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1,000 results • Page
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News:
ISMB-affiliated virtual tutorial on Neo4j/Cypher for life sciences
neo4j
cypher
graph
knowledge
13 months ago by
Stephen
• 0
0
votes
0
replies
485
views
News:
Announcing workshop on Declarative Programming in Biology and Medicine (Seattle, Sept. 2023)
medicine
declmed
declarative
icfp
precision
12 months ago by
Stephen
• 0
0
votes
0
replies
423
views
News:
Course live online Introduction to Bayesian Analyses using R, May 8th-12th, 2023
bayesian
RProject
course
online
13 months ago by
Sole
• 0
0
votes
2
replies
887
views
News:
Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics
Metatranscriptomics
Multiomics
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
10
votes
4
replies
1.3k
views
News:
RNA-Seq Data Analysis Workshop - Join us in Berlin, Germany from March 27-30, 2023!
NGS
transcriptomics
workshop
updated 13 months ago by
kng
▴ 30 • written 14 months ago by
David Langenberger
11k
1
vote
0
replies
943
views
News:
Summer School in Bioinformatics
Genomics
Docker
RNA-seq
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
1
vote
1
reply
674
views
News:
Sign-ups for the St. Jude KIDS23 BioHackathon (May 3-5th) open through March 15th!
stjude
hackathon
13 months ago by
jared.andrews07
★ 16k
1
vote
0
replies
438
views
News:
Course - BIOINFORMATIC ANALYSIS OF TRANSPOSABLE ELEMENTS
Transposable-Elements
TE
Genome-Assembly
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
443
views
News:
Environmental Metagenomics course
Environmental-Metagenomics
updated 13 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
421
views
News:
Course - GENERALIZED LINEAR MODELS in R
GLM
R
Generalised-Linear-Model
updated 11 months ago by
Ram
43k • written 13 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
490
views
News:
Virtual Single Cell RNA-seq Workshop
single
genomics
cell
expression
rna-seq
workshop
gene
14 months ago by
mia.nahom
▴ 10
1
vote
0
replies
449
views
News:
Advanced Bayesian statistics in R course
Statistics
RegressionModeling
Bayesian
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
379
views
News:
Course - INTRODUCTION TO THE ANALYSIS OF LONGITUDINAL DATA WITH R
Genomics
LongitudinalData
R
14 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
909
views
News:
The GDC Legacy Archive is retiring soon.
genomic-data-commons
tcga
gdc
updated 14 months ago by
Ram
43k • written 14 months ago by
Zhenyu Zhang
★ 1.2k
0
votes
0
replies
448
views
News:
course MULTIVARIATE DATA ANALYSIS WITH R AND VEGAN
Vegan
MULTIVARIATEDATAANALYSIS
Statistics
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
386
views
News:
course - single-cell RNAseq with R/Bioconductor
Bioconductor
single-cell
genomics
RNAseq
updated 13 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
573
views
News:
Course - Analysis of PROKARYOTIC PANGENOMES
Genomics
Pangenomes
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
5
votes
3
replies
910
views
News:
March 13-16: Virtual Nextflow and nf-core training event in 5 languages
nf-core
pipeline
Nextflow
updated 13 months ago by
Maxime Garcia
▴ 340 • written 14 months ago by
Matthias Zepper
4.5k
0
votes
1
reply
421
views
News:
Courses in March. -still a few seats available
Bioconductor
Genomics
R
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
392
views
News:
course - Next steps in applied Bayesian regression modeling
Statistics
RegressionModeling
Bayesian
R
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
476
views
News:
Introduction to GWAS course in June
GWAS
R
updated 13 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
740
views
News:
Introduction to GWAS course (6th edition) - June, 5th-8th
GWAS
R
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
356
views
News:
Course - Version Control for Researchers
VersionControl
GIT
Github
14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
506
views
News:
Course - INTRODUCTION TO PYTHON PROGRAMMING FOR BIOLOGISTS
Programming
Python
updated 14 months ago by
Ram
43k • written 14 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
396
views
News:
Eukaryotic Metabarcoding course
eDNA
Metabarcoding
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
3
replies
882
views
News:
NCBI update complete. Aspera users please update your client.
NCBI
Submissions
GenBank
14 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
375
views
News:
Course - Mass Spectrometry and Proteomics in R/Bioconductor
Bioconductor
MassSpectrometry
R
Proteomics
15 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
588
views
News:
Course - Machine Learning in R (for omics data)
Genomics
omics
MachineLearning
R
15 months ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
420
views
News:
Course - Reproducibility in Bioinformatics
Reproducibility
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
382
views
News:
course - Multivariate data analysis with R and vegan
Statistics
MultivariateAnalysis
R
vegan
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
1.1k
views
News:
Online Course - A Practical Introduction to NGS Data Analysis (February 01-03, 2023)
NGS
DNAseq
variant-calling
RNAseq
15 months ago by
David Langenberger
11k
0
votes
0
replies
468
views
News:
Bioinformatics courses in February
Genomics
Bioinformatics-Training
updated 10 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.3k
views
News:
Reminder: NCBI Aspera access, update Aspera Connect by Feb 1, 2023
Aspera
NCBI
SRA
GenBank
15 months ago by
PeterC_NCBI
▴ 410
1
vote
2
replies
680
views
News:
Course: Network Analysis in R
NetworkAnalyis
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
475
views
News:
de novo RNA-seq Analysis Workshop
virtual
workshop
rna
transcriptome
15 months ago by
mia.nahom
▴ 10
0
votes
0
replies
620
views
News:
Genomic Prediction course
Selective-Breeding
Genomic-Prediction
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
690
views
News:
course: Meta-analysis in R
Statistics
MetaAnalysis
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
553
views
News:
GSEA in R/Bioconductor course
Bioconductor
R
GSEA
GeneSetEnrichmentAnalysis
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
937
views
News:
For NCBI Aspera access, update Aspera Connect by Feb 1, 2023
Aspera
NCBI
GenBank
15 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
472
views
News:
Metabarcoding in Microbial Ecology
Metabarcoding
Qiime2
16S
MicrobialEcology
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
441
views
News:
Metagenomics tools recommeder system
NGS
Metagenomics
Recommender-system
updated 15 months ago by
Ram
43k • written 15 months ago by
KATA
• 0
0
votes
0
replies
744
views
News:
Hands-On NGS Data Analysis Workshops 2023
NGS
Workshop
RNA-Seq
DNA-Seq
15 months ago by
David Langenberger
11k
1
vote
5
replies
1.1k
views
News:
Cancer Genomics course - 2 seats left
Genomics
Cancer-Genomics
R
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
449
views
News:
Course on Generalised Additive Models In R
Statistics
GAMs
R
15 months ago by
carlopecoraro2
★ 2.5k
0
votes
1
reply
654
views
News:
Sex Chromosome Evolution course
Genomics
Sex-Chromosome-Evolution
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
2
replies
1.8k
views
News:
New chat server (Discord) for bioinformatics
community
15 months ago by
Samuel Lampa
★ 1.3k
0
votes
0
replies
649
views
News:
Online course - Genome Assembly and Annotation
Long-reads
Genome-Annotation
Biodiversity
Genome-Assembly
updated 15 months ago by
Ram
43k • written 15 months ago by
carlopecoraro2
★ 2.5k
1
vote
3
replies
921
views
News:
NCBI BLAST ClusteredNR database now available for blastx and PSI-BLAST searches
PSI-BLAST
blastx
BLAST
NCBI
ClusteredNR
15 months ago by
PeterC_NCBI
▴ 410
0
votes
0
replies
594
views
News:
Winter School in Bioinformatics - last seats available
Genomics
Unix
RNA-seq
docker
updated 15 months ago by
Ram
43k • written 16 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
508
views
News:
Virtual RNA-seq Analysis (Model Organism) Workshop
virtual
expression
rna-seq
analysis
workshop
16 months ago by
mia.nahom
▴ 10
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Comment: NGS forensics: how to know if data is fabricated
Comment: NGS forensics: how to know if data is fabricated
Answer: How to use limma to find differentially expressed genes in response to a continu
Batch effects : ComBat or removebatcheffects (limma package) ?
How to input margin to UpsetR figure
Comment: How to assign cell types after integration in scRNA
NGS forensics: how to know if data is fabricated
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Answer: NGS forensics: how to know if data is fabricated
by
Mensur Dlakic
★ 27k
I share the opinion by @philippbayer I have seen enough questionable things in life and in science to keep me permanently jaded, but there…
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
I downloaded the data in two files from the link you provided. With this command: megahit -1 ERR072246_1.fastq.gz -2 ERR072246_2.fastq…
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
If you have Linux the assembly should work on your system, but 8 GB is generally not enough for assembling larger genomes.
Comment: How many reads for WGS Sequencing?
by
Mensur Dlakic
★ 27k
I think you might be getting stuck on less relevant parts of my exercise. The most important point was that nothing is wrong with the data.…
Comment: What does it mean single base resolution in sequencing?
by
dsull
★ 5.9k
Great comprehensive explanation and overview of the technologies -- with regards to sequencing assays, the one thing I'd add is SNV identif…
Answer: What does it mean single base resolution in sequencing?
by
dsull
★ 5.9k
I think that term means slightly different things in different contexts. For example, it's useful to profile mRNA modifications (e.g. m6a) …
Comment: Cannot process all the reads in a fast5 file?
by
chujie
• 0
Hi, I met the same problem, have you found the solution?
Answer: What does it mean single base resolution in sequencing?
by
LauferVA
4.2k
Hi @fe3e6f65 , In a single sentence, the answer to your question can be summarized as, "*the resolution of a genomic technology refers to …
Comment: PCA plot
by
LauferVA
4.2k
Without more context, we cannot interpret this PCA plot. There are many possibilities. In addition, this question is basic enough that it w…
Comment: NGS forensics: how to know if data is fabricated
by
Jeremy Leipzig
22k
i have the name ready: out**liar**
Comment: What does it mean single base resolution in sequencing?
by
GenoMax
141k
Sequencing by hybridization (https://en.wikipedia.org/wiki/Sequencing_by_hybridization ) is likely not giving you single base resolution. B…
Comment: Fetch table from clinvar database according to a list of rsid
by
ashaneev07
▴ 20
Hii... i have updated the script in python..But, still getting no data found. Actually the data is there, i have print the parsed html file…
Comment: How to assign cell types after integration in scRNA
by
ATpoint
82k
https://bioconductor.org/books/release/OSCA.multisample/using-corrected-values.html
Comment: Downloading full alignments from Pfam
by
GenoMax
141k
Not as convenient but the entire set of full alignments can be downloaded here: https://ftp.ebi.ac.uk/pub/databases/Pfam/current_release/Pf…
Comment: How many reads for WGS Sequencing?
by
GenoMax
141k
> What does clipped Fastq mean? Probably means that NCBI has already scanned and trimmed adapter sequencers. > both forward and revers…
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