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questions
0
votes
2
replies
1.7k
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ERROR using CIBERSORTx Docker version
deconvolution
version
Docker
CIBERSORTx
updated 10 months ago by
gernophil
▴ 80 • written 13 months ago by
Leite
★ 1.3k
0
votes
4
replies
744
views
Genes time-series plots
time-series
genes
r
plots
Proteins
19 months ago by
Leite
★ 1.3k
7
votes
6
replies
5.5k
views
Microarray analysis in limma
limma
r
updated 3.3 years ago by
Gordon Smyth
★ 7.1k • written 6.4 years ago by
Leite
★ 1.3k
11
votes
5
replies
13k
views
series_matrix.txt in GEO are they always the normalized values?
geo
series_matrix.txt
updated 3.6 years ago by
linouhao
▴ 10 • written 5.8 years ago by
Leite
★ 1.3k
0
votes
1
reply
754
views
Analysis of proteomic data using QuantifyR
QuantifyR
r
proteomics
Progenesis
updated 3.7 years ago by
Shisheng
• 0 • written 3.7 years ago by
Leite
★ 1.3k
28
votes
17
replies
22k
views
12 follow
Dotplot for filtered pathways result
pathways
ggplot2
clusterProfiler
r
dotplot
2.4 years ago by
Leite
★ 1.3k
11
votes
11
replies
6.3k
views
Single-color Agilent array analyzing in R
R
Single-color
1-color
Agilent
Array
updated 4.0 years ago by
g.felio.rolo
• 0 • written 6.4 years ago by
Leite
★ 1.3k
0
votes
2
replies
1.2k
views
Collapsed to unique genes
r
gene
4.3 years ago by
Leite
★ 1.3k
0
votes
2
replies
4.2k
views
How to build a protein-protein interaction network?
protein
interaction
network
construction
updated 4.4 years ago by
Biostar
20 • written 6.7 years ago by
Leite
★ 1.3k
5
votes
4
replies
3.4k
views
non-coding RNAs target predictions
ncRNA
miRNA
Target prediction
updated 4.4 years ago by
Biostar
20 • written 6.6 years ago by
Leite
★ 1.3k
1
vote
4
replies
1.0k
views
Always evaluate non-experimental chip effects correction (batch effects)??
r
microarray
gene expression
updated 4.5 years ago by
Biostar
20 • written 4.7 years ago by
Leite
★ 1.3k
7
votes
6
replies
3.3k
views
Dividing the groups on the same axis using ggplot2
ggplot2
r
dotplot
graph
updated 5.3 years ago by
Prakash
★ 2.2k • written 5.3 years ago by
Leite
★ 1.3k
1
vote
1
reply
1.1k
views
Differential correlation between pathways
correlation
pathways
updated 5.4 years ago by
Biostar
20 • written 5.4 years ago by
Leite
★ 1.3k
0
votes
0
replies
938
views
How to choose the best probe between different microarray platforms?
gene
r
microarray
platforms
5.5 years ago by
Leite
★ 1.3k
3
votes
11
replies
1.7k
views
Gene expression using R
r
microarray
Reached total allocation
updated 5.8 years ago by
Santosh Anand
5.7k • written 5.8 years ago by
Leite
★ 1.3k
7
votes
10
replies
2.8k
views
What is the best way to analyze non-normalized Illumina HumanHT-12 microarray?
r
HumanHT-12
Illumina
microarray
5.9 years ago by
Leite
★ 1.3k
1
vote
3
replies
2.4k
views
I'm facing a problem to analyze microarray data from Illumina HumanHT-12
R
Illumina HumanHT-12
6.0 years ago by
Leite
★ 1.3k
9
votes
8
replies
3.2k
views
Agilent single color array
single color
array
r
microarray
updated 6.0 years ago by
Biostar
20 • written 6.1 years ago by
Leite
★ 1.3k
10
votes
6
replies
3.5k
views
What are the requirements to use data generated in other microarray experiments as a control?
R
microarray
updated 6.0 years ago by
JJ
▴ 680 • written 6.0 years ago by
Leite
★ 1.3k
2
votes
4
replies
1.3k
views
How to analyze the expression of a single gene in microarray data?
r
microarray
updated 6.0 years ago by
Hussain Ather
▴ 990 • written 6.0 years ago by
Leite
★ 1.3k
3
votes
2
replies
2.5k
views
Gene list to Metabolic pathways,
gene
metabolic
updated 6.1 years ago by
Kevin Blighe
87k • written 6.1 years ago by
Leite
★ 1.3k
4
votes
2
replies
2.7k
views
Normalization using the quantile function
R
normalization
quantile
updated 6.3 years ago by
Kevin Blighe
87k • written 6.3 years ago by
Leite
★ 1.3k
4
votes
10
replies
1.7k
views
Different gene "nomenclature" in the list of DEGS
DEGs
microarray
6.4 years ago by
Leite
★ 1.3k
19
votes
5
replies
5.2k
views
Hierarchical Clustering in single-channel agilent microarray experiment
R
Hierarchical clustering
agilent
updated 6.4 years ago by
Kevin Blighe
87k • written 6.4 years ago by
Leite
★ 1.3k
8
votes
15
replies
1.8k
views
"Studying R" Why don't I find the same results of the articles?
genome
array
gene
expression
6.5 years ago by
Leite
★ 1.3k
11
votes
7
replies
2.4k
views
How can I improve my R code?
RNA-Seq
R
gene
rna-seq
updated 6.5 years ago by
Devon Ryan
104k • written 6.5 years ago by
Leite
★ 1.3k
0
votes
2
replies
1.8k
views
Drawing Venn Diagram
venn diagram
updated 6.7 years ago by
Carlos Caicedo
▴ 210 • written 6.7 years ago by
Leite
★ 1.3k
3
votes
4
replies
1.6k
views
protein protein network validation
protein network
protein
validation
6.7 years ago by
Leite
★ 1.3k
10
votes
6
replies
1.6k
views
6 follow
What is the best way to start learning R?
sequencing
R
bioconductor limma package
updated 6.7 years ago by
vmicrobio
▴ 290 • written 6.7 years ago by
Leite
★ 1.3k
3
votes
1
reply
1.9k
views
Chromosomal localization tool
chromosomal localization
gene
chromossome
updated 7.0 years ago by
Alex Reynolds
35k • written 7.0 years ago by
Leite
★ 1.3k
1
vote
2
replies
2.8k
views
PANTHER GENE LIST
gene
panther
gene ontology
7.0 years ago by
Leite
★ 1.3k
3
votes
8
replies
2.3k
views
Prediction of peptide function, How to do?
prediction
peptide
function
software
updated 7.2 years ago by
Petr Ponomarenko
★ 2.8k • written 7.2 years ago by
Leite
★ 1.3k
0
votes
1
reply
1.4k
views
How to put the names in my graph points?
Scatterplot
statistica 10
graph
7.3 years ago by
Leite
★ 1.3k
10
votes
6
replies
5.3k
views
How to access the tranche repository (proteomics data repository)?
repository
proteomics
updated 7.4 years ago by
Lars Juhl Jensen
11k • written 7.4 years ago by
Leite
★ 1.3k
2
votes
1
reply
6.2k
views
How to interpret data from PANTHER GO?
gene
gene ontology
panther
7.6 years ago by
Leite
★ 1.3k
0
votes
2
replies
3.4k
views
Protein protein interaction network using STRING
string
protein
proteomic
PPI network
Network
updated 7.7 years ago by
Girolamo
▴ 140 • written 7.7 years ago by
Leite
★ 1.3k
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