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BUSCO, Gene duplication
Gene duplication BUSCO
updated 16 months ago by ★ 2.4k • written 16 months ago by ▴ 30
0
votes
0
replies
380
views
Match or partial Match TEs, REPET, TEs annotation
TEs
updated 17 months ago by 15k • written 17 months ago by ▴ 30
0
votes
1
reply
505
views
Simple sequence repeats (SSR)
Simple Friendly repeats user software sequence
updated 17 months ago by ★ 1.2k • written 17 months ago by ▴ 30
1
vote
1
reply
435
views
Calculating percentage TEs content (%) for a genome
content TE Percentage REPET
updated 17 months ago by ★ 2.4k • written 17 months ago by ▴ 30
1
vote
1
reply
471
views
UltraFast boostrap branch support analysis
IQ-tree phylogenetic bootstraps analysis Ultrafast
updated 19 months ago by ★ 27k • written 19 months ago by ▴ 30
1
vote
1
reply
429
views
Species tree
Species tree
updated 19 months ago by 54k • written 19 months ago by ▴ 30
3
votes
3
replies
1.1k
views
Best software to edit phylogeny trees
edit phylogeny Best software to trees
updated 19 months ago by ▴ 460 • written 19 months ago by ▴ 30
2
votes
1
reply
558
views
InterProScan, Conserved domain database, SMART and PFAM
InterProscan SMART and PFAM CDD
updated 20 months ago by 15k • written 20 months ago by ▴ 30
0
votes
0
replies
295
views
How is query coverage calculated in NCBI BLAST output.
blast
updated 21 months ago by 82k • written 21 months ago by ▴ 30
2
votes
2
replies
635
views
Orthologous genes
BLASTp analilysis Phylogenetic
updated 21 months ago by 27k • written 21 months ago by ▴ 30
1
vote
2
replies
643
views
BLAST IN CLC vs BLAST IN NCBI website
BLAST computational biology
22 months ago by lukhanyomakhabane ▴ 30
0
votes
0
replies
643
views
Comment: Comment: BLAST IN CLC vs BLAST IN NCBI website
22 months ago by lukhanyomakhabane ▴ 30
2
votes
1
reply
460
views
Blastp results
BLASTp
written 22 months ago by ▴ 30
2
votes
2
replies
573
views
How can I analyze a genome with no annotation in NCBI Genbank
BLAST
updated 16 months ago by 43k • written 22 months ago by ▴ 30
8
votes
5
replies
1.2k
views
Checking whether protein sequences have start and stop codon
BLASTp
23 months ago by lukhanyomakhabane ▴ 30
0
votes
0
replies
1.2k
views
Comment: Comment: Checking whether protein sequences have start and stop codon
23 months ago by lukhanyomakhabane ▴ 30
7
votes
4
replies
2.5k
views
Software to draw protein domains of proteins
Protein domains
updated 23 months ago by ★ 3.8k • written 23 months ago by ▴ 30
2
votes
3
replies
715
views
Repeat masked vs Repeat unmasked genome assembly
BLAST
updated 2.1 years ago by ▴ 220 • written 2.1 years ago by ▴ 30
0
votes
1
reply
715
views
Comment: Comment: Repeat masked vs Repeat unmasked genome assembly
2.1 years ago by lukhanyomakhabane ▴ 30
1
vote
1
reply
737
views
RepBase26.12.fasta.tar.gz
RepBase26.12.fasta.tar.gz
updated 21 months ago by ▴ 10 • written 2.3 years ago by ▴ 30
0
votes
2
replies
674
views
Problem renaming headers in multi fasta file using certain scripts
sequence
updated 3.5 years ago by 141k • written 3.5 years ago by ▴ 30
0
votes
3
replies
2.5k
views
How to rename headers of sequences in large fasta file
sequence
updated 3.5 years ago by 14k • written 3.5 years ago by ▴ 30
1
vote
1
reply
496
views
Impact of transposable elements on genome organisation/ shaping genome
genome
3.7 years ago by lukhanyomakhabane ▴ 30
0
votes
4
replies
1.6k
views
How to Extract Multiple Sequence from Multi Fasta File by sequence names
sequence genome
updated 3.7 years ago by ▴ 50 • written 3.7 years ago by ▴ 30
0
votes
0
replies
375
views
Software to determine the impact of transposable elements on gene expression
gene
3.7 years ago by lukhanyomakhabane ▴ 30
0
votes
0
replies
463
views
PiRATE pipeline for detection of transposable elements
genome
3.7 years ago by lukhanyomakhabane ▴ 30
1
vote
1
reply
742
views
Database to download intact autonomouse TEs elements e.g LTR Gyps, LTR Copia and TIR Tc1/mariner
sequence
updated 3.7 years ago by ▴ 10 • written 3.7 years ago by ▴ 30
1
vote
2
replies
1.0k
views
Blasting transposable elements
alignment
3.7 years ago by lukhanyomakhabane ▴ 30
0
votes
0
replies
926
views
Comment: C: Programming language to know when using bioinformatic tools such REPET
3.8 years ago by lukhanyomakhabane ▴ 30
0
votes
1
reply
926
views
Comment: C: Programming language to know when using bioinformatic tools such REPET
3.8 years ago by lukhanyomakhabane ▴ 30
9
votes
7
replies
926
views
Programming language to know when using bioinformatic tools such REPET
R
updated 3.8 years ago by 14k • written 3.8 years ago by ▴ 30
0
votes
0
replies
459
views
Investigating expression of potentially autonomous TEs identified.
RNA-Seq
3.8 years ago by lukhanyomakhabane ▴ 30
0
votes
1
reply
722
views
Identification and annotation of transposable elements in genomes
genome
3.8 years ago by lukhanyomakhabane ▴ 30
33 results • Page 1 of 1
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