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Comment: Comment: compare ChIP-seq datasets in two cell lines
3.7 years ago by Bogdan ★ 1.4k
0
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1
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1.4k
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Comment: Comment: compare ChIP-seq datasets in two cell lines
3.7 years ago by Bogdan ★ 1.4k
1
vote
4
replies
1.4k
views
compare ChIP-seq datasets in two cell lines
ChIP-seq
3.7 years ago by Bogdan ★ 1.4k
21
votes
10
replies
14k
views
7 follow
workflow management system : WDL, CWL, Ruffus, SnakeMake, etc
pipeline language
updated 3.5 years ago by 15k • written 7.0 years ago by ★ 1.4k
0
votes
1
reply
960
views
4C packages
4C
updated 3.8 years ago by 4.8k • written 3.8 years ago by ★ 1.4k
5
votes
4
replies
2.7k
views
6 follow
bioinformatics pipelines on GCP or AWS
RNA-seq google ChIP-seq cloud
updated 3.6 years ago by 4.8k • written 4.1 years ago by ★ 1.4k
1
vote
1
reply
1.4k
views
shiny apps for DEseq2, edgeR, limma
shiny limma DEseq2 edgeR
updated 3.8 years ago by ▴ 30 • written 3.8 years ago by ★ 1.4k
2
votes
1
reply
4.2k
views
heatmap of genes pseudotime in monocle3
monocle2 monocle3 and
20 months ago by Bogdan ★ 1.4k
2
votes
0
replies
4.2k
views
Answer: Answer: heatmap of genes pseudotime in monoclle3
3.9 years ago by Bogdan ★ 1.4k
0
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0
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1.7k
views
Comment: Comment: monocle3 and spData
4.0 years ago by Bogdan ★ 1.4k
0
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2
replies
1.7k
views
monocle3 and spData
monocle3
4.0 years ago by Bogdan ★ 1.4k
0
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0
replies
1.1k
views
convert monocle3 into monocle2 cds
monocle
4.0 years ago by Bogdan ★ 1.4k
1
vote
1
reply
817
views
scanning sequences or promoter sequences with specific motifs
motifs
updated 4.1 years ago by 21k • written 4.1 years ago by ★ 1.4k
0
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0
replies
1.7k
views
Comment: Comment: batch correction in ChIp-seq data
4.2 years ago by Bogdan ★ 1.4k
0
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1
reply
1.7k
views
Comment: Comment: batch correction in ChIp-seq data
4.2 years ago by Bogdan ★ 1.4k
0
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4
replies
1.7k
views
batch correction in ChIp-seq data
batch ChIP-seq
updated 4.2 years ago by 13k • written 4.2 years ago by ★ 1.4k
1
vote
3
replies
1.5k
views
extracting a gene from a gmt file
gmt pathway
updated 2.9 years ago by 45k • written 4.2 years ago by ★ 1.4k
0
votes
1
reply
1.1k
views
downloading fastq files from galaxy
galaxy
updated 4.3 years ago by 15k • written 4.3 years ago by ★ 1.4k
0
votes
0
replies
812
views
about the batch correction and integration and normalization of scRNA-seq data
normalization scRNA-seq
4.5 years ago by Bogdan ★ 1.4k
6
votes
3
replies
1.6k
views
recent Hi-C databases
hi-C 4C 3C
updated 4.5 years ago by ▴ 380 • written 4.8 years ago by ★ 1.4k
3
votes
1
reply
999
views
HI-C analysis in the cloud environment
HI-C
updated 4.6 years ago by ▴ 380 • written 4.7 years ago by ★ 1.4k
0
votes
1
reply
909
views
Forum: Apache Spark on AWS
apachespark
updated 4.6 years ago by 23k • written 4.6 years ago by ★ 1.4k
0
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0
replies
1.8k
views
Comment: C: to annotate BEDPE files
4.6 years ago by Bogdan ★ 1.4k
0
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3
replies
1.8k
views
to annotate BEDPE files
bedtools annotate
updated 2.1 years ago by ▴ 760 • written 4.6 years ago by ★ 1.4k
0
votes
0
replies
767
views
Comment: C: a simple question about file permissions
4.6 years ago by Bogdan ★ 1.4k
0
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2
replies
767
views
a simple question about file permissions
SLURM cluster operating system
4.6 years ago by Bogdan ★ 1.4k
0
votes
1
reply
1.3k
views
CUT&TAG and CUT&RUN
ChIP-Seq
updated 4.7 years ago by 22k • written 4.7 years ago by ★ 1.4k
1
vote
5
replies
2.8k
views
scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
scRNA-seq
updated 4.8 years ago by ▴ 40 • written 5.0 years ago by ★ 1.4k
0
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0
replies
2.8k
views
Comment: C: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
4.8 years ago by Bogdan ★ 1.4k
0
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0
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1.6k
views
Comment: C: recent Hi-C databases
4.8 years ago by Bogdan ★ 1.4k
0
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0
replies
1.6k
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
4.9 years ago by Bogdan ★ 1.4k
0
votes
1
reply
1.6k
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
4.9 years ago by Bogdan ★ 1.4k
0
votes
1
reply
1.6k
views
Comment: C: visualize RNA secondary/tertiary structure, and overlay the primary sequence
4.9 years ago by Bogdan ★ 1.4k
0
votes
6
replies
1.6k
views
visualize RNA secondary/tertiary structure, and overlay the primary sequence
RNA RNA structure visualization
4.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
6.1k
views
Comment: C: filtering the somatic variants
4.9 years ago by Bogdan ★ 1.4k
5
votes
11
replies
6.1k
views
filtering the somatic variants
SNP snp
updated 4.9 years ago by • 0 • written 9.6 years ago by ★ 1.4k
1
vote
0
replies
3.3k
views
Answer: A: NMF tools for scRNA analysis
4.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
747
views
database of human mRNA structures
RNA
4.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
790
views
predicted structure of full-length mRNA/lincRNA
sequence structure RNA
5.0 years ago by Bogdan ★ 1.4k
0
votes
0
replies
2.8k
views
Comment: C: scRNA-seq, MONOCLE3, and trajectory reconstruction, and Moran I statistics
5.0 years ago by Bogdan ★ 1.4k
1
vote
1
reply
1.6k
views
Answer: A: Network analysis: where to start?
5.0 years ago by Bogdan ★ 1.4k
1
vote
5
replies
1.1k
views
GO and C++
C++ GO
updated 5.1 years ago by 9.3k • written 5.1 years ago by ★ 1.4k
0
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0
replies
1.1k
views
Comment: C: GO and C++
5.1 years ago by Bogdan ★ 1.4k
0
votes
3
replies
2.5k
views
scRNA-seq data at different time points
scRNA-seq
updated 4.5 years ago by • 0 • written 5.3 years ago by ★ 1.4k
0
votes
4
replies
3.9k
views
packages for displaying heatmaps of mutations etc ...
SNP
updated 5.3 years ago by ▴ 10 • written 9.1 years ago by ★ 1.4k
0
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0
replies
2.5k
views
Comment: C: scRNA-seq data at different time points
5.3 years ago by Bogdan ★ 1.4k
0
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0
replies
5.2k
views
Comment: C: computing resources for scRNA-seq analysis
5.3 years ago by Bogdan ★ 1.4k
0
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1
reply
5.2k
views
Comment: C: computing resources for scRNA-seq analysis
5.4 years ago by Bogdan ★ 1.4k
0
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0
replies
5.2k
views
Comment: C: computing resources for scRNA-seq analysis
5.4 years ago by Bogdan ★ 1.4k
0
votes
0
replies
5.2k
views
Comment: C: computing resources for scRNA-seq analysis
5.4 years ago by Bogdan ★ 1.4k
388 results • Page 2 of 8
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