
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Comment: Comment: Prediction error with libsvm
4.3 years ago by rohitsatyam102 ▴ 940
0
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1
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19k
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Comment: Comment: Confusion about FindMarkers(), FindVariableFeatures(), RunTSNE(), and RunUMAP()
4.5 years ago by rohitsatyam102 ▴ 940
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0
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2.2k
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Comment: Comment: Parsing Dates from Multiple Websites
4.5 years ago by rohitsatyam102 ▴ 940
57
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15
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135k
views
11 follow
Tutorial: Using R in Conda
R
updated 15 months ago by ▴ 50 • written 5.3 years ago by ▴ 940
0
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1
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2.2k
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Comment: Comment: Parsing Dates from Multiple Websites
4.5 years ago by rohitsatyam102 ▴ 940
0
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0
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2.2k
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Comment: Comment: Parsing Dates from Multiple Websites
4.5 years ago by rohitsatyam102 ▴ 940
0
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0
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135k
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Comment: Comment: Using R in Conda
4.5 years ago by rohitsatyam102 ▴ 940
7
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3
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135k
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Answer: Answer: Using R in Conda
updated 4.5 years ago by 45k • written 4.5 years ago by ▴ 940
2
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8
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2.2k
views
Parsing Dates from Multiple Websites
R
updated 4.5 years ago by 21k • written 4.5 years ago by ▴ 940
0
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1
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2.4k
views
Which VCF's to use for BQSR in GATK
GATK BQSR next-gen-sequencing
updated 2.6 years ago by 45k • written 5.7 years ago by ▴ 940
0
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0
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9.7k
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Comment: C: Retrieve mutation position and ID for a mutation in hgvs format
4.8 years ago by rohitsatyam102 ▴ 940
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0
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2.5k
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Comment: C: What does minoverlap = 1L means?
4.9 years ago by rohitsatyam102 ▴ 940
9
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1
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9.4k
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Forum: What are chromatin states ?
genome ChIP-Seq
21 months ago by rohitsatyam102 ▴ 940
0
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0
replies
871
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MNAse-Seq Dataset for Different Cancer Types
Cancer bigwig Mnaseseq
updated 2.6 years ago by 45k • written 4.9 years ago by ▴ 940
0
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0
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3.3k
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Comment: C: Crucial difference between dexseq and HTSeq-count
5.0 years ago by rohitsatyam102 ▴ 940
0
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1
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2.2k
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Comment: C: DRIMSeq with more than 2 categories in the group
5.1 years ago by rohitsatyam102 ▴ 940
0
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0
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826
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RNAseq of rice is super weird
rna-seq RNA-Seq sequence genome
5.1 years ago by rohitsatyam102 ▴ 940
2
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1
reply
4.0k
views
What packages/tools are available to use SJ.out.tab file obtained from STAR
RNA-Seq R next-gen sequence rna-seq
updated 5.1 years ago by ▴ 10 • written 5.1 years ago by ▴ 940
0
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0
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9.0k
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Comment: C: AGAT - Another Gff Analysis Toolkit
5.1 years ago by rohitsatyam102 ▴ 940
0
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1
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9.0k
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Comment: C: AGAT - Another Gff Analysis Toolkit
5.1 years ago by rohitsatyam102 ▴ 940
1
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1
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4.0k
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Comment: C: GO annotation for rice in an R package
5.1 years ago by rohitsatyam102 ▴ 940
0
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0
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7.3k
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Comment: C: EnhancedVolcano questions on parameters, arguments can set
5.1 years ago by rohitsatyam102 ▴ 940
0
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2
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20k
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Comment: Comment: DESeq2 compare all levels
updated 21 months ago by 45k • written 5.1 years ago by ▴ 940
1
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2
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40k
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Comment: C: Sjdboverhang Option In Star
5.1 years ago by rohitsatyam102 ▴ 940
0
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1
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2.3k
views
Comment: C: Does it matters whether we give FASTA or FASTq files to STAR
5.1 years ago by rohitsatyam102 ▴ 940
3
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3
replies
2.3k
views
Does it matters whether we give FASTA or FASTq files to STAR
RNA-Seq rna-seq alignment
updated 5.1 years ago by 15k • written 5.1 years ago by ▴ 940
0
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0
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130k
views
Comment: C: How To Split A Bam File By Chromosome
5.1 years ago by rohitsatyam102 ▴ 940
0
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1
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1.5k
views
Comment: C: Will it be fine if the benchmarking of an assembler/aligner is performed using a
5.1 years ago by rohitsatyam102 ▴ 940
0
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1
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1.5k
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Comment: C: Will it be fine if the benchmarking of an assembler/aligner is performed using a
5.1 years ago by rohitsatyam102 ▴ 940
5
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6
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1.5k
views
Will it be fine if the benchmarking of an assembler/aligner is performed using a single chromosome of Human
assembly sequence alignment genome next-gen
updated 5.1 years ago by 13k • written 5.1 years ago by ▴ 940
0
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1
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2.1k
views
Comment: C: What tools/ commands must be used for time and memory usage estimation of an ali
5.1 years ago by rohitsatyam102 ▴ 940
4
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4
replies
2.1k
views
What tools/ commands must be used for time and memory usage estimation of an aligner
alignment assembly next-gen
updated 5.1 years ago by ★ 1.8k • written 5.2 years ago by ▴ 940
0
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1
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3.4k
views
Comment: A: Over 15 fully funded PhD studentships in Quantitative Biology in Lausanne, Switz
5.2 years ago by rohitsatyam102 ▴ 940
0
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0
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2.0k
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Comment: C: Processing GFF file for feature extraction
5.2 years ago by rohitsatyam102 ▴ 940
1
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2
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2.0k
views
Processing GFF file for feature extraction
assembly sequence Assembly gene
5.2 years ago by rohitsatyam102 ▴ 940
0
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2
replies
7.9k
views
Comment: C: GATK quality recalibration to get recalibrated BAM files before SNP calling
updated 5.2 years ago by 45k • written 6.2 years ago by ▴ 940
0
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0
replies
877
views
EULER-SR throws error NULL was not declared in this scope
assembly
updated 5.2 years ago by 35k • written 5.2 years ago by ▴ 940
238 results • Page 3 of 5
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