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121,983 results • Page
249 of 2440
Sort: Rank
Rank
Views
Votes
Replies
2
votes
1
reply
1.0k
views
PRSice-2 using SNPs with extremely low P-value
PRSice-2
SNP
2.3 years ago by
Apprentice
▴ 190
7
votes
13
replies
3.9k
views
Help with running ATAC using Encode pipeline
encode
ATAC-seq
updated 2.3 years ago by
rfran010
★ 1.7k • written 2.4 years ago by
Chris
▴ 360
2
votes
3
replies
5.2k
views
How to run Picard docker image
next-gen
alignment
docker
picard
updated 12 months ago by
geocarvalho
▴ 400 • written 6.0 years ago by
elcortegano
▴ 210
0
votes
0
replies
1.1k
views
Job:
Associate Professor, Ecology
Ecology
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
jterakita
▴ 20
0
votes
2
replies
1.5k
views
What does "OS_CNSR" and "PFS_CNSR" mean?
survival
cancer
r
2.3 years ago by
AlexStar
▴ 200
0
votes
1
reply
537
views
CIBERSORT Error: File not found
CIBERSORT
updated 2.3 years ago by
ATpoint
89k • written 2.3 years ago by
jcara514
• 0
4
votes
4
replies
1.8k
views
retaining only the clusters of interest
seurat
single-cell
scRna-seq
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
shamza
• 0
0
votes
3
replies
1.5k
views
Gviz Coverage Plots
gviz
scrnaseq
cellranger
r
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Researcher
▴ 30
7
votes
6
replies
2.7k
views
Contigs to chromosomes annotation
Assembly
mapping
contigs
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
alexandru.bologa.marian
▴ 50
3
votes
4
replies
2.0k
views
Gene prediction software
pseudogene
gene
prediction
masking
updated 2.3 years ago by
Darked89
4.7k • written 2.3 years ago by
subashini.fbtpb106
▴ 20
1
vote
0
replies
663
views
Alternative approach to rarefying in 16S rRNA analysis
16S
Rarefying
rRNA
2.3 years ago by
zhangdengwei
▴ 210
1
vote
2
replies
1.3k
views
phage genome submission in ncbi genebank
phage
table2asn
ncbi
2.3 years ago by
tahsinkhan570
• 0
2
votes
3
replies
1.9k
views
Same GEO Accession, different SRR number, how to download this RNA-seq paired-end data?
sra-toolkit
fastq
RNA-seq
SRA
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
ev97
▴ 40
0
votes
0
replies
550
views
Which is the minor allele in ped file in plink?
plink
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
khn
▴ 140
1
vote
1
reply
1.2k
views
Assigned taxonomy after dada2 only "NAs" or "Mitochondria"
16S
dada2
DECIPHER
ITS
taxonomy
2.3 years ago by
mattze731
▴ 20
0
votes
0
replies
526
views
What statistical test should I use to analyse my two set of transcriptomique data?
transcriptome
2.3 years ago by
F.Bedjou
▴ 20
0
votes
0
replies
1.1k
views
Tutorial:
How to start disease research quickly and easily?
proteins
pathways
disease
research-design
genes
2.3 years ago by
Coremine Medical
▴ 20
6
votes
2
replies
2.6k
views
Visualizing Graph Alignment Format via minigraph
graph
gaf
minigraph
alignment
updated 2.3 years ago by
colindaven
8.0k • written 2.3 years ago by
ivazirabad
▴ 40
0
votes
2
replies
1.1k
views
Stratified sample assignment for analysis
experimental-design
stratification
updated 2.3 years ago by
ATpoint
89k • written 2.4 years ago by
fr
▴ 220
1
vote
2
replies
1.1k
views
What kind of statistical test does Cellranger count use?
scRNAseq
10X
Single-Cell
updated 2.3 years ago by
fracarb8
★ 1.7k • written 2.3 years ago by
hannah
• 0
3
votes
7
replies
6.7k
views
Getting Pairwise Sequence Alignment Score With Biopython
biopython
alignment
clustalw
updated 2.3 years ago by
Jonathan Lefebre
▴ 70 • written 13.8 years ago by
Lakshmi
• 0
0
votes
0
replies
677
views
Difference MITOS WebServer and MITOS 2 Webserver
MITOS2
WebServer
Difference
MITOS
2.3 years ago by
hashim.rana11
▴ 40
11
votes
9
replies
4.0k
views
Get relationships and hierarchies for GO terms
GO-terms
Gene-onthology
2.3 years ago by
DanielEB_fisk
▴ 20
0
votes
1
reply
883
views
Integrate RDS files
integration
2.3 years ago by
Andy
▴ 120
6
votes
18
replies
7.5k
views
9 follow
Eigen genes using WGCNA
wgcna
eigengenes
updated 15 months ago by
Filipe
• 0 • written 7.1 years ago by
shivangi.agarwal800
▴ 120
8
votes
6
replies
2.6k
views
Italicise annotations with pheatmap
R
Pheatmap
updated 2.3 years ago by
ATpoint
89k • written 2.3 years ago by
jamie.pike
▴ 90
2
votes
3
replies
1.3k
views
NanoSim Error "Please specify the training reads and its reference genome!"
NanoSim
RNA-seq
LongRead
2.3 years ago by
akainth
▴ 30
2
votes
8
replies
10k
views
Bedtools problem : It looks as though you have less than 3 columns at line: 1. Are you sure your files are tab-delimited
bedtools
fasta
updated 2.3 years ago by
Michael
• 0 • written 6.0 years ago by
Tomm
• 0
0
votes
4
replies
4.8k
views
Spatial transcriptomics without the h5 file
h5
spatial-transcriptomics
updated 2.3 years ago by
Arvin
• 0 • written 3.8 years ago by
jordi.diaz-manera
▴ 20
1
vote
9
replies
2.2k
views
Trying to edit VCF file
VCF
R
bcftools
snpsaurus
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
peavy
• 0
2
votes
2
replies
1.3k
views
Is it possible to add a dendrogram as a top annotation using ComplexHeatmap ?
Dendrogram
R
Heatmap
ComplexHeatmap
updated 2.3 years ago by
jv
★ 1.9k • written 2.3 years ago by
Manuel
▴ 10
0
votes
1
reply
889
views
How to quantification proteomics data
proteomics
updated 2.3 years ago by
eqoa45
• 0 • written 3.9 years ago by
LeeLee
▴ 10
1
vote
4
replies
1.5k
views
Is hg38 on the multiz 30-way alignment inaccurate?
maf
UCSC
PHAST
multiz
2.3 years ago by
Daniel
▴ 40
0
votes
2
replies
2.2k
views
How to perform statistical analysis of label free experiment using results from Proteome Discoverer?
Proteome-Discoverer
Label-Free
Proteomics
updated 2.3 years ago by
Ram
45k • written 6.8 years ago by
k2bhide
▴ 80
0
votes
0
replies
754
views
Label free quantification in Proteome discoverer software
proteomics
quantification
spectrometry
shotgun
2.3 years ago by
eqoa45
• 0
3
votes
3
replies
1.6k
views
Perl. How to retrieve data until a keyword in GenBank?
fasta
sequence
GenBank
perl
2.3 years ago by
Fungi-Beware!
▴ 10
1
vote
0
replies
632
views
How to predict gene amplification from RNAseq and ATACseq data?
amplification
ATAC
2.3 years ago by
Dan
▴ 180
6
votes
7
replies
1.9k
views
NCBI API, Perl
API
NCBI
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
alessandro.alma00
• 0
1
vote
2
replies
1.4k
views
hisat2 Error 137
hisat2
RNA-seq
2.3 years ago by
Forough
▴ 10
0
votes
1
reply
877
views
Error occured at the PHG imputation step: allele in genotype not in the variant context
PHG
Imputation
PracticalHaplotypeGraph
Haplotype
updated 2.3 years ago by
lcj34
▴ 420 • written 2.3 years ago by
xeod21
• 0
2
votes
0
replies
1.2k
views
Herald:
The Biostar Herald for Monday, June 05, 2023
herald
2.3 years ago by
Biostar
3.6k
2
votes
1
reply
873
views
Is RNA-Seq well suited for studying pseudogenes and lncRNA?
rna
ncRNA
transcriptome
pseudogene
rna-seq
updated 2.3 years ago by
rpolicastro
13k • written 2.3 years ago by
LayneSadler
▴ 90
3
votes
6
replies
1.6k
views
Embryo transcriptome
database
transcriptome
SRA
updated 2.3 years ago by
Basti
★ 2.1k • written 2.3 years ago by
firefox91
• 0
2
votes
0
replies
1.2k
views
Tutorial:
Get a list of genes associated with a drug in 1 min
drug
genes
drug-targets
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Coremine Medical
▴ 20
4
votes
3
replies
2.6k
views
Getting species names and taxa id from assembly accession number
efetch
biopython
entrez
updated 2.3 years ago by
MirianT_NCBI
▴ 800 • written 2.3 years ago by
kwhiggins27
▴ 10
0
votes
0
replies
606
views
How to extract only neutral markers from low-coverage whole genome sequencing?
low-coverage
whole-genome-sequencing
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
beausoleilmo
▴ 610
0
votes
3
replies
1.1k
views
Installation of PPFinder
gene-prediction
PPFinder
pseudogene
2.3 years ago by
subashini.fbtpb106
▴ 20
1
vote
4
replies
1.6k
views
Difference between USCS exon coordinates and ensembl
exons
Ensembl
2.3 years ago by
amy__
▴ 250
3
votes
4
replies
1.6k
views
Gene enrichment analysis
Go
enrichment
r
gene
2.3 years ago by
Eliza
▴ 30
1
vote
6
replies
1.6k
views
Query Regarding getting same value for start and end position, "DNA methylation"
DNAmethylation
methylkit
2.3 years ago by
Pankaj
• 0
121,983 results • Page
249 of 2440
Recent Votes
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154k
You can get BAM files for 10x single-cell data and they can be found under the `Data Access` tab of the SRA record under the `Original Form…
Comment: GTF file for HIV strain pNL4-3
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Since I was running in stub-run mode, the solution was to make unique names for the FASTQC process like this: touch ${sample}_${rea…
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Many researchers use the CLC Genomics Workbench and Ingenuity Pathway Analysis. CLC can be used to do secondary analysis for your dataset a…
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For example, in this image, the red area represents the differentially acetylated region returned by DiffBind. The green area is a promoter…
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Interesting pricing model : https://www.nygen.io/pricing Depending on user needs could be used (or certainly tested) for free. And this is …
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