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14
votes
9
replies
6.5k
views
the analysis of multiple samples of 10X scRNA-seq
scRNAseq scRNA-seq
updated 4.4 years ago by 89k • written 5.9 years ago by ★ 1.4k
0
votes
0
replies
8.4k
views
Comment: C: about batch correction in scRNA-seq
6.0 years ago by Bogdan ★ 1.4k
13
votes
10
replies
4.6k
views
8 follow
single cell RNA-seq pipeline
scRNA-seq
updated 6.0 years ago by ▴ 350 • written 7.2 years ago by ★ 1.4k
0
votes
0
replies
4.6k
views
Comment: C: single cell RNA-seq pipeline
6.1 years ago by Bogdan ★ 1.4k
0
votes
1
reply
4.6k
views
Comment: C: single cell RNA-seq pipeline
6.1 years ago by Bogdan ★ 1.4k
0
votes
0
replies
2.6k
views
Comment: C: analysis of multiple batches and multiple treatment conditions in scRNA-seq
6.1 years ago by Bogdan ★ 1.4k
3
votes
2
replies
2.6k
views
analysis of multiple batches and multiple treatment conditions in scRNA-seq
scRNA-seq limma edgeR DEseq2 combat
updated 6.1 years ago by ▴ 30 • written 6.1 years ago by ★ 1.4k
12
votes
5
replies
9.8k
views
about the use of CellRanger aggr
cellranger scRNA-seq
6.1 years ago by Bogdan ★ 1.4k
0
votes
0
replies
9.8k
views
Comment: A: about the use of CellRanger aggr
6.1 years ago by Bogdan ★ 1.4k
0
votes
0
replies
9.8k
views
Comment: A: about the use of CellRanger aggr
6.1 years ago by Bogdan ★ 1.4k
1
vote
0
replies
9.8k
views
Comment: C: about the use of CellRanger aggr
6.1 years ago by Bogdan ★ 1.4k
3
votes
2
replies
1.1k
views
about GWAS studies and causal variants
GWAS SNP
updated 6.3 years ago by 48k • written 6.3 years ago by ★ 1.4k
6
votes
0
replies
7.6k
views
Answer: A: Single Cell RNA Seq. Analysis
6.4 years ago by Bogdan ★ 1.4k
18
votes
6
replies
23k
views
TPM values of expressed genes
RNA-Seq
updated 6.5 years ago by 22k • written 6.5 years ago by ★ 1.4k
0
votes
0
replies
23k
views
Comment: A: TPM values of expressed genes
6.5 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.9k
views
Answer: A: a webserver for the bigwig files
6.6 years ago by Bogdan ★ 1.4k
2
votes
6
replies
4.9k
views
a webserver for the bigwig files
bigwig
6.6 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.9k
views
Comment: C: a webserver for the bigwig files
6.6 years ago by Bogdan ★ 1.4k
0
votes
1
reply
4.9k
views
Comment: C: a webserver for the bigwig files
6.6 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.1k
views
Comment: C: gene counts in Seurat after RunCCA() and AlignSubspace()
6.7 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.1k
views
Comment: C: gene counts in Seurat after RunCCA() and AlignSubspace()
6.7 years ago by Bogdan ★ 1.4k
0
votes
1
reply
4.1k
views
Comment: C: gene counts in Seurat after RunCCA() and AlignSubspace()
6.7 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.1k
views
Answer: A: gene counts in Seurat after RunCCA() and AlignSubspace()
6.7 years ago by Bogdan ★ 1.4k
1
vote
8
replies
4.1k
views
gene counts in Seurat after RunCCA() and AlignSubspace()
seurat scRNA-seq CCA
6.7 years ago by Bogdan ★ 1.4k
0
votes
0
replies
4.1k
views
Comment: A: gene counts in Seurat after RunCCA() and AlignSubspace()
6.7 years ago by Bogdan ★ 1.4k
9
votes
4
replies
2.2k
views
counting the sequencing reads in 10kb regions on a genome-wide scale
genome sequencing CNV
updated 6.7 years ago by 20 • written 7.5 years ago by ★ 1.4k
0
votes
1
reply
1.4k
views
scRNA-seq: a question about the names of the columns in a Seurat object
scRNA-seq
6.8 years ago by Bogdan ★ 1.4k
0
votes
0
replies
1.4k
views
Answer: A: scRNA-seq: a question about the names of the columns in a Seurat object
6.8 years ago by Bogdan ★ 1.4k
0
votes
0
replies
15k
views
Comment: C: annotation of SV (structural variants)
6.8 years ago by Bogdan ★ 1.4k
0
votes
1
reply
12k
views
Comment: C: scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
6.8 years ago by Bogdan ★ 1.4k
16
votes
8
replies
12k
views
scRNA-seq, SEURAT, NormalizeData, ScaleData, PCA, CCA ...
scRNA-seq
6.8 years ago by Bogdan ★ 1.4k
0
votes
1
reply
1.8k
views
Comment: C: normalization of ChIP-seq data
6.9 years ago by Bogdan ★ 1.4k
0
votes
3
replies
1.8k
views
normalization of ChIP-seq data
ChIP-Seq normalization
updated 6.9 years ago by 105k • written 6.9 years ago by ★ 1.4k
0
votes
0
replies
6.0k
views
Answer: A: filtering the somatic variants
6.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
6.0k
views
Answer: A: filtering the somatic variants
6.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
6.0k
views
Answer: A: filtering the somatic variants
6.9 years ago by Bogdan ★ 1.4k
0
votes
0
replies
6.0k
views
Comment: C: filtering the somatic variants
6.9 years ago by Bogdan ★ 1.4k
4
votes
7
replies
4.8k
views
Gene set enrichment analysis
GSA GSEA enrichment R
updated 6.9 years ago by 12k • written 6.9 years ago by ★ 1.4k
0
votes
0
replies
4.8k
views
Comment: C: gene set enrichment analysis
6.9 years ago by Bogdan ★ 1.4k
0
votes
1
reply
4.8k
views
Comment: C: gene set enrichment analysis
6.9 years ago by Bogdan ★ 1.4k
0
votes
1
reply
4.8k
views
Comment: C: gene set enrichment analysis
updated 6.9 years ago by 45k • written 6.9 years ago by ★ 1.4k
0
votes
1
reply
1.6k
views
visualization of chromatin interaction networks
networks chromosome interactions R
updated 7.0 years ago by 12k • written 7.2 years ago by ★ 1.4k
1
vote
0
replies
2.8k
views
Comment: C: clonal populations in cancer samples
7.0 years ago by Bogdan ★ 1.4k
0
votes
1
reply
2.8k
views
Comment: C: clonal populations in cancer samples
7.0 years ago by Bogdan ★ 1.4k
14
votes
7
replies
2.8k
views
clonal populations in cancer samples
snp cnv cancer whole genome sequencing clone
updated 7.0 years ago by 15k • written 7.0 years ago by ★ 1.4k
1
vote
0
replies
2.8k
views
Comment: C: clonal populations in cancer samples
7.0 years ago by Bogdan ★ 1.4k
0
votes
1
reply
1.6k
views
computing the CNA in the cancer genomes
CNV cancer CNA copy number
updated 7.0 years ago by 89k • written 7.0 years ago by ★ 1.4k
0
votes
1
reply
1.0k
views
the closest gene to a breakpoint
bedtools R
updated 7.1 years ago by 35k • written 7.1 years ago by ★ 1.4k
5
votes
0
replies
1.1k
views
News: sharing BiocWorkshops 2018
limma edgeR DESeq2 RNA-seq glimma
updated 2.3 years ago by 45k • written 7.1 years ago by ★ 1.4k
2
votes
3
replies
2.8k
views
visualization of the translocations on the vertical scale
genome SV CNV SNV circos
7.1 years ago by Bogdan ★ 1.4k
388 results • Page 4 of 8
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