3
votes
3
replies
298
views
1
vote
3
replies
1.1k
views
updated 1 day ago by
Paula Andrea
•
0
•
written 2.4 years ago by
Vic
▴
90
1
vote
3
replies
920
views
updated 1 day ago by
Ram
40k
•
written 2.1 years ago by
kristina.mahan
▴
160
1
vote
3
replies
962
views
updated 1 day ago by
Ram
40k
•
written 3.1 years ago by
kristina.mahan
▴
160
3
votes
3
replies
760
views
0
votes
3
replies
287
views
6
votes
3
replies
6.8k
views
2
votes
3
replies
109
views
1
vote
2
replies
300
views
updated 6 days ago by
Adrian Altenhoff
★
1.1k
•
written 12 days ago by
Ksel
•
0
0
votes
2
replies
246
views
0
votes
2
replies
1.1k
views
updated 1 day ago by
Ram
40k
•
written 3.0 years ago by
kristina.mahan
▴
160
1
vote
2
replies
3.2k
views
0
votes
2
replies
115
views
updated 7 hours ago by
benformatics
3.8k
•
written 8 hours ago by
paulaotero.sanchez
•
0
0
votes
2
replies
152
views
1
vote
2
replies
185
views
1
vote
2
replies
302
views
1 day ago by
safeassli
•
0
0
votes
2
replies
234
views
0
votes
2
replies
269
views
updated 11 hours ago by
biofalconch
★
1.0k
•
written 4 days ago by
Aime
•
0
0
votes
2
replies
179
views
0
votes
2
replies
178
views
2
votes
2
replies
824
views
updated 1 day ago by
Ram
40k
•
written 2.2 years ago by
kristina.mahan
▴
160
3
votes
2
replies
89
views
5 hours ago by
synat.keam
▴
80
0
votes
2
replies
196
views
5 days ago by
kirillkirilenko
▴
20
0
votes
2
replies
226
views
0
votes
2
replies
263
views
0
votes
2
replies
1.4k
views
updated 5 days ago by
bk11
★
1.4k
•
written 2.4 years ago by
sidrah.maryam
▴
50
2
votes
2
replies
251
views
0
votes
2
replies
166
views
updated 13 hours ago by
Matthias Zepper
4.1k
•
written 1 day ago by
4fzcgueyp5
•
0
2
votes
2
replies
1.0k
views
updated 1 day ago by
Ram
40k
•
written 2.6 years ago by
kristina.mahan
▴
160
0
votes
2
replies
882
views
1
vote
2
replies
396
views
5 days ago by
Miao Zhang
•
0
2
votes
2
replies
292
views
0
votes
2
replies
149
views
5 hours ago by
jachimowicz9002
▴
10
2
votes
2
replies
1.9k
views
updated 1 day ago by
Ram
40k
•
written 4.2 years ago by
kristina.mahan
▴
160
1
vote
1
reply
184
views
updated 6 days ago by
jared.andrews07
★
15k
•
written 6 days ago by
Vishal
▴
10
0
votes
1
reply
37
views
2 hours ago by
睿紘
•
0
1
vote
1
reply
196
views
0
votes
1
reply
1.3k
views
updated 1 day ago by
Ram
40k
•
written 2.6 years ago by
kristina.mahan
▴
160
0
votes
1
reply
198
views
0
votes
1
reply
143
views
0
votes
1
reply
873
views
updated 1 day ago by
Ram
40k
•
written 3.0 years ago by
kristina.mahan
▴
160
0
votes
1
reply
202
views
1
vote
1
reply
844
views
updated 1 day ago by
Ram
40k
•
written 3.2 years ago by
kristina.mahan
▴
160
1
vote
1
reply
1.7k
views
updated 1 day ago by
Ram
40k
•
written 3.2 years ago by
kristina.mahan
▴
160
1
vote
1
reply
214
views
1
vote
1
reply
1.8k
views
updated 1 day ago by
Ram
40k
•
written 3.3 years ago by
kristina.mahan
▴
160
0
votes
1
reply
536
views
2
votes
1
reply
250
views
updated 4 days ago by
Ram
40k
•
written 4 days ago by
Catalin-George
•
0
0
votes
1
reply
192
views
1
vote
1
reply
226
views
updated 5 days ago by
Zhenyu Zhang
▴
980
•
written 5 days ago by
Luke
▴
10
Recent Votes
Recent Locations •
All
Sydney, Australia., just now
Australia, 2 minutes ago
United States, 5 minutes ago
Cambridge, MA, 8 minutes ago
Ireland, 10 minutes ago
Slovakia, 20 minutes ago
United States, 21 minutes ago
Recent Awards •
All
Popular Question to
v.berriosfarias
▴
130
Popular Question to
avelarbio46
▴
30
Popular Question to
Bioinfonext
▴
440
Popular Question to
hemantcnaik
•
0
Recent Replies
Answer: tensorQTL interaction issue
by
Solal
•
0
Writing a solution for anyone interested.
The issue stems from a dosage error, some variant contains only heterozygous individuals and no h…
Answer: The Biostar Handbook. A bioinformatics e-book for beginners.
by
Qboy
•
0
Great book! I love using it to help my mentees to learn bioinformatics better. It would be also fantastic to compile all other necessary Pr…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Thanks.
I'll try.
Comment: How to get sample names and genotype for SNP in multi-sample VCF file
by
avelarbio46
▴
30
Hi! I'm trying to parallelize your code (to run on a bunch of files), but it is not working because of multiple processes spawning. Do you …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
> so I don't think the genome size is available.
Perhaps not for your specific strain but plenty of other Kpn genomes are available and th…
Comment: Kimura% of calcDivergenceFromAlign output
by
睿紘
•
0
For additional information,
"Coverage for each repeat class and divergence (Kimura)" is also the result from calcDivergenceFromAlign.pl
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
By the way, I run Rockhopper on the untrimmed files, and the full match percentage grew to 20%-30%, and there are 1552 transcripts in the u…
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Here are the total bases in 4 fastq files (after adapter removal): 1,027,852,411, 1,041,895,083, 1,121,786,520, 1,299,721,929.
I just rem…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
actually they didn't tell me which relatives were from mother side and which from father side, you are right. But how can you find related …
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
GenoMax
135k
Correct. Data that went into the assembly.
Comment: Rockhoppper - Suspiciously low percentage of perfectly aligned reads
by
langziv
▴
50
Total bases (number of reads * read length) should be calculated after removal of adapters, right?
Comment: Getting BLAST to give output whilst running
by
Ken
•
0
If I understand correctly, Blast can tell you how many results it has gotten but it can't tell you how many it is going to get, therefore i…
Comment: Understanding mother and father alleles in VCF file
by
Ram
40k
I don't understand your logic. You don't know what phasing is but are confident it is not required, and your proof is that relatives were d…
Comment: Understanding mother and father alleles in VCF file
by
c.
•
0
It's from Nebula genomics. It must be possible to deduce parental alleles, since I converted the VCF file into a Myheritage VCF file and th…
Traffic: 2089 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6