updated 4 days ago by
Jack Tierney
▴
360
•
written 4 days ago by
Sudip
•
0
0
votes
1
reply
184
views
1
vote
1
reply
225
views
updated 4 days ago by
Michael
54k
•
written 4 days ago by
Lissa Cruz Saavedra
•
0
5
votes
3
replies
274
views
6 follow
updated 4 days ago by
Lluís R.
★
1.2k
•
written 4 days ago by
이민경[학생](대학원 융합의과학과)
•
0
2
votes
2
replies
195
views
1
vote
2
replies
225
views
0
votes
0
replies
112
views
0
votes
0
replies
113
views
0
votes
0
replies
132
views
4 days ago by
Jacob
•
0
0
votes
3
replies
742
views
0
votes
4
replies
269
views
0
votes
1
reply
181
views
0
votes
3
replies
282
views
3
votes
2
replies
377
views
3
votes
3
replies
323
views
0
votes
1
reply
168
views
updated 5 days ago by
Ram
43k
•
written 5 days ago by
Petchimuthu
•
0
3
votes
7
replies
342
views
0
votes
0
replies
123
views
5 days ago by
Lluís R.
★
1.2k
4
votes
7
replies
584
views
5 days ago by
e.r.zakiev
▴
210
0
votes
0
replies
124
views
0
votes
4
replies
258
views
0
votes
5
replies
418
views
0
votes
0
replies
226
views
0
votes
3
replies
216
views
0
votes
0
replies
93
views
0
votes
2
replies
224
views
5 days ago by
Bosberg
▴
50
4
votes
0
replies
133
views
1
vote
1
reply
144
views
0
votes
1
reply
274
views
0
votes
0
replies
89
views
1
vote
4
replies
395
views
5 days ago by
hagl
▴
10
0
votes
5
replies
293
views
updated 1 day ago by
Mohamed Abderrahmane
▴
20
•
written 5 days ago by
matteo.levorato
•
0
0
votes
2
replies
158
views
0
votes
1
reply
145
views
0
votes
0
replies
99
views
7
votes
16
replies
724
views
5 days ago by
Ruqaiya
•
0
0
votes
2
replies
203
views
38
votes
24
replies
1.9k
views
10 follow
0
votes
0
replies
370
views
0
votes
0
replies
97
views
updated 5 days ago by
GenoMax
142k
•
written 5 days ago by
aliraza3119
•
0
0
votes
1
reply
137
views
2
votes
7
replies
1.3k
views
6 follow
updated 5 days ago by
Gordon Smyth
★
7.1k
•
written 8 months ago by
Calum
▴
10
0
votes
1
reply
211
views
updated 5 days ago by
christopher medway
▴
460
•
written 5 days ago by
Tigran
•
0
2
votes
2
replies
204
views
0
votes
0
replies
114
views
5 days ago by
carlopecoraro2
★
2.5k
0
votes
8
replies
436
views
0
votes
9
replies
2.5k
views
6 follow
2
votes
5
replies
466
views
6 days ago by
ashaneev07
▴
20
0
votes
1
reply
169
views
0
votes
1
reply
750
views
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
Russia, 3 minutes ago
India, 3 minutes ago
United States, 4 minutes ago
United States, 8 minutes ago
Pakistan, 9 minutes ago
Spain, 11 minutes ago
Recent Awards •
All
Commentator to
dsull
★
6.0k
Scholar to
BioinfGuru
★
1.7k
Popular Question to
drajangirija
•
0
Popular Question to
Thanujay S
•
0
Popular Question to
SHN
▴
40
Popular Question to
Rob
▴
170
Recent Replies
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴
10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
•
0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★
27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
•
0
Hey @Ruqaiya!
Can you please give more details on why smalt is opted here?
According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA
by
Thanujay S
•
0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool
by
Ruqaiya
•
0
I tried the 2nd option only.
I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Comment: filtering before dada2
by
GenoMax
142k
> I encountered a significant decrease in the percentage of merged reads.
You can check with `bbmerge.sh` from BBMap suite to see how many…
Comment: HCL database download
by
GenoMax
142k
Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
Comment: fastq screen aligner no specified.
by
GenoMax
142k
You need to change this configuration file to point it to the location where the aligner executable can be found.
So as an example followi…
Answer: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
The expression levels do not change but the way that you have parametrized the expression levels does change.
The two design matrices give…
Traffic: 1518 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6