updated 2 hours ago by
Pierre Lindenbaum
161k
•
written 3 hours ago by
ajbarrett98
•
0
0
votes
1
reply
49
views
0
votes
10
replies
267
views
1
vote
3
replies
87
views
3
votes
3
replies
96
views
0
votes
1
reply
67
views
updated 5 hours ago by
Ram
43k
•
written 5 hours ago by
rackbersingh
•
0
0
votes
1
reply
78
views
0
votes
0
replies
50
views
8 hours ago by
beantkapoor16
•
0
0
votes
0
replies
56
views
updated 5 hours ago by
Ram
43k
•
written 11 hours ago by
naomiboldon
•
0
1
vote
3
replies
151
views
updated 5 hours ago by
Ram
43k
•
written 12 hours ago by
Omics data mining
▴
260
1
vote
7
replies
467
views
updated 14 hours ago by
Pierre Lindenbaum
161k
•
written 3 days ago by
schmince
•
0
0
votes
5
replies
176
views
10 hours ago by
SilhouetteQ
•
0
0
votes
1
reply
75
views
updated 14 hours ago by
GenoMax
142k
•
written 14 hours ago by
maria.soler
•
0
0
votes
1
reply
96
views
updated 5 hours ago by
Ram
43k
•
written 15 hours ago by
carolofharvest
▴
40
0
votes
1
reply
103
views
2
votes
12
replies
2.7k
views
6 follow
updated 2 days ago by
Anitha
•
0
•
written 4.8 years ago by
ww22runner
▴
60
0
votes
0
replies
66
views
0
votes
1
reply
98
views
0
votes
0
replies
62
views
updated 17 hours ago by
zx8754
11k
•
written 19 hours ago by
Lambodarswain316
•
0
0
votes
1
reply
108
views
0
votes
0
replies
60
views
0
votes
1
reply
121
views
0
votes
2
replies
116
views
0
votes
0
replies
62
views
21 hours ago by
jain72744
▴
10
6
votes
2
replies
126
views
updated 21 hours ago by
Gordon Smyth
★
7.1k
•
written 23 hours ago by
gBioStar5
▴
10
2
votes
5
replies
282
views
3
votes
1
reply
103
views
0
votes
0
replies
71
views
0
votes
0
replies
80
views
0
votes
0
replies
76
views
1 day ago by
RT
▴
10
0
votes
0
replies
81
views
2
votes
0
replies
80
views
1 day ago by
carlopecoraro2
★
2.5k
0
votes
8
replies
324
views
1 day ago by
marco.barr
▴
100
0
votes
1
reply
295
views
0
votes
2
replies
151
views
updated 5 hours ago by
Ram
43k
•
written 1 day ago by
sainavyav22
•
0
3
votes
4
replies
217
views
0
votes
0
replies
90
views
0
votes
3
replies
495
views
0
votes
3
replies
174
views
0
votes
3
replies
226
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 2 days ago by
Matthew
•
0
0
votes
1
reply
112
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
Lambodarswain316
•
0
1
vote
2
replies
190
views
1
vote
1
reply
418
views
4
votes
3
replies
2.8k
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
Lila M
★
1.2k
2
votes
3
replies
184
views
updated 1 day ago by
Pierre Lindenbaum
161k
•
written 1 day ago by
ScottDansk
▴
10
1
vote
0
replies
115
views
0
votes
1
reply
168
views
updated 1 day ago by
marco.barr
▴
100
•
written 2 days ago by
odi
▴
10
0
votes
6
replies
2.1k
views
1
vote
1
reply
133
views
1
vote
2
replies
1.6k
views
0
votes
0
replies
106
views
updated 1 day ago by
Ram
43k
•
written 1 day ago by
curious_butterfly
•
0
Recent Votes
Recent Locations •
All
Russia, 1 minute ago
United States, 7 minutes ago
Brazil, 12 minutes ago
South Korea, 26 minutes ago
Russia, 55 minutes ago
Republic of Ireland, 55 minutes ago
Russia, 57 minutes ago
Recent Awards •
All
Popular Question to
turcoa1
•
0
Scholar to
chrchang523
10k
Popular Question to
Lélé
•
0
Commentator to
dthorbur
★
1.9k
Popular Question to
maria.soler
•
0
Popular Question to
melissachua90
▴
70
Popular Question to
Lila M
★
1.2k
Recent Replies
Answer: Is it Possible to "Merge" data from Replicates within a VCF SNP File
by
Pierre Lindenbaum
161k
use bcftools merge with --force-samples and then use jvarkit https://jvarkit.readthedocs.io/en/latest/VcfFilterJdk/ to replace the no-call …
Answer: In IGV is this a heterogeneous mutation or false call?
by
swbarnes2
14k
Since all the reads that show the alternate allele have to be clipped to align there, I'd say those reads are misaligned. I would say that…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
> Here's a few lines from the head of the raw fastq
If your files are actually compressed (as their names suggest) then you should not be …
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
GenoMax
142k
If you added the `\` before the `+` then there is no need for it. It makes it appear that the sequences are not in proper fastq format. Ple…
Comment: Tassel 5 GBS: Is there something wrong with my fastqs?
by
Mensur Dlakic
★
27k
This seems to be the same unanswered question as before, except that its description is split over two threads. You are now forcing us to r…
Answer: what is another word for a BLAST "hit"?
by
dec986
▴
380
I'll probably go with "matches" even though it doesn't sound as good as just "hit"
Comment: what is another word for a BLAST "hit"?
by
Pierre Lindenbaum
161k
> is there a synonym for hits from BLAST?
alignment
Comment: How are score_weights calculated in this code?
by
Ram
43k
Is this ALL the context you can give us?
Comment: Genome Assembly task + Protein Translation, assignment advice on a question
by
Ram
43k
Where did you copy-paste this from? It looks like an assignment question.
Comment: Contig assembly task, errors
by
rackbersingh
•
0
Hi Phillip,
Thanks for sharing you knowledge and funnily enough this really was an amplitude test, but anyways your sharing of knowledge h…
Comment: Can I readmap short reads to rDNA references?
by
GenoMax
142k
If these are short reads and the organisms are related then you are going to have a difficult time classifying the reads.
Comment: extract viral protein of interest from 10k whole viral genomes
by
GenoMax
142k
With a large dataset it is always best to do the search locally (or in the cloud, if you don't have necessary hardware available locally).
Comment: Truncated metadata file report from ENA Portal API
by
Giulia
•
0
Thank you so much for your hint! I'll look into this!
Comment: How to convert Haps file to vcf file?
by
curious
▴
750
unzip haps then:
bin/shapeit \
-convert \
--input-haps {haps_prefix} \
--thread {cpus} \
--output-…
Traffic: 1437 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6