Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
0
votes
0
replies
1.2k
views
Comment: C: Is it still recommended to avoid macOS Big Sur?
2.8 years ago by jrleary ▴ 200
7
votes
3
replies
1.2k
views
Forum: Is it still recommended to avoid macOS Big Sur?
mac
updated 4 months ago by 40k • written 2.8 years ago by ▴ 200
0
votes
6
replies
874
views
Estimating hetero/homogeneity of scRNAseq clusters
scRNA-seq R
updated 3.1 years ago by 20 • written 3.3 years ago by ▴ 200
0
votes
1
reply
874
views
Comment: C: Estimating hetero/homogeneity of scRNAseq clusters
3.3 years ago by jrleary ▴ 200
0
votes
1
reply
874
views
Comment: C: Estimating hetero/homogeneity of scRNAseq clusters
3.3 years ago by jrleary ▴ 200
3
votes
2
replies
2.6k
views
What are the differences between the Seurat v3 clustering algorithms?
scRNA-seq Seurat R
3.3 years ago by jrleary ▴ 200
1
vote
0
replies
2.1k
views
Comment: C: Cell type pathway ScRNAseq
3.3 years ago by jrleary ▴ 200
0
votes
1
reply
1.0k
views
Comment: C: How to get same reproducible value in R?
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.6k
views
Comment: C: Using R Studio on Cloud
3.3 years ago by jrleary ▴ 200
0
votes
1
reply
1.0k
views
Answer: A: How to get same reproducible value in R?
3.3 years ago by jrleary ▴ 200
4
votes
0
replies
4.9k
views
Comment: C: Can I manually add nCount_RNA & nFeature_RNA to a converted Seurat object?
3.3 years ago by jrleary ▴ 200
4
votes
1
reply
4.9k
views
Can I manually add nCount_RNA & nFeature_RNA to a converted Seurat object?
scRNA-seq Seurat R
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.6k
views
Comment: C: How should I extract mutated genes from a VCF file?
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.6k
views
Comment: C: How should I extract mutated genes from a VCF file?
3.3 years ago by jrleary ▴ 200
0
votes
4
replies
1.6k
views
How should I extract mutated genes from a VCF file?
WES exome gatk
3.3 years ago by jrleary ▴ 200
2
votes
3
replies
2.6k
views
How much RAM / how many CPUs should I allocate for Mutect2?
WES
updated 3.3 years ago by ★ 3.3k • written 3.3 years ago by ▴ 200
0
votes
0
replies
2.6k
views
Comment: C: How much RAM / how many CPUs should I allocate for Mutect2?
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.7k
views
Comment: C: Picard CollectSequencingArtifactMetrics error
3.3 years ago by jrleary ▴ 200
0
votes
1
reply
1.7k
views
Comment: C: Picard CollectSequencingArtifactMetrics error
3.3 years ago by jrleary ▴ 200
0
votes
2
replies
1.7k
views
Comment: C: Picard CollectSequencingArtifactMetrics error
3.3 years ago by jrleary ▴ 200
0
votes
1
reply
1.7k
views
Comment: C: Picard CollectSequencingArtifactMetrics error
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.7k
views
Comment: C: Picard CollectSequencingArtifactMetrics error
3.3 years ago by jrleary ▴ 200
2
votes
11
replies
1.7k
views
Picard CollectSequencingArtifactMetrics error
picard WES
3.3 years ago by jrleary ▴ 200
0
votes
0
replies
1.4k
views
Comment: C: Coloring single cell dimension-reduced plots in R, which palettes can handle hig
3.4 years ago by jrleary ▴ 200
3
votes
2
replies
1.4k
views
Coloring single cell dimension-reduced plots in R, which palettes can handle high n?
R ggplot2
3.4 years ago by jrleary ▴ 200
0
votes
0
replies
627
views
Comment: C: Where to find reference transcriptome for firefly?
3.4 years ago by jrleary ▴ 200
1
vote
2
replies
627
views
Where to find reference transcriptome for firefly?
scRNA-seq cellranger alignment transcriptome
updated 3.4 years ago by 134k • written 3.4 years ago by ▴ 200
3
votes
3
replies
1.1k
views
Salmon only processes human reads from PDX data
salmon RNA-Seq alignment software error
updated 3.4 years ago by ▴ 50 • written 3.7 years ago by ▴ 200
0
votes
0
replies
1.7k
views
Comment: C: Papers on Paired Single Cell and Bulk RNAseq
3.5 years ago by jrleary ▴ 200
2
votes
3
replies
1.7k
views
Papers on Paired Single Cell and Bulk RNAseq
RNA-Seq scRNA-seq
updated 3.5 years ago by ▴ 10 • written 3.5 years ago by ▴ 200
2
votes
0
replies
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
0
votes
1
reply
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
0
votes
1
reply
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
0
votes
0
replies
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
0
votes
2
replies
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
2
votes
0
replies
4.8k
views
Answer: A: Marker genes for different cell types
3.6 years ago by jrleary ▴ 200
0
votes
1
reply
2.9k
views
Comment: C: Identifying tumor cells in single cell RNAseq data
3.6 years ago by jrleary ▴ 200
12
votes
14
replies
2.9k
views
Identifying tumor cells in single cell RNAseq data
cancer scRNAseq R
updated 3.6 years ago by ★ 15k • written 3.6 years ago by ▴ 200
0
votes
0
replies
2.0k
views
Comment: C: Recommendations for Whole Genome Sequencing Workflow
3.6 years ago by jrleary ▴ 200
0
votes
1
reply
2.0k
views
Comment: C: Recommendations for Whole Genome Sequencing Workflow
3.6 years ago by jrleary ▴ 200
11
votes
9
replies
2.0k
views
Recommendations for Whole Genome Sequencing Workflow
WGS genome Assembly
updated 3.6 years ago by ▴ 950 • written 3.6 years ago by ▴ 200
3
votes
2
replies
2.5k
views
Any recommendations for copy number variation (CNV) packages for scRNA-seq?
single cell scRNAseq CNV R
updated 3.6 years ago by ★ 15k • written 3.6 years ago by ▴ 200
1
vote
0
replies
1.1k
views
Comment: C: Salmon only processes human reads from PDX data
3.7 years ago by jrleary ▴ 200
0
votes
1
reply
689
views
Should cells be rows or columns when dimension reducing scRNAseq data?
scRNAseq single cell analysis
3.7 years ago by jrleary ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Is it appropriate to use counts = counts + 1 when using DESeq2 on scRNAseq data?
3.8 years ago by jrleary ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Is it appropriate to use counts = counts + 1 when using DESeq2 on scRNAseq data?
3.8 years ago by jrleary ▴ 200
3
votes
9
replies
3.0k
views
Is it appropriate to use counts = counts + 1 when using DESeq2 on scRNAseq data?
sc-rnaseq differential expression
updated 3.8 years ago by 13k • written 3.8 years ago by ▴ 200
0
votes
1
reply
3.0k
views
Comment: C: Is it appropriate to use counts = counts + 1 when using DESeq2 on scRNAseq data?
3.8 years ago by jrleary ▴ 200
0
votes
0
replies
6.2k
views
Comment: C: Should I Run Clustering on PCA or t-SNE Components?
3.8 years ago by jrleary ▴ 200
9
votes
8
replies
6.2k
views
Should I Run Clustering on PCA or t-SNE Components?
sc-rnaseq clustering
updated 3.8 years ago by ★ 25k • written 3.8 years ago by ▴ 200
63 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6