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995 results • Page
4 of 20
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Views
Votes
Replies
5
votes
6
replies
531
views
Programmatically retrieving positions of protein active site residues
Uniprot
PDB
Proteins
updated 7 days ago by
me
▴ 760 • written 8 days ago by
Mariana
▴ 40
1
vote
1
reply
236
views
Adjust pvalue in R with different approach give me all different outcome
statistics
R
p-value
updated 7 days ago by
Ram
43k • written 7 days ago by
Jonathan Yoou
▴ 60
1
vote
2
replies
296
views
Minimum RAM and Storage requirement for creating PSSM using ncbi-blast-2.2.30+-x64-linux
blast
pssm
6 days ago by
Nafi
• 0
1
vote
3
replies
286
views
What does 'bundle_uuid' refer to in this metadata sheet?
SRA
illumina
GEO
metadata
updated 7 days ago by
GenoMax
142k • written 7 days ago by
jeffrey.maurer.informatics
• 0
1
vote
3
replies
283
views
ERROR When Using Ensembl Plants Biomart Wget API
biomart
plant
ensembl
2 days ago by
Dora
▴ 10
0
votes
0
replies
169
views
News:
Goodbye, Slow Code? How BioNumpy can Redefine Python’s Role in Bioinformatics!
BioNumPy
Python
NumPy
updated 7 days ago by
Ram
43k • written 7 days ago by
Chakri
• 0
0
votes
2
replies
228
views
RNA editing sites based on DNA seq and RNA seq
RNA-editing
18 hours ago by
Ahiad Chen Zion
• 0
1
vote
5
replies
334
views
Introduce SNPs on FASTA
simulation
snps
haplotypes
pharmacogenetics
4 days ago by
Riccardo
▴ 10
0
votes
0
replies
133
views
News:
Online course: Meta-analysis in R - last 2 seats left
Meta-Analysis
Statistics
R
updated 7 days ago by
Ram
43k • written 7 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
128
views
Somatic variant calling with Mutect2 using 2 matched-normals for one sample
cancer
mutect
variant-calling
GATK
somatic-variants
updated 7 days ago by
Ram
43k • written 7 days ago by
Alexandros
• 0
0
votes
1
reply
175
views
unable to get feature count results
featureCounts
updated 7 days ago by
Ram
43k • written 7 days ago by
Ravita
• 0
0
votes
3
replies
291
views
KEGG Pathways
r
RNA-seq
updated 7 days ago by
Ram
43k • written 7 days ago by
Sudip
• 0
4
votes
6
replies
3.9k
views
Taking the difference of two VCFs (or removing singletons)
genome
sequencing
singleton
SNP
filter
updated 7 days ago by
Andres
▴ 20 • written 9.6 years ago by
hermathena
▴ 40
0
votes
0
replies
135
views
Seurat object reductions (PCA, UMAP,..) after subsetting data
Seurat
7 days ago by
Bine
▴ 60
0
votes
1
reply
292
views
News:
FINAL CALL: 8th Berlin Summer School in NGS Data Analysis - Only a few last places available
DNA-seq
variant-calling
RNA-seq
illumina
transcriptomics
7 days ago by
David Langenberger
11k
0
votes
1
reply
192
views
Deseq2
Deseq2
updated 7 days ago by
Jack Tierney
▴ 360 • written 8 days ago by
Sudip
• 0
1
vote
1
reply
239
views
Polishing genome assembly
polishing
Nanopore
PacBio
updated 7 days ago by
Michael
54k • written 8 days ago by
Lissa Cruz Saavedra
• 0
5
votes
3
replies
287
views
6 follow
Integrate transcriptomic data and proteomics data.
OMICS
updated 7 days ago by
Lluís R.
★ 1.2k • written 8 days ago by
이민경[학생](대학원 융합의과학과)
• 0
2
votes
2
replies
204
views
MA plot of shrunken fold change
MA-plot
Deseq2
updated 8 days ago by
ATpoint
82k • written 8 days ago by
Sudip
• 0
1
vote
2
replies
229
views
Need help for downloading arabdopsis thaliana reference genome fasta file and gtf file
Arabidopsis-thaliana
gtf
reference-genome
updated 7 days ago by
Ram
43k • written 8 days ago by
Ravita
• 0
3
votes
3
replies
224
views
Gene Specific coverage from WGS data
linux
WGS
Bioinformatics
SARS
CoV2
1 day ago by
Adyasha
• 0
0
votes
0
replies
116
views
human gut metagenome taxonomy profile table and KO profile table from big cohort
metagenome
gut
human
8 days ago by
fanglujing
▴ 60
0
votes
0
replies
134
views
Are some metagenomes too complex for MAGs?
metagenomics
metagenome
MAGs
assembly
8 days ago by
Jacob
• 0
0
votes
3
replies
748
views
Why cd-hit-est not work when sequence identity threshold<0.95?
genome
cluster
sequence
updated 8 days ago by
weidonglu
• 0 • written 21 months ago by
JZX
• 0
0
votes
4
replies
282
views
Perfom a Gene Ontology Analysis from GO terms txt file
RNA-Seq
GO
updated 8 days ago by
Ram
43k • written 8 days ago by
Hamtaro
▴ 50
0
votes
1
reply
185
views
Differential Accessibility
DiffBind
updated 8 days ago by
Ram
43k • written 8 days ago by
Shloka
• 0
0
votes
3
replies
296
views
Landmark gene selection in L1000.
L1000
landmark-gene
cmap
updated 7 days ago by
GenoMax
142k • written 8 days ago by
kim
• 0
3
votes
2
replies
388
views
Extract protein sequence
fasta
alignment
blast
7 days ago by
anna
▴ 20
3
votes
3
replies
325
views
Is it possible to bulk download files from GEO repository?
RNA-seq
Galaxy
Tanscriptomics
updated 8 days ago by
noodle
▴ 580 • written 9 days ago by
WUSCHEL
▴ 750
0
votes
1
reply
170
views
metagenomic virome quality assessment
viromics
metagenomics
updated 8 days ago by
Ram
43k • written 8 days ago by
Petchimuthu
• 0
3
votes
7
replies
351
views
FastQC Quality per tile and per sequence behaving strange after using Cutadapt
fastqc
cutadapt
illumina
tile
paired-end
8 days ago by
salias
• 0
0
votes
0
replies
128
views
Using limma in methylation EM-seq?
EM-seq
methylation
8 days ago by
Lluís R.
★ 1.2k
4
votes
7
replies
594
views
Very low RNA splicing rate for pulmonary AT2 cells
RNA-velocity
scVelo
scRNA-seq
splicing
8 days ago by
e.r.zakiev
▴ 210
0
votes
0
replies
125
views
Synteny analysis
bacterial
synteny
genome
updated 8 days ago by
GenoMax
142k • written 8 days ago by
Namil
• 0
0
votes
4
replies
267
views
Genbank File Format
gbkformat
7 days ago by
alenew.am
• 0
0
votes
5
replies
434
views
How should I make kallisto indexes?
kallisto
updated 8 days ago by
dsull
★ 6.0k • written 22 days ago by
bioinfo
▴ 150
0
votes
0
replies
242
views
Assist me in determining whether the analysis process using the limma package has been executed correctly
limma
ArrayExpress
DifferentialExpression
GEOquery
8 days ago by
SSSJec
• 0
0
votes
3
replies
222
views
Software to separate reads from different individuals
software
development
nanopore
updated 8 days ago by
GenoMax
142k • written 8 days ago by
njornet
▴ 20
0
votes
2
replies
257
views
How to update R on ubuntu
installation
update
R
apt-get
8 days ago by
Bosberg
▴ 50
4
votes
0
replies
140
views
Herald:
The Biostar Herald for Monday, April 29, 2024
herald
8 days ago by
Biostar
2.7k
1
vote
1
reply
147
views
Two references 1. genome 2. plasmid for bowtie2
WGS
BacterialGenomics
Alignment
updated 8 days ago by
GenoMax
142k • written 9 days ago by
Ruqaiya
• 0
0
votes
1
reply
276
views
Using Delly/Pindel/breakdancer for Identifying Transgene Insertion Sites in Mouse Genome
breakdancer
insertion
Pindel
variation
Delly
updated 8 days ago by
trausch
★ 1.9k • written 25 days ago by
zec018
• 0
0
votes
0
replies
111
views
LEfSe
LEfSe
8 days ago by
benkosta
• 0
0
votes
0
replies
93
views
How should I handle read counts derived from SGSeq when I want to build DEXSeqDataSet object
DEXSeq
DEXSeqDataSet
SGSeq
8 days ago by
Sara
▴ 30
1
vote
4
replies
408
views
Limma Analysis Agilent Microarray Data (GPL1708)
Microarray
Limma
Agilent
8 days ago by
hagl
▴ 10
0
votes
5
replies
321
views
RNAseq one control two conditions, shared and exclusive genes
conditions
RNAseq
multiple
Rstudio
updated 5 days ago by
Mohamed Abderrahmane
▴ 20 • written 8 days ago by
matteo.levorato
• 0
0
votes
2
replies
163
views
Longitudinal analysis of subpopulations: which approach is better?
differential-expression
DEG
model
8 days ago by
Lluís R.
★ 1.2k
0
votes
1
reply
149
views
How to solve DESeq2 Error in checkFullRank(modelMatrix)?
RNA-Seq
DESeq2
updated 8 days ago by
i.sudbery
19k • written 9 days ago by
DOBI
• 0
0
votes
0
replies
104
views
Comparing peptide sequences with MS/MS peptide data using MaxQuant
Transcriptomics
Mass
Bioinformatics
spectrometry
Proteins
9 days ago by
atharvakarkare14
▴ 30
7
votes
16
replies
756
views
How many reads for WGS Sequencing?
WGS
Bacterial-Genomics
9 days ago by
Ruqaiya
• 0
995 results • Page
4 of 20
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The seven genotypes being 58025AA, 58025AG, 58051TT, 58051TC, 58051CC, 58057TT, 58057TC
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