Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
5.8k
views
Comment: Comment: fgsea tutorial issue with BiocParallel
5 months ago by cwwong13 ▴ 40
3
votes
5
replies
7.9k
views
normalization to "housekeeping" genes of RNAseq data vs qPCR result
qPCR RNAseq
updated 6 months ago by • 0 • written 4.1 years ago by ▴ 40
0
votes
2
replies
675
views
Reference Genome with decoy for RNAseq data processing
STAR SALMON RNAseq
updated 7 months ago by ★ 1.3k • written 7 months ago by ▴ 40
0
votes
0
replies
56k
views
Comment: Comment: Batch effects : ComBat or removebatcheffects (limma package) ?
17 months ago by cwwong13 ▴ 40
2
votes
2
replies
3.6k
views
Is MACS3 the same as MACS2?
MACS MACS3 MACS2
updated 20 months ago by 154k • written 20 months ago by ▴ 40
2
votes
2
replies
1.4k
views
Forum: Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
combat single-cell omics batch rnaseq
updated 21 months ago by 45k • written 21 months ago by ▴ 40
0
votes
1
reply
1.5k
views
Comment: Comment: Tests for the linear and non-linear relationship between two genes
21 months ago by cwwong13 ▴ 40
0
votes
0
replies
1.5k
views
Comment: Comment: Tests for the linear and non-linear relationship between two genes
21 months ago by cwwong13 ▴ 40
6
votes
5
replies
1.5k
views
Tests for the linear and non-linear relationship between two genes
ode drc correlation regression rnaseq
updated 21 months ago by 89k • written 21 months ago by ▴ 40
0
votes
0
replies
3.7k
views
Comment: Comment: Technical replicates in Microarray data
22 months ago by cwwong13 ▴ 40
0
votes
1
reply
821
views
Testing the interaction term in single-cell RNAseq DEG analysis
DEG scRNAseq Seurat
updated 23 months ago by 89k • written 23 months ago by ▴ 40
0
votes
0
replies
3.1k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
2.0 years ago by cwwong13 ▴ 40
0
votes
0
replies
3.1k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
2.0 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.1k
views
Comment: Comment: Highly inflated p-values in GWAS by regenie
2.0 years ago by cwwong13 ▴ 40
0
votes
8
replies
3.1k
views
6 follow
Highly inflated p-values in GWAS by regenie
regenie plink gwas
updated 4 months ago by 12k • written 2.0 years ago by ▴ 40
0
votes
1
reply
1.6k
views
Comment: Comment: Keplen Meyer Curve Dropping to zero
2.2 years ago by cwwong13 ▴ 40
0
votes
0
replies
1.7k
views
Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
2.2 years ago by cwwong13 ▴ 40
0
votes
2
replies
1.7k
views
Comment: Comment: Should we assume UMI-based scRNAseq data is not compositional?
2.2 years ago by cwwong13 ▴ 40
2
votes
7
replies
1.7k
views
Should we assume UMI-based scRNAseq data is not compositional?
compositional scRNAseq
2.2 years ago by cwwong13 ▴ 40
0
votes
1
reply
999
views
Is it proper to compare two WGCNA matrixes if they were raised to different power (soft threshold)?
WGCNA r RNA-seq cluster
updated 2.2 years ago by 45k • written 2.2 years ago by ▴ 40
0
votes
0
replies
1.3k
views
Comment: Comment: Summarizing permutation test/ bootstrap result for multiple samples for single-
2.5 years ago by cwwong13 ▴ 40
0
votes
0
replies
1.3k
views
Comment: Comment: Summarizing permutation test/ bootstrap result for multiple samples for single-
2.5 years ago by cwwong13 ▴ 40
0
votes
3
replies
1.3k
views
Summarizing permutation test/ bootstrap result for multiple samples for single-cell RNAseq data
single-cell RNA-seq
2.5 years ago by cwwong13 ▴ 40
0
votes
1
reply
833
views
overlay ggplot graphs like those merging channels in imagej
ggplot imagej
updated 2.6 years ago by 5.1k • written 2.6 years ago by ▴ 40
1
vote
0
replies
933
views
What are the differences between GSVA and ssGSEA (in layman's term)?
ssGSEA GSVA GSEA
2.6 years ago by cwwong13 ▴ 40
0
votes
0
replies
2.0k
views
Comment: Comment: Do I need to adjust the pvalue if I am only going to test one gene from omics da
2.6 years ago by cwwong13 ▴ 40
0
votes
0
replies
2.0k
views
Comment: Comment: Do I need to adjust the pvalue if I am only going to test one gene from omics da
2.6 years ago by cwwong13 ▴ 40
4
votes
4
replies
2.0k
views
Do I need to adjust the pvalue if I am only going to test one gene from omics data containing many genes?
pvalue Omics RNAseq
2.6 years ago by cwwong13 ▴ 40
2
votes
2
replies
1.2k
views
List of genes that are uniquely found in human (not in mouse)
orthologue genome gene
updated 2.8 years ago by 45k • written 2.8 years ago by ▴ 40
0
votes
1
reply
11k
views
Comment: Comment: map cDNA position on genomic position
2.9 years ago by cwwong13 ▴ 40
0
votes
1
reply
1.1k
views
Is it possible to infer whether a patient is with homozygous with the alternative alleles (at two different location)
association WES variant genome
updated 3.3 years ago by ★ 3.0k • written 4.2 years ago by ▴ 40
0
votes
0
replies
1.9k
views
Comment: Comment: Determine sex/ gender of a mouse cell line via sequencing data
3.4 years ago by cwwong13 ▴ 40
2
votes
3
replies
1.9k
views
Determine sex/ gender of a mouse cell line via sequencing data
sequencing line cell
updated 3.3 years ago by ▴ 140 • written 3.4 years ago by ▴ 40
0
votes
0
replies
3.2k
views
Comment: Comment: The modules are not clustered together after WGCNA
3.4 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.2k
views
Comment: Comment: The modules are not clustered together after WGCNA
3.4 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.2k
views
Comment: Comment: The modules are not clustered together after WGCNA
3.4 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.2k
views
Comment: Comment: The modules are not clustered together after WGCNA
3.4 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.2k
views
Comment: Comment: The modules are not clustered together after WGCNA
3.4 years ago by cwwong13 ▴ 40
1
vote
10
replies
3.2k
views
The modules are not clustered together after WGCNA
cluster WGCNA r dendrograms
3.4 years ago by cwwong13 ▴ 40
2
votes
1
reply
1.0k
views
Ways or packages to analyze single-cell RNAseq data that prepared following Tang's protocol
cell RNAseq seurat single
updated 3.5 years ago by 89k • written 3.5 years ago by ▴ 40
0
votes
1
reply
1.4k
views
Comment: Comment: What is the current recommended way to process/ analyze Ion Torrent Proton RNAse
3.6 years ago by cwwong13 ▴ 40
1
vote
3
replies
1.4k
views
What is the current recommended way to process/ analyze Ion Torrent Proton RNAseq data
RNAseq Proton Ion analysis Torrent pipeline processing
updated 3.6 years ago by 103k • written 3.6 years ago by ▴ 40
0
votes
3
replies
1.4k
views
COVID-19 WGS sequencing for individuals having mRNA vaccination
mRNA COVID vaccine WGS
updated 3.8 years ago by 11k • written 3.8 years ago by ▴ 40
0
votes
0
replies
799
views
Molecular docking considerations
binding affinity vina biology docking structural ligand
3.9 years ago by cwwong13 ▴ 40
0
votes
1
reply
3.3k
views
Comment: Comment: Proper way(s) to perform enrichment analysis in R
4.0 years ago by cwwong13 ▴ 40
4
votes
4
replies
3.3k
views
Proper way(s) to perform enrichment analysis in R
GSEA analysis enrichment R RNAseq
updated 4.0 years ago by ▴ 90 • written 4.0 years ago by ▴ 40
0
votes
1
reply
7.9k
views
Comment: Comment: normalization to "housekeeping" genes of RNAseq data vs qPCR result
4.1 years ago by cwwong13 ▴ 40
0
votes
1
reply
1.5k
views
Comment: Comment: Assessing how similar/ different of activated pathways between multiple groups o
4.1 years ago by cwwong13 ▴ 40
0
votes
3
replies
1.5k
views
Assessing how similar/ different of activated pathways between multiple groups of samples
pathway correlation test hypothesis
updated 4.1 years ago by 4.8k • written 4.1 years ago by ▴ 40
0
votes
0
replies
598
views
assessing relative contribution of samples/ organs towards a diseases in multi-tissue RNAseq
RNAseq
4.1 years ago by cwwong13 ▴ 40
76 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6