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905 results • Page
6 of 19
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News:
Cellosaurus release 48 is available
cell-line
biocuration
cellosaurus
knowledgebase
3 months ago by
Amos Bairoch
▴ 120
2
votes
0
replies
548
views
News:
Registration open for Nextflow Summit 2023, and free online Nextflow / nf-core training
nextflow
9 months ago by
Marcel Ribeiro-Dantas
▴ 470
0
votes
0
replies
1.6k
views
News:
Registration deadline for 2017 CBW bioinformatics workshops is fast approaching
SNP
ChIP-Seq
Assembly
RNA-Seq
R
updated 11 months ago by
Ram
43k • written 7.1 years ago by
meyer.ann
▴ 30
0
votes
0
replies
1.2k
views
News:
Variant Analysis, Bioinformatics Prerequisites, & Genome Browser workshops at UC Davis
training
class
workshop
updated 11 months ago by
Ram
43k • written 5.8 years ago by
nikhil.ashok.joshi
▴ 10
0
votes
0
replies
2.4k
views
News:
WORKSHOP - Landscape genetic data analysis using R
genome
R
RNA-Seq
updated 11 months ago by
Ram
43k • written 7.1 years ago by
oliverhooker
▴ 110
1
vote
0
replies
739
views
News:
Course: Speciation Genomics in Canada - Quebec City, 2-6 September 2019
snp
R
next-gen
updated 11 months ago by
Ram
43k • written 4.9 years ago by
info
▴ 40
0
votes
0
replies
237
views
News:
Online course: Genome Assembly Using Oxford Nanopore Sequencing
Genome-Assembly
Nanopore
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
202
views
News:
Online course - Flow cytometry data analysis with R/Bioconductor
R
Flow-Cytometry
Bioconductor
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.3k
views
News:
Training in Variant Analysis @NIH, USA, Feb 27 - Mar 2, 2018
analysis
variant-analysis
training
technology
updated 11 months ago by
Ram
43k • written 6.3 years ago by
AABI
▴ 140
0
votes
0
replies
362
views
News:
Introduction to Nextflow (2 seats left)
Nextflow
Workflow
Reproducibility
updated 7 months ago by
Ram
43k • written 7 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
864
views
News:
International Conference on Advancements in Bioinformatics and Drug Discovery
sequencing
alignment
RNA-Seq
gene
sequence
updated 11 months ago by
Ram
43k • written 6.0 years ago by
bioinformatics
▴ 20
2
votes
0
replies
802
views
News:
Course: RNA-seq Analyses in non-model organisms (Berlin 11-15 November 2019)
gene
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 4.9 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
766
views
News:
Training in Creating Plots, Graphs and Maps using R @ NIH
Biomedical
next-gen
Data-analysis
updated 11 months ago by
Ram
43k • written 4.7 years ago by
AABI
▴ 140
1
vote
0
replies
834
views
News:
Utrecht Bioinformatics Center: online seminars
DNA-damage
Utrecht
epigenomics
updated 11 months ago by
Ram
43k • written 3.9 years ago by
Sergio Martínez Cuesta
▴ 230
0
votes
0
replies
394
views
News:
NCBI ClinVar XML update to accommodate somatic variants
SNP
XML
ClinVar
NCBI
3 months ago by
PeterC_NCBI
▴ 410
1
vote
0
replies
509
views
News:
Course - Introduction to Deep Learning for biologists
Genomics
Deep-Learning
Python
NGS
updated 10 months ago by
Ram
43k • written 10 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
661
views
News:
Interested in Genomic Data Visualization?
R
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
200
views
News:
Virtual Workshops with the UConn Computational Biology Core
Workshop
genomics
updated 11 weeks ago by
GenoMax
142k • written 11 weeks ago by
mia.nahom
▴ 10
0
votes
0
replies
789
views
News:
Do you want to improve your programming skills?
Programming
Unix
Bash
Python
updated 11 months ago by
Ram
43k • written 4.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.3k
views
News:
Epigenomics Workshop. 28th May - 1st June 2018. Berlin (Germany)
Epigenomics
next-gen
RNA-Seq
ChIP-Seq
updated 11 months ago by
Ram
43k • written 6.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
989
views
News:
Training in Data Integration, Analysis and Visualization @NIH, December 11-14,2018
data-analysis
data-integration
data-visualization
Training
updated 11 months ago by
Ram
43k • written 5.5 years ago by
AABI
▴ 140
0
votes
0
replies
340
views
News:
Course - Introduction to Machine Learning in R
R
Statistical-Learning
Omics
Machine-Learning
updated 6 months ago by
Ram
43k • written 6 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.0k
views
News:
Epigenomics Workshop in Berlin (28th May-1st June 2018)
RNA-Seq
ChIP-Seq
ATAC-seq
updated 11 months ago by
Ram
43k • written 6.1 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.1k
views
News:
Training - Advanced R programming - Berlin
R
Programming
updated 11 months ago by
Ram
43k • written 5.0 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
500
views
News:
Join Our Online Course: Incorporating Paleogenomes into Evolutionary Genomics Studies
Paleogenomics
Genomics
aDNA
Adaptation-Genomics
updated 8 months ago by
Ram
43k • written 8 months ago by
carlopecoraro2
★ 2.5k
2
votes
0
replies
961
views
News:
GWAS course in Canada
GWAS
updated 11 months ago by
Ram
43k • written 5.2 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
208
views
News:
Online course - Sex Chromosome Evolution
Evolution
Genomics
Sex-Chromosome
updated 3 months ago by
Ram
43k • written 3 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
196
views
News:
Online course: Network Analysis in Systems Biology with R/Bioconductor
R
RNA-seq
Network-Analysis
Bioconductor
Systems-Biology
updated 8 weeks ago by
Ram
43k • written 8 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
985
views
News:
Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
training
RNA-Seq
next-gen
updated 11 months ago by
Ram
43k • written 5.0 years ago by
AABI
▴ 140
0
votes
0
replies
162
views
News:
Online course: Genome Assembly and Annotation - 3 seats left
Genome-Assembly
Galaxy
Genome-Annotation
updated 7 weeks ago by
Ram
43k • written 7 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
350
views
News:
Course - RNAseq in non-model organisms
R
Differential-Expression-Analysis
RNA-seq
Bioconductor
updated 7 months ago by
Ram
43k • written 7 months ago by
carlopecoraro2
★ 2.5k
1
vote
0
replies
1.3k
views
News:
Pan-Structural Variation hackathon in the Cloud (Remote hackathon)
structural-variants
sequencing
updated 10 months ago by
Ram
43k • written 3.7 years ago by
Medhat
9.7k
3
votes
0
replies
562
views
News:
gnomAD v4 released
gnomad
6 months ago by
Pierre Lindenbaum
161k
0
votes
0
replies
839
views
News:
Course. Squeezing biology out of statistics: Gene set and pathway analysis in HT data
R
RNA-Seq
next-gen
ChIP-Seq
updated 11 months ago by
Ram
43k • written 5.5 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
695
views
News:
EMBO | EMBL Symposium: Biological Oscillators: Design, Mechanism, Function
Oscillation
Modelling
Imaging
updated 11 months ago by
Ram
43k • written 4.5 years ago by
EMBL Events
▴ 10
0
votes
0
replies
814
views
News:
TScourse: Introduction to GWAS (Genome-Wide Association Studies) (July 6th-10th, 2020, Crete (Greece))
PLINK
PRSice
GWAS
R
Genome
updated 11 months ago by
Ram
43k • written 4.0 years ago by
Transmitting Science communication
▴ 70
0
votes
0
replies
1.1k
views
News:
4th International Conference on Advances in Biotechnology and Bioscience (Adv.Biotech 2018)
Adv.Biotech-2018
Biotechnology
Bioscience
updated 11 months ago by
Ram
43k • written 5.9 years ago by
bioscienceconferences
• 0
0
votes
0
replies
2.2k
views
News:
Bioinformatics, Statistics and R for Next Generation Sequencing Data Analysis
next-gen-sequencing
updated 11 months ago by
Ram
43k • written 6.5 years ago by
baxy
▴ 170
1
vote
0
replies
2.2k
views
News:
UniProtKB FASTA headers: Addition of NCBI taxonomy identifier
swiss-prot
uniprot
taxonomy
fasta
updated 11 months ago by
Ram
43k • written 6.4 years ago by
Elisabeth Gasteiger
★ 2.4k
0
votes
0
replies
219
views
News:
Online course: Model-Based Demographic Inference from Population Genomics
Demographic-Inference
Population-Genomics
Demographic-Models
updated 10 weeks ago by
Ram
43k • written 10 weeks ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.2k
views
News:
Short Term Industrial Bioinformatics Training for life sciences
genome
ChIP-Seq
next-gen
R
rna-seq
updated 11 months ago by
Ram
43k • written 6.7 years ago by
Seema
• 0
0
votes
0
replies
961
views
News:
Open data conference online right now
open-access
conference
open-science
updated 11 months ago by
Ram
43k • written 6.5 years ago by
Emily
23k
0
votes
0
replies
191
views
News:
Online course: Network Analysis in R
NetworkAnalyis
R
20 days ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.8k
views
News:
Course: Introduction to Bioinformatics using Linux. Berlin, 12-16 March 2018
next-gen
alignment
Assembly
updated 11 months ago by
Ram
43k • written 6.3 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
386
views
News:
Bioinformatics Phoenix
web-server
updated 6 months ago by
Ram
43k • written 6 months ago by
garyargraves
• 0
0
votes
0
replies
1.3k
views
News:
Programming for Biomedical Researchers @NIH, USA, Nov 28-Dec 1, 2017
reseachers
program
training
updated 11 months ago by
Ram
43k • written 6.5 years ago by
AABI
▴ 140
1
vote
0
replies
1.1k
views
News:
Crowdsourcing the Advancement of Microbiome Research: precisionFDA & Mosaic Challenges Launched!
next-gen
challenge
metagenomics
updated 11 months ago by
Ram
43k • written 6.2 years ago by
sprezek
▴ 40
0
votes
0
replies
440
views
News:
Course - Phylogenetic Comparative Methods in R
Comparative-Methods
R
Phylogenetics
updated 11 months ago by
Ram
43k • written 12 months ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.1k
views
News:
2 Python courses in Berlin
Datavis
Programming
Python
updated 11 months ago by
Ram
43k • written 5.8 years ago by
carlopecoraro2
★ 2.5k
0
votes
0
replies
1.4k
views
News:
Joint webinar by Agilent Technologies and Strand Life Sciences on 'Analysis of Variants using GeneSpring GX'
agilent
variant-analysis
strand
genespring
updated 11 months ago by
Ram
43k • written 6.5 years ago by
Genomics
▴ 70
905 results • Page
6 of 19
Recent Votes
Answer: GRCh38.gmap file
Comment: GRCh38.gmap file
Answer: GRCh38.gmap file
Answer: GRCh38.gmap file
Answer: Design matrix Differential expression analysis
A: PCA plot from read count matrix from RNA-Seq
A: PCA plot from read count matrix from RNA-Seq
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Comment: The GDC Legacy Archive is retiring soon.
by
Zhenyu Zhang
★ 1.2k
If you are talking about methylation idat files, they were all migrated from legacy to the data portal. If you are talking about other pl…
Comment: How to access TCGA samples that were treated with a specific drug?
by
Zhenyu Zhang
★ 1.2k
These TCGA samples were taken 10 ~ 20 years ago, and there is no way they have been treated by the modern immunotherapy. Are you sure tha…
Comment: Design matrix Differential expression analysis
by
Gordon Smyth
★ 7.1k
> When is it recommended to use the design <- cbind(Intercept=1,Group=c(-1,-1,-1,1,1,1)) It is not recommended. No such code appears anywh…
Comment: GRCh38.gmap file
by
lorena9132
▴ 10
Hi Mathew, The .txt files provided in the link differ from the .gmap files, but after several attempts, I succeeded in generating the .gma…
Answer: GRCh38.gmap file
by
Mathew
▴ 30
Hi, I have spent some time searching for a GRCH38 map file for you. I have found a certain publication that uses a hg38 genetic map file…
Answer: Association study using SNP data
by
Mathew
▴ 30
Hi, You asked three questions so I will attempt to help the best I can **What should be the optimal GC score cutoff** It sounds li…
Comment: Design matrix Differential expression analysis
by
SHN
▴ 40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx
by
vjanve
• 0
I ran into same issue of "duplicated gene symbol(s)": 1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, : 22292 dup…
Comment: creating batch colum for batch correction
by
Expert
▴ 10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction
by
ATpoint
82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Pindel Segmentation Fault Error
by
Ruqaiya
• 0
This the tool still problematic?
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool
by
Ruqaiya
• 0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool
by
Mensur Dlakic
★ 27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool
by
Thanujay S
• 0
Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
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