User: k.nirmalraman

3

votes

5

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13k

views

visualization

updated 7.0 years ago by Biostar 20 • written 11.4 years ago by k.nirmalraman ★ 1.1k

7

votes

6

replies

17k

views

6 follow

bowtie tophat cufflinks

updated 7.6 years ago by mrmkanni93 • 0 • written 11.5 years ago by k.nirmalraman ★ 1.1k

25

votes

13

replies

20k

views

6 follow

gene annotation bed

updated 8.2 years ago by Shicheng Guo ★ 9.5k • written 11.9 years ago by k.nirmalraman ★ 1.1k

2

votes

4

replies

6.5k

views

barcode split

updated 8.9 years ago by pingEde ▴ 40 • written 11.0 years ago by k.nirmalraman ★ 1.1k

6

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10

replies

6.8k

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sequencing mapping

updated 21 months ago by Ram 44k • written 11.1 years ago by k.nirmalraman ★ 1.1k

3

votes

4

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5.8k

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rnaseq pipeline deseq bowtie visualization igv

updated 9.5 years ago by Biostar 20 • written 11.4 years ago by k.nirmalraman ★ 1.1k

1

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2

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2.8k

views

cuffdiff

updated 9.7 years ago by Biostar 20 • written 10.8 years ago by k.nirmalraman ★ 1.1k

1

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4

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9.5k

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enrichment r

updated 9.8 years ago by smacneil88 • 0 • written 11.5 years ago by k.nirmalraman ★ 1.1k

12

votes

7

replies

13k

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bedtools annotation

updated 9.9 years ago by Biostar 20 • written 11.9 years ago by k.nirmalraman ★ 1.1k

28

votes

11

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21k

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6 follow

visualization visualization r

updated 2.7 years ago by Ram 44k • written 11.4 years ago by k.nirmalraman ★ 1.1k

3

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1

reply

3.3k

views

updated 10.4 years ago by Biostar 20 • written 10.5 years ago by k.nirmalraman ★ 1.1k

7

votes

4

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7.4k

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rna-seq normalization

updated 10.6 years ago by Charles Warden 8.3k • written 10.7 years ago by k.nirmalraman ★ 1.1k

4

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2

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4.6k

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chromosome

updated 10.6 years ago by Devon Ryan 104k • written 10.6 years ago by k.nirmalraman ★ 1.1k

0

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0

replies

2.3k

views

enrichment

updated 10.6 years ago by Biostar 20 • written 11.4 years ago by k.nirmalraman ★ 1.1k

7

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3

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5.2k

views

10.6 years ago by k.nirmalraman ★ 1.1k

5

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5

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6.5k

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meme motif

updated 10.7 years ago by Biostar 20 • written 11.9 years ago by k.nirmalraman ★ 1.1k

3

votes

4

replies

11k

views

updated 10.8 years ago by Sean Davis 27k • written 10.8 years ago by k.nirmalraman ★ 1.1k

2

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7

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6.6k

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htseq tophat rnaseq

10.9 years ago by k.nirmalraman ★ 1.1k

3

votes

2

replies

24k

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heatmap r

updated 10.9 years ago by Chris Cabanski ▴ 330 • written 10.9 years ago by k.nirmalraman ★ 1.1k

1

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7

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5.7k

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normalization comparison statistics

10.9 years ago by k.nirmalraman ★ 1.1k

18

votes

7

replies

17k

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rna-seq normalization

updated 11.0 years ago by Mikael Huss 4.8k • written 11.5 years ago by k.nirmalraman ★ 1.1k

8

votes

8

replies

7.6k

views

tophat alignment rnaseq bowtie pipeline

updated 11.0 years ago by Devon Ryan 104k • written 11.0 years ago by k.nirmalraman ★ 1.1k

13

votes

6

replies

8.1k

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fasta length

updated 11.1 years ago by brentp 24k • written 11.1 years ago by k.nirmalraman ★ 1.1k

11

votes

6

replies

12k

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differential-expression rnaseq differential-expression

updated 11.3 years ago by Charles Warden 8.3k • written 11.3 years ago by k.nirmalraman ★ 1.1k

4

votes

2

replies

5.9k

views

go visualization

updated 11.3 years ago by Woa ★ 2.9k • written 11.3 years ago by k.nirmalraman ★ 1.1k

4

votes

1

reply

12k

views

heatmap clustering

updated 11.3 years ago by Neilfws 49k • written 11.3 years ago by k.nirmalraman ★ 1.1k

4

votes

8

replies

5.5k

views

heatmap

updated 11.4 years ago by Alex Reynolds 35k • written 11.4 years ago by k.nirmalraman ★ 1.1k

2

votes

9

replies

5.9k

views

bowtie visualization

updated 11.4 years ago by Alex Reynolds 35k • written 11.4 years ago by k.nirmalraman ★ 1.1k

1

vote

3

replies

14k

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limma differential-expression rnaseq differential-expression differential

updated 11.4 years ago by Steve Lianoglou 5.2k • written 11.4 years ago by k.nirmalraman ★ 1.1k

2

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3

replies

2.9k

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classification

11.4 years ago by k.nirmalraman ★ 1.1k

8

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1

reply

4.2k

views

gene rna rna-seq

11.4 years ago by k.nirmalraman ★ 1.1k

2

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4

replies

4.5k

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r correlation plot

updated 11.5 years ago by Alex Reynolds 35k • written 11.5 years ago by k.nirmalraman ★ 1.1k

1

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2

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5.6k

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differential-expression differential-expression rna rna-seq illumina

updated 11.5 years ago by Johanna Schott ▴ 400 • written 11.5 years ago by k.nirmalraman ★ 1.1k

0

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1

reply

2.5k

views

rna-seq rna quality qualitycontrol

updated 11.5 years ago by epistatic ▴ 190 • written 11.5 years ago by k.nirmalraman ★ 1.1k

7

votes

8

replies

5.7k

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rna rna-seq deseq bioconductor

updated 11.5 years ago by Jeremy Leipzig 22k • written 11.5 years ago by k.nirmalraman ★ 1.1k

10

votes

7

replies

3.7k

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bed

updated 11.7 years ago by sjneph ▴ 690 • written 11.7 years ago by k.nirmalraman ★ 1.1k

7

votes

5

replies

7.2k

views

meme motif

updated 11.9 years ago by Mikael Huss 4.8k • written 11.9 years ago by k.nirmalraman ★ 1.1k

1

vote

9

replies

3.6k

views

meme motif

updated 11.9 years ago by Ian 6.1k • written 11.9 years ago by k.nirmalraman ★ 1.1k

0

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1

reply

3.3k

views

updated 11.9 years ago by thiesgehrmann ▴ 40 • written 11.9 years ago by k.nirmalraman ★ 1.1k

8

votes

3

replies

6.4k

views

bedtools bash awk

updated 11.9 years ago by Dave Richardson ▴ 370 • written 11.9 years ago by k.nirmalraman ★ 1.1k

5

votes

1

reply

3.1k

views

visualization ucsc genome browser read counts r

updated 11.9 years ago by Fidel ★ 2.0k • written 11.9 years ago by k.nirmalraman ★ 1.1k

15

votes

6

replies

9.5k

views

rna seq read

updated 11.9 years ago by Sandeep ▴ 260 • written 11.9 years ago by k.nirmalraman ★ 1.1k