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0
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124
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determination of miRNA FPKM value
mirdeep2 fpkm cufflinks
4 months ago by MS ▴ 30
1
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2
replies
339
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Tumor cell percentage detection tool
cfdna percentage Tumor maftools inferheterogeneity
updated 4 months ago by ★ 4.5k • written 8 months ago by ▴ 30
0
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1
reply
304
views
How to get vafCol converting annovar outputs to maf object
inferHeterogeneity maftools annovarToMaf
updated 5 months ago by ▴ 90 • written 10 months ago by ▴ 30
0
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1
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232
views
Comment: Comment: Tutorial for ROC curve analysis using DE RNA data in R
5 months ago by MS ▴ 30
0
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3
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232
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Tutorial for ROC curve analysis using DE RNA data in R
ROC
updated 5 months ago by ★ 4.5k • written 5 months ago by ▴ 30
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6
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520
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Unsupervised hierarchical clustering of DEG in Rstudio
hclust clustering Unsupervised DEGclustering
updated 6 months ago by ★ 13k • written 6 months ago by ▴ 30
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1
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520
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Comment: Comment: Unsupervised hierarchical clustering of DEG in Rstudio
6 months ago by MS ▴ 30
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1
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520
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Comment: Comment: Unsupervised hierarchical clustering of DEG in Rstudio
6 months ago by MS ▴ 30
0
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0
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556
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Comment: Comment: How to merge miRDeep2 counts for DeSeq2 analysis?
8 months ago by MS ▴ 30
2
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4
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556
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How to merge miRDeep2 counts for DeSeq2 analysis?
DEmiRNA miRDeep2 smallRNA-SEQ
8 months ago by MS ▴ 30
0
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0
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556
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Comment: Comment: How to merge miRDeep2 counts for DeSeq2 analysis?
8 months ago by MS ▴ 30
0
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0
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237
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Immune cell heterogeneity clustering using CIBERSORT output
cell immune hierarchical cibersort clustering heterogeneity Deconvolution
8 months ago by MS ▴ 30
1
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3
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611
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Header error while converting sam file to bam
errorconvertsamtobam samtools bowtie samtoolsheadererror
updated 8 months ago by ▴ 110 • written 8 months ago by ▴ 30
0
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0
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611
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Comment: Comment: Header error while converting sam file to bam
8 months ago by MS ▴ 30
3
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2
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893
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CIBERSORT input file for RNA-Seq data
Cibersort RNA-Seq
8 months ago by MS ▴ 30
0
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0
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893
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Answer: Answer: CIBERSORT input file for RNA-Seq data
8 months ago by MS ▴ 30
0
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0
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279
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Comparison of ChIPseeker and GREAT peak annotations
Peak annotation GREAT ChIPseeker
9 months ago by MS ▴ 30
7
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7
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1.6k
views
6 follow
How to get output of annotated genes from ChIPseeker tool
ChIPseeker peakannotation
updated 10 months ago by ★ 1.8k • written 16 months ago by ▴ 30
0
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0
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309
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How to get vaf information column using annovartomaf
inferHeterogeneity vafCol maftools t_vaf annovartomaf
10 months ago by MS ▴ 30
0
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0
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3.4k
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Comment: Comment: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
12 months ago by MS ▴ 30
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2
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3.4k
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Comment: Comment: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
12 months ago by MS ▴ 30
0
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1
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3.4k
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Comment: Comment: ESTIMATE (Estimation of STromal and Immune cells in MAlignant Tumor tissues usin
12 months ago by MS ▴ 30
0
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1
reply
530
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Comment: Comment: how to determine genes expressed in NK cells using DE RNA-Seq data
13 months ago by MS ▴ 30
0
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0
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530
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Comment: Comment: how to determine genes expressed in NK cells using DE RNA-Seq data
13 months ago by MS ▴ 30
2
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5
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530
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how to determine genes expressed in NK cells using DE RNA-Seq data
ImmGen NKcellgenes
updated 13 months ago by 36k • written 13 months ago by ▴ 30
2
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13
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1.4k
views
pearson correlation between lncRNA and mRNA
pearson correlation R cor.test
updated 8 months ago by 36k • written 14 months ago by ▴ 30
0
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1
reply
1.4k
views
Comment: Comment: pearson correlation between lncRNA and mRNA
14 months ago by MS ▴ 30
0
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1
reply
1.4k
views
Comment: Comment: pearson correlation between lncRNA and mRNA
14 months ago by MS ▴ 30
0
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1
reply
1.4k
views
Comment: Comment: pearson correlation between lncRNA and mRNA
14 months ago by MS ▴ 30
0
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1
reply
1.4k
views
Comment: Comment: pearson correlation between lncRNA and mRNA
14 months ago by MS ▴ 30
0
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1
reply
1.6k
views
Comment: Comment: How to get output of annotated genes from ChIPseeker tool
16 months ago by MS ▴ 30
0
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1
reply
1.6k
views
Comment: Comment: How to get output of annotated genes from ChIPseeker tool
16 months ago by MS ▴ 30
0
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0
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574
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Best Tool for Tumor Cell Percentage Calculation (Paired NGS data)
next-gen snp SNP NGS
3.1 years ago by MS ▴ 30
0
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0
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4.5k
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Comment: A: Is there any way to convert ENST to HGNC symbol?
3.3 years ago by MS ▴ 30
0
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0
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3.8k
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Comment: C: GATK Panel Of Normals (PoN)
3.3 years ago by MS ▴ 30
0
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1
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3.8k
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Comment: A: GATK Panel Of Normals (PoN)
3.3 years ago by MS ▴ 30
0
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0
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1.1k
views
gatk AnalyzeCovariates The following object is masked from package stats
R AnalyzeCovariates stats gatk
3.5 years ago by MS ▴ 30
0
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1
reply
1.3k
views
Comment: C: defuse running error message
3.5 years ago by MS ▴ 30
0
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1
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1.3k
views
Comment: C: defuse running error message
3.5 years ago by MS ▴ 30
1
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5
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1.3k
views
defuse running error message
defuse software error
3.6 years ago by MS ▴ 30
3
votes
1
reply
6.5k
views
conda Solving environment: failed
defuse conda anaconda chimerascan
updated 3.6 years ago by 102k • written 3.6 years ago by ▴ 30
0
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0
replies
1.2k
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Comment: C: why FastQC tool K-mer content parameter is absent?
3.6 years ago by MS ▴ 30
0
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1
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1.2k
views
Comment: C: why FastQC tool K-mer content parameter is absent?
3.6 years ago by MS ▴ 30
2
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4
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1.2k
views
why FastQC tool K-mer content parameter is absent?
fastqc wts k-mer afterQC fastp
3.6 years ago by MS ▴ 30
0
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0
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833
views
Comment: C: Best tool for Chimeric Transcript Analysis?
3.6 years ago by MS ▴ 30
2
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2
replies
833
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Best tool for Chimeric Transcript Analysis?
RNA-Seq WTS Chimeric NGS fusion
updated 3.6 years ago by ▴ 990 • written 3.6 years ago by ▴ 30
0
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0
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6.8k
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Comment: C: AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for f
3.6 years ago by MS ▴ 30
0
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0
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747
views
Comment: C: AfterQC what is the reason killed
3.6 years ago by MS ▴ 30
0
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0
replies
747
views
Comment: C: AfterQC what is the reason killed
3.6 years ago by MS ▴ 30
0
votes
1
reply
747
views
Comment: C: AfterQC what is the reason killed
3.6 years ago by MS ▴ 30
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