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2
votes
3
replies
1.2k
views
what is the corelation between Elastic net method and GAIA method?
genes prediction
updated 3.4 years ago by 88k • written 3.5 years ago by ▴ 260
5
votes
7
replies
2.2k
views
How to find the functions of Reactome pathways?
Pathways reactome pathways DAVID
updated 3.5 years ago by ▴ 580 • written 6.5 years ago by ▴ 260
63
votes
95
replies
23k
views
8 follow
How to extract the list of genes from TCGA CNV data
TCGA CNV genes
updated 22 months ago by ▴ 10 • written 6.6 years ago by ▴ 260
9
votes
11
replies
2.9k
views
Is there any available code for DeSeq2 method in R?
R DeSeq2
updated 4.2 years ago by 13k • written 4.2 years ago by ▴ 260
13
votes
13
replies
2.4k
views
how to classify a list of disease genes ?
genes classsification matlab python
updated 4.5 years ago by 20 • written 7.5 years ago by ▴ 260
2
votes
5
replies
1.0k
views
how to define new discovered genes from list of genes?
genes genome machine learning new genes
4.5 years ago by Chaimaa ▴ 260
6
votes
10
replies
2.6k
views
is GDC portal have COLORECTAL (COADREAD) cancer ?
cancer gene expression
4.7 years ago by Chaimaa ▴ 260
5
votes
6
replies
1.6k
views
how to get Cinical drug response data from broad GDAC firehose?
drugs
updated 4.8 years ago by 88k • written 4.8 years ago by ▴ 260
8
votes
16
replies
1.7k
views
what is the ideal normalistation methods for TCGA gene expression or DNA methylation dtasets?
gene next-gen
4.9 years ago by Chaimaa ▴ 260
0
votes
0
replies
658
views
what's the reason behind no genes at the minimum squarred error (MSE)?
gene
4.9 years ago by Chaimaa ▴ 260
0
votes
0
replies
571
views
comparison between GAIA method and previous methods?
R
4.9 years ago by Chaimaa ▴ 260
2
votes
4
replies
977
views
how to remove the overlap in the chromosome numbers?
R
updated 4.9 years ago by 35k • written 4.9 years ago by ▴ 260
16
votes
8
replies
7.5k
views
How to calculate the Pearson correlation coefficients between a list of genes?
PCC genes list
updated 3.6 years ago by 88k • written 5.9 years ago by ▴ 260
10
votes
11
replies
1.8k
views
How to identify dysregulated pathways using Support Vector machine (SVM)?
SVM
6.0 years ago by Chaimaa ▴ 260
1
vote
2
replies
1.4k
views
how to construct a gene expression network using PCIT package?
networks gene association
updated 6.0 years ago by 20 • written 6.1 years ago by ▴ 260
7
votes
29
replies
2.9k
views
What's the powerful biological methods for significant genes selection?
gene selection significant biological method R
6.0 years ago by Chaimaa ▴ 260
0
votes
1
reply
982
views
How to get only specific samples from CNV data ?
CNV TCGA
6.1 years ago by Chaimaa ▴ 260
0
votes
1
reply
1.6k
views
How to convert a CNV data into a matrix of row samples and column genes
CNV processing
updated 6.1 years ago by 16k • written 6.1 years ago by ▴ 260
12
votes
10
replies
1.9k
views
how to validate a list of genes?
genes
updated 6.3 years ago by 36k • written 6.3 years ago by ▴ 260
1
vote
3
replies
3.1k
views
How to divide a data set into training and testing data set in MATLAB using cross-validation?
dataset cross-validation
6.6 years ago by Chaimaa ▴ 260
9
votes
5
replies
4.1k
views
What's the interpretation behind Pathway enrichment analysis
networks pathway enrichment analysis gene
updated 7.2 years ago by 20 • written 7.4 years ago by ▴ 260
1
vote
3
replies
1.9k
views
How to draw many graphs in one graph in Cytoscape with different colors ?
Cytoscape graph colors
updated 7.4 years ago by 27k • written 7.4 years ago by ▴ 260
11
votes
17
replies
9.1k
views
why spectral clustering show a warning?
spectral dense graph adjacency matrix
updated 7.5 years ago by 27k • written 7.5 years ago by ▴ 260
3
votes
2
replies
1.6k
views
How to find the neighbors of a sparce network using PPI network??
sparce network PPI network
updated 7.5 years ago by ★ 5.2k • written 7.5 years ago by ▴ 260
19
votes
16
replies
5.8k
views
8 follow
What's Pathway Enrichment Analysis?
genes/proteins pathway enrichment analysis
updated 7.5 years ago by ★ 1.2k • written 7.5 years ago by ▴ 260
1
vote
10
replies
2.4k
views
what Markov clustering and random walk with restart need as input ?
MCL RWR Matlab networks
updated 7.5 years ago by 27k • written 7.5 years ago by ▴ 260
2
votes
12
replies
1.5k
views
how the duplicated interactions looks like in HPRD data ?
HPRD
7.5 years ago by Chaimaa ▴ 260
0
votes
0
replies
1.3k
views
10 Cross validation and training and testing set?
cross-validation lasso method
7.6 years ago by Chaimaa ▴ 260
3
votes
12
replies
1.9k
views
Which Conversion tool is more good?
geneID geneName annotation conversion tools
updated 7.6 years ago by 104k • written 7.6 years ago by ▴ 260
5
votes
16
replies
3.4k
views
how to link list of genes using PPI networks?
disease genes PPI networks
updated 7.6 years ago by 27k • written 7.6 years ago by ▴ 260
0
votes
3
replies
2.3k
views
Hi, i have got a CNV data from TCGA and i want to apply Gistic to extract the wide peaks and genes in each widee peak as well as cytoband?
SNP gene
7.7 years ago by Chaimaa ▴ 260
31 results • Page 1 of 1
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