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Limit : this year
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1,000 results • Page
5 of 20
Sort: Rank
Rank
Views
Votes
Replies
0
votes
2
replies
268
views
RNA editing sites based on DNA seq and RNA seq
RNA-editing
13 days ago by
Ahiad Chen Zion
• 0
0
votes
0
replies
144
views
Somatic variant calling with Mutect2 using 2 matched-normals for one sample
cancer
mutect
variant-calling
GATK
somatic-variants
updated 20 days ago by
Ram
43k • written 20 days ago by
Alexandros
• 0
0
votes
1
reply
199
views
unable to get feature count results
featureCounts
updated 20 days ago by
Ram
43k • written 20 days ago by
Ravita
• 0
0
votes
3
replies
330
views
KEGG Pathways
r
RNA-seq
updated 20 days ago by
Ram
43k • written 20 days ago by
Sudip
• 0
0
votes
0
replies
159
views
Seurat object reductions (PCA, UMAP,..) after subsetting data
Seurat
20 days ago by
Bine
▴ 60
1
vote
2
replies
266
views
Need help for downloading arabdopsis thaliana reference genome fasta file and gtf file
Arabidopsis-thaliana
gtf
reference-genome
updated 20 days ago by
Ram
43k • written 21 days ago by
Ravita
• 0
3
votes
3
replies
299
views
Gene Specific coverage from WGS data
WGS
SARS-CoV2
updated 7 days ago by
Ram
43k • written 21 days ago by
Adyasha
• 0
0
votes
0
replies
129
views
human gut metagenome taxonomy profile table and KO profile table from big cohort
metagenome
gut
human
21 days ago by
fanglujing
▴ 60
0
votes
0
replies
151
views
Are some metagenomes too complex for MAGs?
metagenomics
metagenome
MAGs
assembly
21 days ago by
Jacob
• 0
0
votes
1
reply
209
views
Differential Accessibility
DiffBind
updated 21 days ago by
Ram
43k • written 21 days ago by
Shloka
• 0
0
votes
3
replies
333
views
Landmark gene selection in L1000.
L1000
landmark-gene
cmap
updated 20 days ago by
GenoMax
142k • written 21 days ago by
kim
• 0
3
votes
7
replies
428
views
FastQC Quality per tile and per sequence behaving strange after using Cutadapt
fastqc
cutadapt
illumina
tile
paired-end
21 days ago by
salias
• 0
0
votes
0
replies
146
views
Using limma in methylation EM-seq?
EM-seq
methylation
21 days ago by
Lluís R.
★ 1.2k
0
votes
0
replies
141
views
Synteny analysis
bacterial
synteny
genome
updated 21 days ago by
GenoMax
142k • written 21 days ago by
Namil
• 0
0
votes
4
replies
322
views
Genbank File Format
gbkformat
21 days ago by
alenew.am
• 0
0
votes
0
replies
281
views
Assist me in determining whether the analysis process using the limma package has been executed correctly
limma
ArrayExpress
DifferentialExpression
GEOquery
21 days ago by
SSSJec
• 0
0
votes
3
replies
267
views
Software to separate reads from different individuals
software
development
nanopore
updated 21 days ago by
GenoMax
142k • written 21 days ago by
njornet
▴ 20
0
votes
2
replies
388
views
How to update R on ubuntu
installation
update
R
apt-get
21 days ago by
Bosberg
▴ 50
0
votes
0
replies
130
views
LEfSe
LEfSe
21 days ago by
benkosta
• 0
0
votes
0
replies
109
views
How should I handle read counts derived from SGSeq when I want to build DEXSeqDataSet object
DEXSeq
DEXSeqDataSet
SGSeq
21 days ago by
Sara
▴ 30
0
votes
2
replies
207
views
Longitudinal analysis of subpopulations: which approach is better?
differential-expression
DEG
model
21 days ago by
Lluís R.
★ 1.2k
0
votes
0
replies
128
views
Comparing peptide sequences with MS/MS peptide data using MaxQuant
Transcriptomics
Mass-spectrometry
Proteins
updated 7 days ago by
Ram
43k • written 22 days ago by
atharvakarkare14
▴ 40
0
votes
2
replies
250
views
What should I consider as FASTA for dataset?
PDB
FASTA
21 days ago by
Nafi
• 0
0
votes
0
replies
612
views
Differential accessibility using DiffBinf
diffbind
22 days ago by
Shloka
• 0
0
votes
0
replies
120
views
vg call vs vg surject
vg
variation
graphs
updated 21 days ago by
GenoMax
142k • written 22 days ago by
aliraza3119
• 0
0
votes
1
reply
247
views
Finding batch and outlayers
Pca
updated 21 days ago by
christopher medway
▴ 460 • written 22 days ago by
Tigran
• 0
2
votes
2
replies
250
views
PDB related issue
rcsb
pdb
updated 22 days ago by
noodle
▴ 580 • written 22 days ago by
Nafi
• 0
0
votes
9
replies
2.6k
views
6 follow
Cannot process all the reads in a fast5 file?
metagenome
base-calling
fastq
nanopore
updated 22 days ago by
Ram
43k • written 9 months ago by
Gio
• 0
1
vote
2
replies
289
views
Downloading full alignments from Pfam
pfam
15 days ago by
bef1
• 0
0
votes
0
replies
142
views
adjusting for confounders in LMER in R
confounders
LMER
R
updated 21 days ago by
dariober
14k • written 23 days ago by
rene.j.erhardt
▴ 20
1
vote
3
replies
385
views
How to assign cell types after integration in scRNA
scRNA-seq
updated 22 days ago by
ATpoint
82k • written 23 days ago by
Francesco
▴ 10
0
votes
0
replies
159
views
STAR total splices (in Log.final) vs collapsed splice junctions (in SJ.out.tab)
STAR
23 days ago by
tnminh89
▴ 10
0
votes
0
replies
160
views
Filter low express genes in microarray data
microarray
23 days ago by
Chris
▴ 280
0
votes
0
replies
590
views
Correlation between cell type prediction scores and individual gene expression in spatial transcriptomic datasets
single-cell
Spatial-Transcriptomics
24 days ago by
biocellbio
• 0
0
votes
0
replies
226
views
Phasing VCF Files and Analyzing Reads with Multiple Variants
haplotypes
vcf
phasing
24 days ago by
HarperReed
• 0
1
vote
0
replies
176
views
Simulation of label-free bottom-up proteomics expression dataset
label-free
bottom-up
lc-ms
proteomics
25 days ago by
KABILAN
▴ 70
0
votes
0
replies
194
views
Running Phylogenetic Analysis With NCBI Genome
population-genetics
phylogenetic
updated 24 days ago by
Ram
43k • written 25 days ago by
SineWave
• 0
0
votes
0
replies
192
views
RNA-seq: full length gene
RNA-seq
updated 24 days ago by
Ram
43k • written 25 days ago by
Nargis
• 0
0
votes
0
replies
173
views
Haplotype Phased Assembly Contigs to Chromosome Annotations
Assembly
phased
Haplotype
Annotation
25 days ago by
turcoa1
• 0
0
votes
0
replies
187
views
Designing single-stable RNA molecules
structure
RNA
25 days ago by
Edna
• 0
0
votes
0
replies
199
views
How to visualize/predict the final transcript from Delly output?
WGS
DELLY
25 days ago by
simplitia
▴ 130
1
vote
1
reply
272
views
Normalize scRNAseq data to housekeeping genes to compare several datasets
RNA-sequencing
housekeeping
Single-cell
normalization
updated 25 days ago by
ATpoint
82k • written 25 days ago by
AaronJaime
• 0
0
votes
0
replies
184
views
How to calculate correlation coefficient for chipseq?
chipseq
bigwigsummary
deeptools
correlation
7 days ago by
Emily
▴ 20
1
vote
0
replies
198
views
How to calculate reliable Ka/Ks or dN/dS ratio for genes of interest from VCF file
dnds
kaks
VCF
25 days ago by
rohitsatyam102
▴ 870
0
votes
0
replies
175
views
how to read graph_test output of monocle 3
monocle3
25 days ago by
synat.keam
▴ 100
0
votes
1
reply
542
views
GAPIT p-value significance threshold
GAPIT
p-value
GWAS
updated 25 days ago by
ginellegrenier
• 0 • written 5 months ago by
Clayton
• 0
0
votes
0
replies
180
views
Why not use iBAQ for calculating differential abundance of proteins?
protein
maxquant
25 days ago by
Aspire
▴ 330
0
votes
4
replies
431
views
Highest variable features in single cell data
single-cell
13 days ago by
carolofharvest
▴ 40
1
vote
3
replies
457
views
PCA plot
DESeq2
PCAplot
updated 22 days ago by
LauferVA
4.2k • written 26 days ago by
Aaliya
▴ 10
0
votes
0
replies
176
views
Can you give me an example of a small globular protein (PDB) that has disordered alpha-carbons?
protein
pdb
alpha-carbon
26 days ago by
4fzcgueyp5
• 0
1,000 results • Page
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Hello I have a quick question, I did as you said , and further added the traits, found the correlation among the modules and the traits us…
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Thank you so much Dave.
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The y axis represents the proportion of the total variance explained by each principal component. It's negative because the value (between…
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Please do a few simple Google searches before asking others for help.
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This post does not fit the theme of this forum.
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