updated 4 days ago by
Ram
43k
•
written 5 days ago by
Jonathan Yoou
▴
60
1
vote
1
reply
232
views
1
vote
2
replies
286
views
1
vote
3
replies
280
views
0
votes
1
reply
180
views
updated 3 days ago by
Adam
▴
30
•
written 5 days ago by
Ahiad Chen Zion
•
0
0
votes
0
replies
129
views
0
votes
0
replies
126
views
updated 5 days ago by
Ram
43k
•
written 5 days ago by
Alexandros
•
0
0
votes
1
reply
171
views
0
votes
3
replies
280
views
0
votes
0
replies
133
views
1
vote
2
replies
228
views
0
votes
0
replies
114
views
0
votes
0
replies
115
views
0
votes
0
replies
133
views
5 days ago by
Jacob
•
0
0
votes
1
reply
182
views
0
votes
3
replies
289
views
3
votes
7
replies
344
views
0
votes
0
replies
125
views
6 days ago by
Lluís R.
★
1.2k
0
votes
0
replies
124
views
0
votes
4
replies
262
views
0
votes
0
replies
228
views
0
votes
3
replies
218
views
0
votes
0
replies
94
views
0
votes
2
replies
227
views
6 days ago by
Bosberg
▴
50
0
votes
0
replies
89
views
0
votes
2
replies
160
views
0
votes
0
replies
100
views
0
votes
2
replies
205
views
0
votes
0
replies
522
views
0
votes
0
replies
97
views
updated 6 days ago by
GenoMax
142k
•
written 6 days ago by
aliraza3119
•
0
0
votes
1
reply
138
views
0
votes
1
reply
213
views
updated 6 days ago by
christopher medway
▴
460
•
written 6 days ago by
Tigran
•
0
2
votes
2
replies
206
views
0
votes
9
replies
2.5k
views
6 follow
1
vote
2
replies
194
views
0
votes
0
replies
123
views
updated 6 days ago by
dariober
14k
•
written 7 days ago by
rene.j.erhardt
▴
20
1
vote
3
replies
306
views
1
vote
3
replies
395
views
1
vote
8
replies
476
views
4 days ago by
marco.barr
▴
90
0
votes
10
replies
524
views
1
vote
6
replies
335
views
0
votes
3
replies
339
views
2
votes
5
replies
930
views
0
votes
1
reply
542
views
updated 2 days ago by
clairechung112
•
0
•
written 2.2 years ago by
Bogdan
★
1.4k
4
votes
9
replies
2.1k
views
5 days ago by
anna
▴
20
2
votes
2
replies
1.8k
views
updated 1 day ago by
e.r.zakiev
▴
210
•
written 3.8 years ago by
n.anuragsharma
▴
40
1
vote
14
replies
2.3k
views
updated 2 days ago by
GenoMax
142k
•
written 4.5 years ago by
Swimming bird
▴
20
1
vote
6
replies
2.8k
views
updated 6 days ago by
dimpleadiwal050896
•
0
•
written 4.9 years ago by
ggman
▴
90
2
votes
2
replies
2.6k
views
Recent Votes
Recent Locations •
All
Russia, 2 minutes ago
Germany, 2 minutes ago
United Kingdom, 12 minutes ago
United States, 13 minutes ago
Norway, 15 minutes ago
Belgium, 16 minutes ago
Hong Kong, 20 minutes ago
Recent Awards •
All
Popular Question to
iamsmor
•
0
Popular Question to
carlopecoraro2
★
2.5k
Popular Question to
Sara
▴
30
Popular Question to
Assa Yeroslaviz
★
1.8k
Popular Question to
Yoosef
▴
60
Popular Question to
Zhenyu Zhang
★
1.2k
Popular Question to
psm
▴
130
Recent Replies
Answer: install package
by
Mathew
▴
40
Hi,
This is what happens when I run some code to diagnose the issue. First, I wanted to see what version of R was required for the package…
Answer: LD-prune variants while maintaining a list of SNPs
by
Jautis
▴
540
I was given a solution by a colleague -- it seems a little hacky, but worked really well!
> one way to get this to work is to use --clu…
Answer: Association study using SNP data
by
drajangirija
•
0
Hi Matthew, Thank you very much for your inputs. I am working with Neogen genotyping data, which includes GC values less than 0.15.
Comment: Downloading full alignments from Pfam
by
bef1
•
0
I tried contacting Pfam, they replied that indeed there is an issue on their side with the full alignments, which should be repaired in the…
Comment: Seeking Bioinformatics/Drug Design Opportunities - PhD in Pharmacology with Expe
by
Mensur Dlakic
★
27k
Don't know about others, but I would never contact someone about potential employment based only on their interests and with zero knowledge…
Comment: The GDC Legacy Archive is retiring soon.
by
Zhenyu Zhang
★
1.2k
If you are talking about methylation idat files, they were all migrated from legacy to the data portal.
If you are talking about other pl…
Comment: How to access TCGA samples that were treated with a specific drug?
by
Zhenyu Zhang
★
1.2k
These TCGA samples were taken 10 ~ 20 years ago, and there is no way they have been treated by the modern immunotherapy.
Are you sure tha…
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★
7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1))
It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴
10
Hi Mathew,
The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴
40
Hi,
I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴
40
Hi,
You asked three questions so I will attempt to help the best I can
**What should be the optimal GC score cutoff**
It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴
40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
•
0
I ran into same issue of "duplicated gene symbol(s)":
1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, :
22292 dup…
Traffic: 1496 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6