updated 9 days ago by
Ram
43k
•
written 9 days ago by
bioinfo223
▴
10
0
votes
0
replies
160
views
0
votes
0
replies
178
views
9 days ago by
P.
•
0
0
votes
0
replies
168
views
1
vote
1
reply
408
views
0
votes
0
replies
180
views
0
votes
1
reply
270
views
0
votes
4
replies
584
views
1
vote
1
reply
226
views
updated 10 days ago by
Ram
43k
•
written 10 days ago by
jammydodger123456
▴
40
0
votes
2
replies
374
views
10 days ago by
22211020193
•
0
0
votes
0
replies
167
views
1
vote
2
replies
277
views
updated 10 days ago by
Ram
43k
•
written 10 days ago by
aniigodwinn
•
0
0
votes
0
replies
357
views
2
votes
7
replies
830
views
updated 9 days ago by
noodle
▴
520
•
written 10 days ago by
quentinperriere
•
0
0
votes
1
reply
200
views
updated 10 days ago by
DKA
▴
40
•
written 10 days ago by
james.melhorn
•
0
0
votes
1
reply
189
views
0
votes
0
replies
158
views
10 days ago by
chemokine-1
▴
10
0
votes
4
replies
509
views
9 days ago by
feather-W
•
0
0
votes
2
replies
227
views
0
votes
0
replies
170
views
10 days ago by
Ali
•
0
2
votes
4
replies
322
views
10 days ago by
kirill.zaslavsky
•
0
0
votes
2
replies
252
views
0
votes
0
replies
144
views
0
votes
0
replies
134
views
0
votes
0
replies
162
views
1
vote
1
reply
181
views
0
votes
0
replies
143
views
11 days ago by
solomoncharles77
▴
90
0
votes
2
replies
320
views
9 days ago by
Sudip
•
0
0
votes
0
replies
123
views
2
votes
5
replies
459
views
0
votes
2
replies
260
views
1
vote
2
replies
273
views
0
votes
1
reply
195
views
0
votes
1
reply
209
views
updated 12 days ago by
Ram
43k
•
written 12 days ago by
michelle.swarovski
•
0
0
votes
1
reply
211
views
updated 12 days ago by
GenoMax
141k
•
written 12 days ago by
haiying.kong
▴
360
0
votes
2
replies
264
views
11 days ago by
matteo.levorato
•
0
1
vote
0
replies
143
views
0
votes
0
replies
156
views
2
votes
0
replies
207
views
1
vote
1
reply
184
views
0
votes
0
replies
140
views
12 days ago by
Balazs Horvath
▴
10
0
votes
0
replies
144
views
0
votes
0
replies
153
views
12 days ago by
quentinperriere
•
0
0
votes
2
replies
254
views
10 days ago by
DKA
▴
40
0
votes
0
replies
164
views
0
votes
2
replies
297
views
0
votes
0
replies
192
views
1
vote
3
replies
355
views
updated 11 days ago by
ATpoint
82k
•
written 13 days ago by
naveedhasan2000
•
0
1
vote
2
replies
320
views
updated 12 days ago by
Istvan Albert
100k
•
written 13 days ago by
Jiang
•
0
0
votes
0
replies
192
views
14 days ago by
YiweiZhu
▴
30
0
votes
2
replies
317
views
Recent Votes
Recent Locations •
All
Perth, Australia, 3 minutes ago
USA, 11 minutes ago
Australia, 14 minutes ago
China, 18 minutes ago
United States, 21 minutes ago
Palau, 21 minutes ago
Bangladesh, 24 minutes ago
Recent Awards •
All
Popular Question to
a_bis
▴
40
Popular Question to
anna
▴
20
Popular Question to
rohitsatyam102
▴
850
Popular Question to
candron
▴
10
Scholar to
Alex Reynolds
35k
Popular Question to
chaco001
▴
40
Recent Replies
Comment: gvcf joint calling
by
Jeremy Leipzig
22k
the samples that are `./.` have no coverage (or not enough to call a genotype) and the `0/0` are homozygous reference
Answer: How many reads for WGS Sequencing?
by
GenoMax
141k
Did you download the complete dataset available from ENA/NCBI SRA? This is an older dataset (from 2012) with a total of 1146212 reads and 1…
Comment: When to use .vcf or .gvcf files from GATK HaplotypeCaller?
by
zihanss
•
0
Hello, I want to know that why my gVCF files have "./." besides "0/0", "1/1"?
Thanks
Comment: gvcf joint calling
by
zihanss
•
0
![enter image description here][1]
[1]: /media/images/15eedc1a-b2c6-4966-be39-b5173dab
And I confused with the file that has "./." and…
Comment: gvcf joint calling
by
zihanss
•
0
![enter image description here][1]
[1]: /media/images/16fd502c-4e01-4f56-8562-0e0d4aac
Okay, this is the merged gVCF file.
Comment: Help understanding how KEGG Ortholog `K00004 ` has 3 ECs associated with it (EC:
by
Mensur Dlakic
★
27k
Enzymes under the umbrella of `1.1.1.-` work `with NAD(+) or NADP(+) as acceptor`. That only tells you about their cofactors, but not about…
Comment: NGS forensics: how to know if data is fabricated
by
dsull
★
5.9k
I don't think people have undertaken the effort to create an anomaly detector for RNAseq -- people's efforts are dedicated towards developi…
Comment: NGS forensics: how to know if data is fabricated
by
dsull
★
5.9k
I'd say post on pubpeer -- it's the best forum for this sort of discussion.
As for what additional analysis I recommend: I'd say look at s…
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
520
> This is a super-interesting question from an algorithmic standpoint
Ya, I was hoping to find some algorithm that would compare say a 're…
Comment: ScRNAseq-How to correctly choose cell type marker genes
by
Francesco
▴
10
Thank you for your valuable suggestion!
Comment: NGS forensics: how to know if data is fabricated
by
noodle
▴
520
> My first question would be how strong your background in such analysis
> is.
Very strong. PhD+several years working in the field.
> Wot…
Comment: NGS forensics: how to know if data is fabricated
by
ATpoint
82k
My first question would be how strong your background in such analysis is. Claim of fabrication is very serious, so be 100% sure to back it…
Answer: NGS forensics: how to know if data is fabricated
by
Jeremy Leipzig
22k
This is a super-interesting question from an algorithmic standpoint (devising a model that can distinguish real from synthetic reads) but I…
Answer: absolute path for symbolic links in Snakefile
by
Jesse
▴
740
It's nothing to do with Snakemake, just the ordinary confusion of making relative symlinks when your working directory is somewhere else. …
Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
by
Jesse
▴
740
[seqmagick](https://github.com/fhcrc/seqmagick/) has a `--squeeze-threshold` option that does just this. For example with an MSA of five s…
Traffic: 1591 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6