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3
votes
2
replies
4.9k
views
The outputs of GISTIC
GISTIC CNV Copy number
updated 4.4 years ago by 88k • written 8.2 years ago by ▴ 200
0
votes
0
replies
1.4k
views
Comment: C: How to know whether identified mutation signatures from my data are listed in CO
5.0 years ago by agicict ▴ 200
3
votes
5
replies
1.4k
views
How to know whether identified mutation signatures from my data are listed in COSMIC site?
genome
updated 5.1 years ago by 13k • written 5.1 years ago by ▴ 200
0
votes
1
reply
1.4k
views
Comment: C: How to know whether identified mutation signatures from my data are listed in CO
5.1 years ago by agicict ▴ 200
1
vote
1
reply
873
views
How to identify RNA-seq reads spanning given genomic range?
RNA-Seq python pysam
updated 5.4 years ago by 5.8k • written 5.4 years ago by ▴ 200
12
votes
5
replies
3.6k
views
Are there downloadable DBs for hotspot mutations?
hotspot mutation cancer
updated 3.3 years ago by ▴ 60 • written 7.1 years ago by ▴ 200
1
vote
1
reply
4.4k
views
Comment: C: how to draw circular dendrogram with distance information
6.9 years ago by agicict ▴ 200
9
votes
3
replies
4.4k
views
how to draw circular dendrogram with distance information
R
updated 6.9 years ago by 88k • written 6.9 years ago by ▴ 200
7
votes
2
replies
3.6k
views
Answer: A: Are there downloadable DBs for hotspot mutations?
7.1 years ago by agicict ▴ 200
0
votes
0
replies
3.6k
views
Comment: C: Are there downloadable DBs for hotspot mutations?
7.1 years ago by agicict ▴ 200
2
votes
4
replies
2.0k
views
How to merge 24 ESP vcf files into one?
Exome seq project vcf merging
updated 7.4 years ago by ★ 1.2k • written 7.4 years ago by ▴ 200
0
votes
2
replies
1.4k
views
How to designate a sample's subtype based on microarray model without microarray but RNAseq
RNA-Seq microarray subtype
7.5 years ago by agicict ▴ 200
0
votes
0
replies
3.4k
views
Comment: C: Picard install problem
7.5 years ago by agicict ▴ 200
3
votes
2
replies
3.4k
views
Picard install problem
picard install
updated 7.5 years ago by 163k • written 7.5 years ago by ▴ 200
1
vote
1
reply
1.5k
views
Are there downloadable gene interaction DB containing in- or activation relationship?
pathway genome database relationship
updated 7.8 years ago by 27k • written 7.8 years ago by ▴ 200
10
votes
3
replies
21k
views
What is pheatmap's scale row?
R
updated 7.8 years ago by ★ 2.0k • written 7.8 years ago by ▴ 200
0
votes
0
replies
1.4k
views
How to get the number of RNA reads for mutations of exome-seq?
RNA-Seq Exome-seq mutation variant
7.9 years ago by agicict ▴ 200
1
vote
0
replies
3.5k
views
Comment: C: How to convert old entrez id to updated-entrez id in R?
8.2 years ago by agicict ▴ 200
15
votes
4
replies
3.5k
views
How to convert old entrez id to updated-entrez id in R?
entrez id R update
updated 8.2 years ago by 28k • written 8.2 years ago by ▴ 200
0
votes
0
replies
4.9k
views
Comment: C: Why does GISTIC require a markers file?
8.2 years ago by agicict ▴ 200
0
votes
1
reply
4.9k
views
Answer: A: Why does GISTIC require a markers file?
8.2 years ago by agicict ▴ 200
1
vote
1
reply
1.3k
views
Answer: A: Different results from CNV analysis resources both by Broad Institute?
8.2 years ago by agicict ▴ 200
0
votes
0
replies
1.8k
views
What is signal to interference (S2I) and fraction quantile normalization in LC-MS/MS
Proteomics LC-MS/MS mass spectrometry S2I
8.2 years ago by agicict ▴ 200
0
votes
0
replies
1.7k
views
Some GenomeWide SNP6.0 CN probes are missing compared to affymetrix's CN annotation file.
CNV SNP6.0 Affymetrix genome-wide
updated 17 months ago by 44k • written 8.5 years ago by ▴ 200
0
votes
0
replies
1.7k
views
How to make column for the number of TCGA cases when doing SNV analysis?
gene TCGA SNV cases CCLE
updated 2.1 years ago by 44k • written 8.7 years ago by ▴ 200
1
vote
0
replies
4.5k
views
Comment: C: Cosmic mutation signature
8.6 years ago by agicict ▴ 200
3
votes
2
replies
4.5k
views
Cosmic mutation signature
cosmic mutation-signature SNV
updated 2.1 years ago by 44k • written 8.6 years ago by ▴ 200
0
votes
0
replies
5.8k
views
Comment: C: How to get SNP 6.0 array data in R?
8.6 years ago by agicict ▴ 200
5
votes
3
replies
5.8k
views
How to get SNP 6.0 array data in R?
R SNP annotation
updated 2.1 years ago by 44k • written 8.6 years ago by ▴ 200
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