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1,000 results • Page
5 of 20
Sort: Rank
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Views
Votes
Replies
2
votes
5
replies
391
views
Figures are disappeared from html report of SnpEff
HTML
SnpEff
6 days ago by
analyst
▴ 30
0
votes
3
replies
325
views
Highest variable features in single cell data
single-cell
updated 8 days ago by
bk11
★ 2.4k • written 10 days ago by
carolofharvest
▴ 30
0
votes
1
reply
230
views
Network Alignment
plugin
Cytoscape
CytoMCS
updated 10 days ago by
Scooter
▴ 280 • written 11 days ago by
Akash D
▴ 40
2
votes
4
replies
2.4k
views
How could I generate a gi_taxid_nucl.dmp file similar to the one previously hosted by NCBI?
ncbi
metagenomics
centrifuge
gi_taxid_nucl.dmp
taxonomy
updated 10 days ago by
ZhangYuanfeng
• 0 • written 2.4 years ago by
Frazier Baker
• 0
1
vote
3
replies
395
views
PCA plot
DESeq2
PCAplot
updated 6 days ago by
LauferVA
4.2k • written 10 days ago by
Aaliya
▴ 10
5
votes
5
replies
569
views
Tutorial:
how to combine multiple RNAseq count files into a single dataframe in R and unix
Unix
RNAseq
R
updated 1 day ago by
Mbofire
• 0 • written 10 days ago by
Ming Tommy Tang
★ 3.9k
0
votes
4
replies
2.7k
views
Lositan freezing when generating selection table
LOSITAN
updated 10 days ago by
evawillms183
• 0 • written 8.3 years ago by
andrepleao
• 0
0
votes
0
replies
157
views
Can you give me an example of a small globular protein (PDB) that has disordered alpha-carbons?
protein
pdb
alpha-carbon
10 days ago by
4fzcgueyp5
• 0
2
votes
3
replies
354
views
clustalo - align milions of short seq, memory issue
memory
clustalo
updated 12 days ago by
Mensur Dlakic
★ 27k • written 13 days ago by
emmanouil.a
▴ 120
0
votes
2
replies
282
views
Annovar using R package
Annovar
gnomAD
R
9 days ago by
DKA
▴ 40
0
votes
2
replies
252
views
Creating Synthetic Sequences for a ML Model
DNA
ML
updated 10 days ago by
Mensur Dlakic
★ 27k • written 10 days ago by
biochugs
• 0
8
votes
8
replies
677
views
PCA plot (Suggestions Needed)
DESeq2
PCAplot
updated 10 days ago by
swbarnes2
14k • written 11 days ago by
Aaliya
▴ 10
1
vote
8
replies
896
views
Adding CB tag to bam file
samtools
bam
updated 10 days ago by
Pierre Lindenbaum
161k • written 16 days ago by
Maria
• 0
1
vote
10
replies
992
views
Troubleshooting RNA-seq data with DNA contamination
RNA-seq
DESeq2
DNA-contamination
10 days ago by
DKA
▴ 40
0
votes
2
replies
829
views
AGeNT LocatIt
AGeNT
LocatIt
WES
UMI
duplicates
updated 10 days ago by
barslmn
★ 2.1k • written 2.8 years ago by
jhy
▴ 10
0
votes
5
replies
388
views
Is it possible to get a list of representative genomes from a past RefSeq release?
representative
ncbi
asembly
refseq
updated 10 days ago by
GenoMax
142k • written 10 days ago by
Bertalan_Takacs
▴ 90
0
votes
0
replies
152
views
One error problem occurred caused by data type during using GDCprepare to handle BRCA data
TCGA
GDCprepare
updated 10 days ago by
Ram
43k • written 10 days ago by
glaciya2018
• 0
0
votes
0
replies
313
views
roary not working with pgap output gff files with fasta sequence but works with prokka's gff outputs
pangenome
PGAP
NCBI
roary
Prokka
10 days ago by
pramach1
▴ 40
0
votes
13
replies
3.6k
views
6 follow
Tax4Fun2 - error
tax4fun
silva
blast
updated 11 days ago by
drstalinantony28
• 0 • written 2.2 years ago by
ymj
▴ 10
0
votes
1
reply
178
views
GEMMA GWAS how to specify factor or numerical for covariates
covariate
GEMMA
GWAS
updated 10 days ago by
Sofia
• 0 • written 11 days ago by
mawigoj318
• 0
0
votes
0
replies
152
views
Sequence BLAST in plus/minus and plus/plus
blast
CRISPR
strand
sequencing
11 days ago by
salias
• 0
4
votes
7
replies
518
views
To get p-values for the TPM
P-value
TPM
RSEM
updated 10 days ago by
dsull
★ 6.0k • written 11 days ago by
VITALA
• 0
0
votes
5
replies
386
views
different FeatureCounts output for the same data
fpkm
Counts
Rsubread
rna-seq
updated 7 days ago by
Istvan Albert
100k • written 11 days ago by
sehriban.buyukkilic
▴ 10
0
votes
0
replies
130
views
Alternative splicing analysis using SUPPA tool - how to normalise counts?
rna-seq
single-cell
suppa
alternative-splicing
updated 10 days ago by
Ram
43k • written 11 days ago by
newuser2024
• 0
1
vote
2
replies
257
views
alignment result
RNA-seq
samtools
hisat2
10 days ago by
ahmad.sajad4541
• 0
0
votes
0
replies
126
views
News:
hands-on introduction to generalized linear models (GLMs) using R
Generalized-Linear-Models
GLM
R
updated 10 days ago by
Ram
43k • written 11 days ago by
carlopecoraro2
★ 2.5k
0
votes
2
replies
242
views
Wilcox test using data slot (log normalized count values) of scRNA-seq between two groups
scRNAseq
11 days ago by
mropri
▴ 150
2
votes
2
replies
244
views
HaplotypeCaller - only SNPs
HaplotypeCaller
GATK
updated 11 days ago by
analyst
▴ 30 • written 11 days ago by
lorena9132
▴ 10
0
votes
0
replies
122
views
AttributeError: module 'scvelo' has no attribute 'pp
loomfile
scvelo
scipy
annData
numpy
11 days ago by
Kash
▴ 110
7
votes
2
replies
300
views
Gene set enrichment analysis differences between 2020 and 2024
Gene-ontology
updated 11 days ago by
geneontologyhelp
▴ 390 • written 12 days ago by
catherine.teyssier
• 0
1
vote
1
reply
231
views
Blasting two protein sequences vs two nucleotide sequences
gene-hunting
blast
updated 11 days ago by
Istvan Albert
100k • written 12 days ago by
Abeer
• 0
2
votes
4
replies
358
views
Should I use unpaired reads from trimmomatic
RNA-seq
QC
Trimmomatic
updated 11 days ago by
swbarnes2
14k • written 12 days ago by
dxj294
• 0
0
votes
1
reply
169
views
How to solve this RoseTTAFold colaboratory error?
modeling
Google
Colaboratory
RoseTTAFold
protein
updated 11 days ago by
Mensur Dlakic
★ 27k • written 11 days ago by
benguyarenbeyaz98
• 0
2
votes
2
replies
306
views
How to calculate identity percentage between proteins contained in a FASTA file?
protein
FASTA
alignment
updated 10 days ago by
Ram
43k • written 11 days ago by
v.berriosfarias
▴ 140
3
votes
1
reply
248
views
Seurat merge and batch correction
Seurat
updated 11 days ago by
Ram
43k • written 12 days ago by
sooni
▴ 20
1
vote
1
reply
226
views
Herald:
The Biostar Herald for Tuesday, April 23, 2024
herald
updated 11 days ago by
Pierre Lindenbaum
161k • written 11 days ago by
Biostar
2.7k
1
vote
1
reply
171
views
Including plasmid in alignment
Bacteria
Transcriptomics
BOWTIE2
STAR
4 days ago by
heelpPlease
• 0
2
votes
9
replies
896
views
TCGA2STAT Error: Firehose connection
FIREHOSE
TCGA
updated 11 days ago by
LauferVA
4.2k • written 6 months ago by
Gnana
• 0
0
votes
11
replies
624
views
How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq libraries?
STARSolo
scRNA-seq
STAR
snRNA-seq
MGI
9 days ago by
atowns21
• 0
0
votes
1
reply
187
views
Find subcluster under a cluster, find differential genes in one cluster between 2 samples??
clustering
subclustering
scRNAseq
updated 11 days ago by
bk11
★ 2.4k • written 11 days ago by
alphaflylizard
• 0
5
votes
4
replies
372
views
Forum:
Ideal PC configurations and operating system for bioinformatics laboratory
PC
2 days ago by
Estevão
• 0
0
votes
3
replies
290
views
Difference between samtools "-f 9" and "-f 11"
samtools
sam
bam
updated 11 days ago by
Istvan Albert
100k • written 11 days ago by
Dylan
• 0
2
votes
5
replies
358
views
How to trim transcripts using information from NCBI contamination screen report
RNAseq
assembly
transcriptome
contamination
9 days ago by
Lada
▴ 30
4
votes
11
replies
813
views
Redirection of Duplicate PMIDs
pubmed
pmid
updated 11 days ago by
LauferVA
4.2k • written 12 days ago by
dominickd
• 0
8
votes
16
replies
1.0k
views
How to convert plink files to Hapmap Format
GWAS
Plink
updated 8 days ago by
bk11
★ 2.4k • written 8 weeks ago by
Sofia
• 0
0
votes
0
replies
108
views
The concept of co-occurrence network structure
co-occurence
microbiome
network
11 days ago by
ohtang7
▴ 40
3
votes
0
replies
137
views
News:
Interested in Spatial Omics?
Bioconductor
Spatial-Omics
Spatial-Transcriptomics
updated 11 days ago by
Ram
43k • written 11 days ago by
carlopecoraro2
★ 2.5k
2
votes
2
replies
461
views
Using vg gamsort with naive sorting algorithm
gamsort
vg
updated 11 days ago by
Pierre Lindenbaum
161k • written 8 months ago by
AshleeThomson
▴ 80
0
votes
1
reply
185
views
Plot DNA methylation level of DMR on the basis of certain genes
rrbs
methylkit
updated 12 days ago by
GenoMax
142k • written 12 days ago by
Srinka
▴ 20
8
votes
5
replies
5.8k
views
ISCN annotation for SV/CN VCF files
SV
written 8 months ago by
a.beggs
▴ 60
1,000 results • Page
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Answer: GRCh38.gmap file
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