Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : questions
1
vote
5
replies
813
views
bash command to process a line
linux command
updated 13 months ago by 21k • written 13 months ago by ▴ 140
6
votes
4
replies
548
views
Download NCBI compiled protein database for specific genus
protein NCBI
updated 13 months ago by 142k • written 13 months ago by ▴ 140
4
votes
3
replies
660
views
header shorten
command linux
updated 19 months ago by ▴ 910 • written 19 months ago by ▴ 140
1
vote
5
replies
876
views
grep sequence
grep
updated 3.0 years ago by 43k • written 3.0 years ago by ▴ 140
1
vote
1
reply
1.7k
views
Download pfam sequence
sequence
updated 3.1 years ago by 20 • written 4.0 years ago by ▴ 140
6
votes
7
replies
7.7k
views
grep things and counting line number in R
R
updated 3.2 years ago by 20 • written 6.0 years ago by ▴ 140
7
votes
6
replies
10k
views
6 follow
Counting base and nucleotide frequency of multifasta file
multifasta base count nucleotide frequency
updated 2.8 years ago by • 0 • written 5.4 years ago by ▴ 140
3
votes
3
replies
1.2k
views
writing function for logistic regression
statistic R
updated 3.4 years ago by 20 • written 5.7 years ago by ▴ 140
0
votes
3
replies
755
views
How to join multiple files in shell with variable lines?
shell
3.6 years ago by saadleeshehreen ▴ 140
5
votes
5
replies
4.4k
views
How to add file name after > in a multi-fasta file?
sequence fasta rename header
updated 2.0 years ago by ▴ 10 • written 4.0 years ago by ▴ 140
0
votes
4
replies
998
views
getting information from NCBI genebank files
Assembly NCBI genebank annotation
4.3 years ago by saadleeshehreen ▴ 140
0
votes
1
reply
635
views
How to retrieve "Assembly statistics" for all (~4200) Pseudomonas aeruginosa genome from NCBI?
genome
updated 4.4 years ago by 20 • written 5.1 years ago by ▴ 140
5
votes
3
replies
1.2k
views
How to extract a particular region from a nucleotide contig?
sequence assembly
updated 4.5 years ago by 161k • written 4.5 years ago by ▴ 140
1
vote
5
replies
4.0k
views
Salmon error message
rna-seq salmon
updated 4.5 years ago by ▴ 20 • written 5.6 years ago by ▴ 140
1
vote
7
replies
2.9k
views
loaded a sorted bam file in IGV but I can't see anything
assembly bam igv
updated 4.6 years ago by 20 • written 5.6 years ago by ▴ 140
1
vote
1
reply
846
views
Retrieving organism name
Assembly NCBI e-utlilities
updated 4.8 years ago by ★ 2.2k • written 4.8 years ago by ▴ 140
0
votes
3
replies
1.2k
views
How to fetch sequences from Proteinortho5 output containing all test species and no duplication in each genome
proteinortho5
updated 4.9 years ago by • 0 • written 5.4 years ago by ▴ 140
0
votes
1
reply
761
views
How to Deduplicate files
sequence
updated 5.0 years ago by 16k • written 5.0 years ago by ▴ 140
0
votes
1
reply
1.3k
views
Downloading PROMALS3D in local server
PROMALS3D
updated 5.1 years ago by • 0 • written 5.6 years ago by ▴ 140
0
votes
0
replies
1.5k
views
How to solve the elink error ?
NCBI elink
5.2 years ago by saadleeshehreen ▴ 140
2
votes
3
replies
1.7k
views
How to install CRISPRdisco
docker
updated 5.4 years ago by 54k • written 5.4 years ago by ▴ 140
9
votes
3
replies
3.7k
views
Install CRISPRCasFinder under Ubuntu without having administrator rights
install crispr linux
updated 5.4 years ago by 47k • written 5.4 years ago by ▴ 140
3
votes
5
replies
2.4k
views
How to retrieve information on bacterial source from NCBI?
retrieve NCBI isolationsource bacteria
updated 5.4 years ago by ★ 3.7k • written 5.4 years ago by ▴ 140
2
votes
4
replies
1.5k
views
How to change the path so that screen can take the default python path?
python script issue
updated 5.5 years ago by ★ 1.3k • written 5.5 years ago by ▴ 140
0
votes
1
reply
1.2k
views
How do I can obtain the promoter sequences of all genes of pseudomonas aeruginosa ?
promoter sequences database
updated 5.5 years ago by • 0 • written 5.6 years ago by ▴ 140
0
votes
9
replies
2.0k
views
Is there any written script to extract Organism name,SRA information and Assembly from accession id?
assembly NCBI extractinformation
5.5 years ago by saadleeshehreen ▴ 140
0
votes
2
replies
2.8k
views
How to modify the header of a perl script to use bioperl in the environment?
Bioperl perlscript
5.5 years ago by saadleeshehreen ▴ 140
1
vote
2
replies
1.6k
views
How to write a proper bed file to extract sequence?
bed file covertor extract_seq
updated 5.6 years ago by ▴ 360 • written 5.6 years ago by ▴ 140
0
votes
5
replies
1.8k
views
Problem to Understand the visualization of IGV
IGV visualization DNA sequence
updated 5.6 years ago by 104k • written 5.6 years ago by ▴ 140
0
votes
2
replies
5.1k
views
What is the meaning of alignment strand plus/minus in blastn?
blastn
5.6 years ago by saadleeshehreen ▴ 140
4
votes
5
replies
2.6k
views
Interpretation of Salmon quat.sf result
rna-seq salmon
updated 5.6 years ago by 35k • written 5.6 years ago by ▴ 140
0
votes
3
replies
1.2k
views
Obtaining RNA seq data from NCBI
RNA-Seq
updated 5.6 years ago by ▴ 120 • written 5.6 years ago by ▴ 140
0
votes
2
replies
1.2k
views
Downloading all Helix-turn-helix motif containing protein from bacteria
protein motif
updated 5.6 years ago by ★ 2.4k • written 5.6 years ago by ▴ 140
0
votes
8
replies
6.8k
views
Sra-toolkit: Prefetch error
sratoolkit
updated 5.7 years ago by ★ 1.8k • written 5.7 years ago by ▴ 140
4
votes
3
replies
4.2k
views
trouble in converting txt to bed file for bedtools
bedtools
5.7 years ago by saadleeshehreen ▴ 140
4
votes
4
replies
2.8k
views
Removing duplicate protein sequences from fasta file
blast database makeblastdb
updated 5.7 years ago by 16k • written 5.7 years ago by ▴ 140
0
votes
11
replies
3.2k
views
Gubbins not working
gubbin mauve xmfa
5.8 years ago by saadleeshehreen ▴ 140
0
votes
2
replies
1.7k
views
Downloading Genome Assembly and Annotation report from NCBI
genome
updated 5.8 years ago by 142k • written 5.8 years ago by ▴ 140
2
votes
8
replies
1.6k
views
manipulation of text by sed command
shell
5.8 years ago by saadleeshehreen ▴ 140
7
votes
4
replies
1.6k
views
barplot in R
R
updated 5.9 years ago by ▴ 120 • written 5.9 years ago by ▴ 140
2
votes
12
replies
3.8k
views
awk command to count specific field
command
updated 6.0 years ago by 21k • written 6.0 years ago by ▴ 140
0
votes
2
replies
3.8k
views
fasta to stockholm
sequence
6.0 years ago by saadleeshehreen ▴ 140
1
vote
4
replies
4.9k
views
Building Hidden Markov Model (HMM) for proteins
sequence
updated 6.0 years ago by ▴ 230 • written 6.0 years ago by ▴ 140
0
votes
1
reply
3.9k
views
gff to GFF3 converter
software error
6.0 years ago by saadleeshehreen ▴ 140
1
vote
2
replies
1.0k
views
finding novel protein
genome
updated 6.0 years ago by 35k • written 6.0 years ago by ▴ 140
0
votes
1
reply
1.1k
views
Problem with " Argument list is long"
sequence
updated 6.1 years ago by 35k • written 6.1 years ago by ▴ 140
1
vote
13
replies
1.9k
views
using parallel program
sequence
updated 6.1 years ago by 161k • written 6.1 years ago by ▴ 140
0
votes
2
replies
1.6k
views
running resfinder in parallel
genome
updated 6.1 years ago by 5.8k • written 6.1 years ago by ▴ 140
48 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6