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1,000 results • Page 4 of 20
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7
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2
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News: Annotation of Zebrafish pri-miRNAs promoters and CAGE-seq detected active Drosha processing events.
Drosha-processing moRNAs pri-miRNAs zebrafish
updated 10 months ago by 39k • written 7.5 years ago by ★ 2.3k
0
votes
2
replies
764
views
News: Online Course - A Practical Introduction to NGS Data Analysis (February 01-03, 2023)
NGS DNAseq variant-calling RNAseq
4 months ago by David Langenberger 9.9k
2
votes
2
replies
1.9k
views
News: 2017 NIH SUMMER INTERNSHIP PROGRAM IN BIOMEDICAL RESEARCH (SIP)--applications open
NIH training
updated 7 weeks ago by 39k • written 6.6 years ago by 26k
2
votes
2
replies
1.4k
views
News: User-friendly Bioinformatics From RNA Seq to Biological Interpretation
machine-learning RNA-seq
updated 11 days ago by 39k • written 4.9 years ago by ▴ 10
3
votes
2
replies
1.1k
views
News: Genome Informatics meeting software list
meetings genomics informatics software
updated 18 days ago by 39k • written 5.6 years ago by 26k
1
vote
2
replies
751
views
News: New chat server (Discord) for bioinformatics
community
4 months ago by Samuel Lampa ★ 1.3k
0
votes
2
replies
2.0k
views
News: Seqnews.Net: Discover And Share News On Next-Generation Sequencing
next-gen-sequencing
updated 3 months ago by 39k • written 10.5 years ago by 9.9k
1
vote
2
replies
1.5k
views
News: Webinar: Generating interpretable maps of single cell chromatin accessibility and RNA-seq datasets with Similarity Weighted Nonnegative Embedding
scRNAseq webinar rna-seq single-cell
updated 5 days ago by 39k • written 4.1 years ago by ▴ 580
2
votes
2
replies
1.7k
views
News: Introducing a new Instructor of Physalia-Courses: Dr. January Weiner
next-gen SNP sequence
updated 7 weeks ago by 39k • written 6.5 years ago by ★ 2.3k
2
votes
2
replies
1.2k
views
News: Course: Applied Statistics and Bioinformatics with R and Bioconductor. (Berlin, 22-26 January 2018)
R next-gen-sequencing
updated 18 days ago by 39k • written 5.6 years ago by ★ 2.3k
2
votes
2
replies
2.5k
views
News: ENCODE 2015: Research Applications and Users Meeting
workshop mouse-encode encode
updated 10 weeks ago by 39k • written 8.0 years ago by 35k
0
votes
2
replies
1.4k
views
News: Free Webinar: Sequence alignment: the central step in reference based Next Generation Sequencing data analysis
next-gen SAM alignment sangenix
updated 7 weeks ago by 39k • written 6.4 years ago by ▴ 750
1
vote
2
replies
613
views
News: Online training - Introduction to Nextflow
Bionfirmatics Pipeline Workflow Netflow
10 months ago by carlopecoraro2 ★ 2.3k
6
votes
2
replies
2.3k
views
News: Interested in de novo transcriptome assembly using Trinity? Check out our interview to Brian Haas
alignment RNA-Seq
updated 7 weeks ago by 39k • written 6.2 years ago by ★ 2.3k
3
votes
2
replies
2.4k
views
News: Samtools/htslib v1.2 released
htslib samtools bcftools
updated 11 weeks ago by 39k • written 8.3 years ago by 103k
5
votes
2
replies
1.4k
views
News: #scRNABIO & organoids meeting
single-cell-sequencing microfluidics organoids
updated 11 days ago by 39k • written 4.8 years ago by ▴ 320
0
votes
2
replies
1.0k
views
News: :: FINAL CALL :: Next-Generation Sequencing Data Analysis: A Practical Introduction (December 12-14, 2022 in Munich, Germany)
rnaseq dnaseq sequencing ngs workshop
6 months ago by David Langenberger 9.9k
2
votes
2
replies
1.9k
views
News: Briefings In Bioinformatics International, Interdisciplinary, Multi-Level Bioinformatics Training And Education
education
updated 3 months ago by 39k • written 9.7 years ago by 154k
1
vote
2
replies
415
views
News: Gene Set Enrichment Analysis in R/Bioconductor
Gene-Set-Enrichment-Analysis R Cancer-Genomics GSEA
7 months ago by carlopecoraro2 ★ 2.3k
0
votes
2
replies
1.3k
views
News: Webinar on fast and accurate DNA variant calling on 26 Apr 2017
variant-calling SNP gatk strand-ngs alignment
updated 24 days ago by 39k • written 6.1 years ago by ▴ 70
0
votes
2
replies
452
views
News: Course - Metagenomics, metatranscriptomics, and multi'omics for microbial community Studies
Metagenomics Metatranscriptomics Multiomics
updated 11 weeks ago by 39k • written 11 weeks ago by ★ 2.3k
5
votes
2
replies
4.3k
views
News: GeneSCF (Gene Enrichment Tool): Advice to users
kegg GeneSCF GO annotation
updated 3 months ago by 39k • written 6.4 years ago by 7.5k
6
votes
2
replies
1.9k
views
News: RNA-Seq Data Analysis Workshop in Leipzig, Germany (09 - 12 October 2017)
NGS RNA-Seq workshop
updated 20 days ago by 39k • written 5.9 years ago by 9.9k
1
vote
2
replies
890
views
News: Sage Bionetworks is seeking researchers and data scientists to participate in software user research!
research software
updated 9 days ago by 39k • written 4.3 years ago by ▴ 30
2
votes
2
replies
2.4k
views
News: Interview Dealing with RADseq data: some tips from our instructors
NGS RADseq
updated 18 days ago by 39k • written 5.6 years ago by ★ 2.3k
4
votes
2
replies
2.9k
views
News: NCBI NOW (Next generation sequencing Online Workshop) October 13 - 23 , 2015
NCBI DNA-Seq NGS RNA-Seq
updated 9 weeks ago by 39k • written 7.7 years ago by ★ 2.2k
2
votes
2
replies
1.7k
views
News: BioC 2015, Bioconductor Annual Conference, July 20-22, Seattle, WA
Bioconductor Conference
updated 11 months ago by 39k • written 8.1 years ago by ★ 1.6k
0
votes
2
replies
1.9k
views
News: RNA-Seq Data Analysis Workshop in Berlin, Germany (13 - 16 March 2018)
NGS RNA-Seq sequencing
updated 17 days ago by 39k • written 5.4 years ago by 9.9k
0
votes
2
replies
1.7k
views
News: Webinar: Multi-omics: Challenges, opportunities and application to biomarker discovery
biomarker next-gen-sequencing multiomics cancer
updated 23 days ago by 39k • written 5.9 years ago by ▴ 750
5
votes
2
replies
3.4k
views
News: Tuesday 10/29 Live Tour Of New Features In Integrated Genome Browser 8
genome-browser RNA-seq ChIP-seq
updated 3 months ago by 39k • written 9.6 years ago by ★ 2.3k
1
vote
2
replies
1.5k
views
News: Workshop: Data analysis in high throughput biology. deadline today (2 places left)
next-gen R RNA-Seq
updated 24 days ago by 39k • written 6.2 years ago by ★ 2.3k
1
vote
2
replies
450
views
News: Course: Network Analysis in R
NetworkAnalyis R
4 months ago by carlopecoraro2 ★ 2.3k
3
votes
2
replies
3.6k
views
News: Course/Workshop: Informatics For Rna-Sequence Analysis (June, 2013)
RNA-seq
updated 3 months ago by 39k • written 10.4 years ago by 20k
0
votes
2
replies
2.4k
views
News: PART FUNDED SCHOLARSHIPS - Coding, data management, and Shiny applications using RStudio for evolutionary biologists and ecologists - May 2017
Rstudio R Shiny
updated 24 days ago by 39k • written 6.2 years ago by ▴ 110
11
votes
2
replies
3.5k
views
News: Coursera: Computational Molecular Evolution
course
updated 3 months ago by 39k • written 10.0 years ago by 154k
5
votes
2
replies
1.3k
views
News: Google Dataset Search
google
updated 11 days ago by 39k • written 4.7 years ago by 154k
2
votes
2
replies
2.0k
views
News: De Novo Transcriptome Analysis (Assembly and Differential Gene Expression in Non-Model Organisms)
Assembly RNA-Seq
updated 8 weeks ago by 39k • written 6.9 years ago by ▴ 310
6
votes
2
replies
1.4k
views
News: Biostars On The Genome Technology Cover
biostars
updated 3 months ago by 39k • written 10.4 years ago by 98k
1
vote
2
replies
1.7k
views
News: Course: Applied Statistics and Bioinformatics with R and Bioconductor
Statistics R Metagenomics Bioconductor
updated 20 days ago by 39k • written 5.9 years ago by ★ 2.3k
14
votes
2
replies
5.1k
views
News: Open Targets, identifying targets for drug development in the treatment of diseases.
database Drug open-targets
updated 8 weeks ago by 39k • written 7.0 years ago by ★ 5.2k
6
votes
2
replies
2.1k
views
News: Galaxy-specific Biostar Instance
galaxy biostars
updated 3 months ago by 39k • written 9.1 years ago by ▴ 380
1
vote
2
replies
1.4k
views
News: My own brand-new blog for bioinformatics learning
learning
updated 3 months ago by 39k • written 5.5 years ago by ▴ 100
2
votes
2
replies
1.2k
views
News: GeNets: a unified web platform for network-based genomic analyses
networks pathways RNA-Seq visualization
updated 11 days ago by 39k • written 5.0 years ago by ★ 5.2k
1
vote
2
replies
1.2k
views
News: Webinar on Diagnosis of Rare Diseases using NGS Based Multi-gene Testing- Case studies by Dr.Aparna Ganapathy on 18 Apr 2018
variant-calling rare-disease dna-seq strand-ngs
updated 13 days ago by 39k • written 5.2 years ago by ▴ 70
0
votes
2
replies
503
views
News: Seascape Genomics in R
Genomics Seascape R
updated 5 months ago by 39k • written 7 months ago by ★ 2.3k
2
votes
2
replies
774
views
News: Interested in Machine Learning?
deep-learning machine-learning
updated 5 days ago by 39k • written 4.1 years ago by ★ 2.3k
0
votes
2
replies
724
views
News: 20% Off - Next-Generation Sequencing Data Analysis: A Practical Introduction (May 3-5, 2023 in Munich, Germany)
NGS DNA-Seq variant-calling RNA-Seq workshop
5 weeks ago by David Langenberger 9.9k
15
votes
2
replies
10k
views
News: Breaking News - Illumina MiniSeq
next-gen-sequencing
updated 10 months ago by 39k • written 7.4 years ago by ★ 1.3k
13
votes
2
replies
1.2k
views
News: Thank you Biostars!
meta
updated 5 days ago by 39k • written 4.1 years ago by ▴ 140
1
vote
2
replies
2.1k
views
News: Workshop: Metagenomics, Metatranscriptomics, and multi'omics for microbial community studies (9-13 April 2018 in Berlin)
Metatranscriptomics Metagenomics
updated 16 days ago by 39k • written 5.3 years ago by ★ 2.3k
1,000 results • Page 4 of 20
Recent Votes
A: Problem regarding Software installation.
Answer: How To Predict Pseudogenes In A Genome
A: How To Predict Pseudogenes In A Genome
A: How To Predict Pseudogenes In A Genome
A: How To Predict Pseudogenes In A Genome
How To Predict Pseudogenes In A Genome
C: parsing fasta file
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Teacher to antonioggsousa 2.8k
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Recent Replies
Answer: Installation of PPFinder by GenoMax 129k
Since the software is still [**listed on the Brent lab**][1] website your best bet would be to email the investigator and ask that they fix…
Comment: How to calculate TPM from featureCounts output by rpolicastro 12k
If you want to go that route, yes.
Comment: Difference between USCS exon coordinates and ensembl by ATpoint 72k
What did you download from UCSC? 1-off usually means one file is zero-based and the other 1-based. BED files from UCSC are 0-based, Ensembl…
Comment: Alignment of case vs. control from different origin by sativus • 0
Thank you kindly for the explanation, it is highly appreciated. I suppose i was a bit confused as you quite often see people validating the…
Answer: Gene enrichment analysis by nux ▴ 10
Hello. For this you have to select 'hyper' as your method and then provide a complete list of genes which both include the candidate and no…
Comment: CNNScoreVariants Error by bestone ▴ 10
Thank you for replying I updated it worked but it gives another Error A USER ERROR has occurred: Invalid argument ' -V'.
Comment: Impute haplotypes (ImputePipelinePlugin) execution error - PHG by jrodrigu • 0
Thank you so much. I made the suggested changes. However, I still have the same problem. Please check the new log file. https://github.c…
Comment: Getting same value for start and end position, "DNA methylation" by ATpoint 72k
That's a comment, not an answer, please use `ADD COMMENT`.
Comment: Getting same value for start and end position, "DNA methylation" by bioinfo_ga ▴ 50
Are you working on bisulphite kind of data or chipseq ????
Answer: How to calculate TPM from featureCounts output by bioinfo_ga ▴ 50
hi , You can use a python package rnanorm [https://pypi.org/project/rnanorm/]. The input required are your read count values from feature …
Comment: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by by biofalconch ▴ 580
Hey, if you arelady have the barcodes, you could use samtools `samtools view -h -b -f CB:Z:TAAGAGATCCTATGTT > TAAGAGATCCTATGTT.bam` Hope…
Answer: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by by biofalconch ▴ 580
Here is a code that should work, but just like everyone else in the comments I'm a little confused why would you need to separate them: …
Comment: Make a BedGraph file by kirillkirilenko ▴ 10
It works, thank you!
Comment: CNNScoreVariants Error by Pierre Lindenbaum 154k
check you have a complete environment for GATK , including the python module "keras". https://gatk.broadinstitute.org/hc/en-us/articles/360…
Comment: How to split a scRNA reads BAM or FASTQ file to a separate file for each cell by by Cathal • 0
Did you have any luck in splitting the BAM file based on the 10x cell barcode? I would like to split a BAM file based to only include 5 spe…
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