0
votes
1
reply
878
views
4
votes
4
replies
1.4k
views
1
vote
1
reply
874
views
1
vote
3
replies
1.2k
views
updated 2.5 years ago by
GenoMax
154k
•
written 2.5 years ago by
qudrat.nii
▴
40
1
vote
4
replies
1.4k
views
0
votes
1
reply
824
views
4
votes
5
replies
2.6k
views
updated 20 months ago by
alva
•
0
•
written 2.5 years ago by
cwaingartentrabajo
•
0
1
vote
1
reply
785
views
0
votes
0
replies
434
views
0
votes
0
replies
601
views
updated 2.5 years ago by
GenoMax
154k
•
written 2.5 years ago by
not_richard
•
0
0
votes
3
replies
1.2k
views
updated 2.5 years ago by
GenoMax
154k
•
written 2.5 years ago by
andres.firrincieli
3.9k
0
votes
0
replies
667
views
2.5 years ago by
bioinformatics.girl
▴
30
1
vote
1
reply
1.6k
views
updated 2.5 years ago by
GenoMax
154k
•
written 2.5 years ago by
antoine.fauchois92
▴
20
1
vote
1
reply
964
views
updated 2.5 years ago by
Istvan Albert
103k
•
written 2.5 years ago by
Vikram
•
0
3
votes
9
replies
3.7k
views
updated 2.5 years ago by
Istvan Albert
103k
•
written 2.5 years ago by
Darked89
4.7k
1
vote
2
replies
1.1k
views
updated 2.5 years ago by
rpolicastro
13k
•
written 2.5 years ago by
bioguy24
▴
230
0
votes
0
replies
591
views
0
votes
1
reply
887
views
updated 2.5 years ago by
Ram
45k
•
written 2.5 years ago by
theadrijasaha
•
0
0
votes
2
replies
1.1k
views
updated 2.5 years ago by
Viktor Messi
•
0
•
written 3.8 years ago by
Nanditha
•
0
0
votes
1
reply
1.1k
views
0
votes
1
reply
832
views
0
votes
1
reply
2.3k
views
updated 2.5 years ago by
Matthias Zepper
5.1k
•
written 2.5 years ago by
CL
•
0
0
votes
6
replies
2.2k
views
0
votes
1
reply
977
views
updated 2.5 years ago by
Ram
45k
•
written 2.5 years ago by
theadrijasaha
•
0
0
votes
1
reply
1.1k
views
updated 2.5 years ago by
rpolicastro
13k
•
written 2.5 years ago by
imran
•
0
2
votes
2
replies
1.3k
views
3
votes
6
replies
2.8k
views
2.5 years ago by
davidmaimoun
▴
50
5
votes
6
replies
2.3k
views
2
votes
4
replies
1.9k
views
1
vote
3
replies
1.1k
views
2.5 years ago by
rubic
▴
270
1
vote
2
replies
1.5k
views
1
vote
9
replies
2.4k
views
updated 2.5 years ago by
Istvan Albert
103k
•
written 2.5 years ago by
prs
▴
20
1
vote
1
reply
879
views
updated 2.5 years ago by
Ram
45k
•
written 2.5 years ago by
zainabi8077
▴
20
4
votes
8
replies
3.1k
views
2
votes
2
replies
1.5k
views
updated 2.5 years ago by
Ram
45k
•
written 2.5 years ago by
brandnewatthis
•
0
0
votes
3
replies
1.4k
views
0
votes
3
replies
1.1k
views
updated 2.5 years ago by
Pierre Lindenbaum
166k
•
written 2.5 years ago by
jason
•
0
1
vote
1
reply
2.0k
views
updated 2.5 years ago by
Jeremy Leipzig
23k
•
written 2.5 years ago by
Jerry
▴
10
0
votes
1
reply
708
views
updated 2.5 years ago by
ATpoint
89k
•
written 2.5 years ago by
maximal_life
▴
20
0
votes
2
replies
3.5k
views
0
votes
0
replies
563
views
2.5 years ago by
theadrijasaha
•
0
3
votes
0
replies
767
views
2.5 years ago by
Dan
▴
180
0
votes
2
replies
1.4k
views
2.5 years ago by
Nai
▴
50
0
votes
0
replies
465
views
2
votes
4
replies
1.4k
views
0
votes
2
replies
1.6k
views
updated 14 months ago by
aryeesethlina5
•
0
•
written 2.5 years ago by
Olivia
•
0
2
votes
5
replies
1.8k
views
0
votes
0
replies
531
views
0
votes
0
replies
660
views
updated 2.5 years ago by
iraun
6.2k
•
written 2.5 years ago by
hellokwmin
•
0
12
votes
5
replies
6.6k
views
6 follow
updated 2.5 years ago by
alwayshope
▴
40
•
written 2.5 years ago by
melaniem
•
0
Recent Votes
Recent Locations •
All
United States, 1 minute ago
Australia, 7 minutes ago
United States, 29 minutes ago
Italy, 33 minutes ago
Mexico, 42 minutes ago
USA, 43 minutes ago
Berlin, 56 minutes ago
Recent Awards •
All
Popular Question to
oliverhooker
▴
110
Popular Question to
pinheirofabiano
▴
130
Popular Question to
carolofharvest
▴
50
Teacher to
lieven.sterck
16k
Popular Question to
Physalia-courses
★
2.6k
Popular Question to
anon
•
0
Recent Replies
Comment: DESeq2 on metagenome KO counts
by
Aleksandra
▴
160
I apologise for how that sounded; I wanted to be as detailed as possible.
Comment: GUI commercial software for 10x single cell gene expression analysis
by
Istvan Albert
103k
A comment on: "*Wonky analysis is possible even with open-source R libraries.*"
True - and arguably, the risk of a wonky analysis is actua…
Comment: GUI commercial software for 10x single cell gene expression analysis
by
GenoMax
154k
`Trailmaker` likely only supports Parse's evercode data. <br>
`BioTuring` does not appear to have published pricing. <br>
`Rosalind` appear…
Answer: GUI commercial software for 10x single cell gene expression analysis
by
firestar
★
1.7k
Found a few more when I asked around. I have no idea how good or bad these are. If anyone has used these or knows more about these, feel fr…
Comment: How to handle TrEMBL proteins without gene annotation in plasma proteomics?
by
GenoMax
154k
> I performed a standard proteomics screening workflow
What database did you use to search against? Perhaps you are using an old (not so c…
Answer: FACS quality control based on size and doublet detection in scRNA-seq
by
ATpoint
89k
No, it's unrelated. Doublets in 10x happen if two cells get enclosed into the same GEM droplet. This has nothing to do with how flow cytome…
Answer: How to handle TrEMBL proteins without gene annotation in plasma proteomics?
by
Elisabeth Gasteiger
★
2.4k
Apparently you are working with human proteins? I would strongly recommend looking only at proteins that are part of the human reference pr…
Comment: Tools to simulate Illumina short read sequences and ONT long reads with a refere
by
colindaven
8.0k
Wow, thats too long. How much RAM does your machine have, it is likely swapping
Comment: How to handle TrEMBL proteins without gene annotation in plasma proteomics?
by
Elisabeth Gasteiger
★
2.4k
Note that UniProtKB accession numbers do not have any meaning. While most ACs starting with A0A5* are indeed unreviewed (i.e. from TrEMBL),…
Comment: DESeq2 on metagenome KO counts
by
young_bioinformatician
▴
240
Thank you but sorry, your answer sounds very AI-based...
Answer: How to handle TrEMBL proteins without gene annotation in plasma proteomics?
by
Aleksandra
▴
160
For basic analysis, discard anything that isn't from Swiss-Prot. Your statistics and pathway analysis should only be based on reliable, ann…
Answer: Recommendations for 200 SNP markers genotyping
by
Aleksandra
▴
160
For a 200-SNP panel at your sample throughput, I would recommend an amplicon-based targeted sequencing approach.
The workflow involves des…
Comment: Reasonable number of SNPs in a bacterial genome.
by
dthorbur
★
3.1k
There are *a lot* of factors that can impact the number of identified SNPs. These include things like:
- Evolutionary distance from samp…
Answer: DESeq2 on metagenome KO counts
by
Aleksandra
▴
160
Your proposed workflow is indeed sound, as applying DESeq2 to KO-counts is perfectly valid; its underlying negative binomial model is metho…
Comment: Interpreting genomic features distribution for CUT&RUN peaks
by
Rozita
▴
40
The massive difference has been reproducible across the 3 biological replicates and is in line with what we would expect in terms of the bi…
Traffic: 3068 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6