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5
votes
3
replies
3.2k
views
IBD calculation with Plink
Plink IBD
updated 4.0 years ago by 10k • written 4.0 years ago by ★ 2.1k
0
votes
1
reply
3.2k
views
Comment: C: Postdoctoral Training Fellow - Bioinformatics (Francis Crick Institute, London)
updated 4.1 years ago by 41k • written 8.4 years ago by ★ 2.1k
0
votes
1
reply
3.1k
views
Comment: C: Concordance analysis using statistics/graphs/figures
updated 4.1 years ago by 41k • written 8.5 years ago by ★ 2.1k
1
vote
1
reply
2.5k
views
Marker vs SNPs vs Biomarker
genotype SNPs
4.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
5.5k
views
Comment: C: Expect Library - Bam-Readcount
updated 4.1 years ago by 41k • written 8.0 years ago by ★ 2.1k
5
votes
7
replies
3.9k
views
How do I find out the adaptor sequences for SRA data?
adaptor sra
updated 4.2 years ago by ▴ 50 • written 4.5 years ago by ★ 2.1k
2
votes
2
replies
820
views
How to find virus sequence with no accession information?
genome HEV71
updated 4.5 years ago by 136k • written 4.5 years ago by ★ 2.1k
0
votes
1
reply
3.9k
views
Comment: C: How do I find out the adaptor sequences for SRA data?
4.5 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.8k
views
log4perl error for RGAugury.pl tool
Rgenes
updated 4.5 years ago by • 0 • written 5.4 years ago by ★ 2.1k
15
votes
1
reply
9.2k
views
What are contig, singleton read and discordant mate pairs?
terminology
updated 16 months ago by 41k • written 7.8 years ago by ★ 2.1k
4
votes
6
replies
2.6k
views
How do I make this perl script work to fetch sequences from NCBI using gene symbols?
perl eutils
updated 4.6 years ago by ▴ 50 • written 5.1 years ago by ★ 2.1k
1
vote
1
reply
1.7k
views
What is the use of PCA in ethnicity correction
pca
updated 4.6 years ago by 20 • written 7.7 years ago by ★ 2.1k
1
vote
2
replies
984
views
Submitting R package in Bioconductor with Plink and vcftools Dependencies
R bioconductor
4.7 years ago by MAPK ★ 2.1k
1
vote
5
replies
1.1k
views
How can I analyze this data in Deseq?
deseq rnaseq deseq2 R
4.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.1k
views
Comment: C: How can I analyze this data in Deseq?
4.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.1k
views
Comment: C: How can I analyze this data in Deseq?
4.7 years ago by MAPK ★ 2.1k
5
votes
7
replies
1.6k
views
Extract coverage from each nucleotide position of a genome in a bam file
bam bed coverage
4.7 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.6k
views
Comment: C: Extract coverage from each nucleotide position of a genome in a bam file
4.7 years ago by MAPK ★ 2.1k
0
votes
2
replies
1.6k
views
Comment: C: Extract coverage from each nucleotide position of a genome in a bam file
4.7 years ago by MAPK ★ 2.1k
9
votes
4
replies
5.4k
views
coverage plot for all chromosomes
RNA-Seq
4.7 years ago by MAPK ★ 2.1k
7
votes
5
replies
23k
views
How to perform KEGG pathway analysis in R?
KEGG
updated 5.0 years ago by ▴ 20 • written 6.2 years ago by ★ 2.1k
0
votes
1
reply
767
views
Where can I find Intergenic regions (non-rRNA), retrotransposons and Ribosomal RNA sequences?
next-gen assembly
updated 5.0 years ago by 35k • written 5.0 years ago by ★ 2.1k
0
votes
0
replies
980
views
Comment: C: How can I map certain values for gene locus against genome?
5.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
980
views
Comment: C: How can I map certain values for gene locus against genome?
5.0 years ago by MAPK ★ 2.1k
3
votes
4
replies
980
views
How can I map certain values for gene locus against genome?
r
5.0 years ago by MAPK ★ 2.1k
5
votes
11
replies
1.1k
views
Adaptor trimming for RNAseq
RNA-Seq
5.0 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.1k
views
Comment: C: Adaptor trimming for RNAseq
5.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.1k
views
Comment: C: Adaptor trimming for RNAseq
5.0 years ago by MAPK ★ 2.1k
0
votes
1
reply
1.1k
views
Comment: C: Adaptor trimming for RNAseq
5.0 years ago by MAPK ★ 2.1k
0
votes
2
replies
895
views
Tools to predict microRNAs in Ascomycota(Fungus)
smallRNA RNA-Seq microRNA
updated 5.1 years ago by ★ 2.3k • written 5.1 years ago by ★ 2.1k
0
votes
0
replies
4.4k
views
Comment: C: desktop bioinformatics platform specs
5.1 years ago by MAPK ★ 2.1k
11
votes
6
replies
2.6k
views
How do I loop over a list of gene symbols to extract sequences from NCBI?
ncbi eutils bash
5.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
2.6k
views
Comment: C: How do I loop over a list of gene symbols to extract sequences from NCBI?
5.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
2.6k
views
Comment: C: How do I loop over a list of gene symbols to extract sequences from NCBI?
5.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
3.8k
views
Comment: C: How do I set filter for NCBI esearch to get fasta for Genes only?
5.1 years ago by MAPK ★ 2.1k
18
votes
7
replies
3.8k
views
How do I set filter for NCBI esearch to get fasta for Genes only?
esearch
5.1 years ago by MAPK ★ 2.1k
0
votes
2
replies
3.8k
views
Comment: C: How do I set filter for NCBI esearch to get fasta for Genes only?
5.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
2.6k
views
Comment: C: How do I make this perl script work to fetch sequences from NCBI using gene symb
5.1 years ago by MAPK ★ 2.1k
0
votes
1
reply
2.6k
views
Comment: C: How do I make this perl script work to fetch sequences from NCBI using gene symb
5.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.7k
views
Comment: C: DEseq2 logfold interpretation
5.1 years ago by MAPK ★ 2.1k
9
votes
3
replies
1.7k
views
DEseq2 logfold interpretation
DEseq2 RNA-Seq
5.1 years ago by MAPK ★ 2.1k
6
votes
5
replies
1.2k
views
Extract sequence ID from Fasta for a given sequence
Fasta
updated 5.1 years ago by ★ 3.8k • written 5.1 years ago by ★ 2.1k
0
votes
0
replies
1.2k
views
Comment: C: Extract sequence ID from Fasta for a given sequence
5.1 years ago by MAPK ★ 2.1k
0
votes
3
replies
2.0k
views
How to submit paired-end fastq files of a single sample to SRA?
sra
updated 5.1 years ago by 20 • written 5.3 years ago by ★ 2.1k
0
votes
0
replies
1.7k
views
Microbiome data analysis using Vegan R tool
vegan microbiome
updated 5.1 years ago by 20 • written 5.2 years ago by ★ 2.1k
0
votes
1
reply
1.1k
views
Comment: C: What is the fate of low coverage region during Trinity assembly of transcriptome
5.1 years ago by MAPK ★ 2.1k
1
vote
3
replies
1.1k
views
What is the fate of low coverage region during Trinity assembly of transcriptome data?
Trinity transcriptome Assembly
5.1 years ago by MAPK ★ 2.1k
0
votes
0
replies
1.3k
views
Comment: C: Dealing with NAs in microbiome transcriptome count data for differential express
5.2 years ago by MAPK ★ 2.1k
0
votes
2
replies
1.3k
views
Dealing with NAs in microbiome transcriptome count data for differential expression
RNA-Seq Deseq2 microbiome
5.2 years ago by MAPK ★ 2.1k
0
votes
0
replies
2.3k
views
Comment: C: How do you identify the contigs from trinity assembly?
5.2 years ago by MAPK ★ 2.1k
560 results • Page 3 of 12
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