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908 results • Page 6 of 19
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News: Online course: Network Analysis in Systems Biology with R/Bioconductor
R RNA-seq Network-Analysis Bioconductor Systems-Biology
updated 9 weeks ago by 43k • written 9 weeks ago by ★ 2.5k
0
votes
0
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533
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News: International Conference on Machine learning and Cloud Computing (MLCL 2020)
Assembly SNP sequencing
updated 11 months ago by 43k • written 4.0 years ago by ▴ 10
10
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0
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2.1k
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News: Pan-Cancer Analysis of RNA Binding Proteins in ~7000 tumor samples
Pan-Cancer mutations TCGA RNA-seq cancer-driver
updated 11 months ago by 43k • written 6.3 years ago by ▴ 860
0
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0
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292
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News: New version of ElasticBLAST (1.2.0) available from NCBI
ElasticBLAST NCBI BLAST
5 months ago by PeterC_NCBI ▴ 410
0
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0
replies
172
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News: Online course: Adaptation Genomics
StructuralVariants Selection AdaptationGenomics PopulationStructure
7 weeks ago by carlopecoraro2 ★ 2.5k
0
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0
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1.3k
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News: Course: Bayesian data analysis using brms and RStan in March 2019, Berlin, Germany
Statistics STAN BAYESIAN
updated 11 months ago by 43k • written 5.4 years ago by ★ 2.5k
0
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0
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2.1k
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News: Workshop: RADseq data analysis in Berlin
next-gen genome SNP
updated 12 months ago by 43k • written 7.0 years ago by ★ 2.5k
0
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0
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195
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News: Course - Agent-Based Modelling Using NetLogo - University of Lodz, Poland
Netlogo Individual-Based-Models Agent-Based-Models
updated 20 days ago by 43k • written 20 days ago by ★ 2.5k
1
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170
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News: shournal: A Tool for Bioinformaticians to Boost Research Reproducibility
reproducability terminal bash
9 weeks ago by David Langenberger 11k
0
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0
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184
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News: Live online course Data Manipulation with R Tidyverse, 3 and 5 of April
R manipulation tidyverse data
10 weeks ago by Sole • 0
0
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0
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1.4k
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News: Metabarcoding Workshop. 4-8 March
metabarcoding next-gen
updated 11 months ago by 43k • written 5.3 years ago by ★ 2.5k
0
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0
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244
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News: Webinar about scRNA-seq cell type prediction
scRNAseq
updated 10 weeks ago by 142k • written 10 weeks ago by • 0
0
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0
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1.1k
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News: Course "Epigenetics: on the top of genetics", Udine, Italy, 4-7 September 2018
hi-c BS-seq ChIP-Seq NGS smallRNA
updated 11 months ago by 43k • written 5.8 years ago by ★ 3.0k
0
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0
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327
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News: Course - RNAseq in non-model organisms
Pacbio RNA-seq Nanopore
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
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0
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633
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News: Call for hacking proposals: NBDC/DBCLS BioHackathon 2019
BioHackathon
updated 11 months ago by 43k • written 4.9 years ago by 161k
0
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0
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185
views
News: Online course: Analysis of Prokaryotic Pangenomes (Last call)
Prokaryotic Bacterial-Genomics Pangenomics
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
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0
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1.1k
views
News: Training - Advanced R programming - Berlin
R Programming
updated 11 months ago by 43k • written 5.0 years ago by ★ 2.5k
0
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0
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751
views
News: precisionFDA BioCompute App-a-thon October 18th Submission Deadline Reminder!
app-a-thon biocompute precisionFDA
updated 11 months ago by 43k • written 4.6 years ago by ▴ 150
2
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0
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962
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News: GWAS course in Canada
GWAS
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
0
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0
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1.4k
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News: Webinar: Mapping the single-cell atlas of the bone marrow microenvironment
webinar RNA-Seq next-gen single-cell
updated 11 months ago by 43k • written 4.8 years ago by ▴ 450
1
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0
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1.2k
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News: Hands-on Training on Cloud Computing @ NIH, USA, April 30, 2018
analysis server ngs cloud
updated 11 months ago by 43k • written 6.2 years ago by ▴ 140
0
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0
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159
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News: Online course: Food Traceability Using Genomic Tools
Nanopore Genomic-Tools Illumina Food-Traceability
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
0
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0
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1.2k
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News: Bisulfite-seq analysis and data integration course in Berlin (Apply by March 1st, 2018)
next-gen R methylation alignment
updated 11 months ago by 43k • written 6.3 years ago by ▴ 40
0
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0
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818
views
News: EMBL Conference: In situ Structural Biology - From Cryo-EM to Integrative Modelling
Biophysical-analysis Modelling Structural-Biology
updated 11 months ago by 43k • written 4.6 years ago by ▴ 10
0
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0
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904
views
News: dbVar Structural Variation Non-redundant Reference Sets (Alpha) Release
next-gen-sequencing assembly gene genome
updated 11 months ago by 43k • written 5.9 years ago by • 0
0
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0
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420
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News: New version of ElasticBLAST (1.1.0) available from NCBI
ElasticBLAST BLAST. NCBI
11 months ago by PeterC_NCBI ▴ 410
0
votes
0
replies
842
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News: Training in Statistical Analysis using R @NIH,September 4-6,2019
Analysis Statistical r-platform
updated 11 months ago by 43k • written 4.8 years ago by ▴ 140
0
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0
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387
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News: course- Population genomic inference from low-coverage whole-genome sequencing data
Whole-Genome-Sequencing Population-Genomics
updated 12 months ago by 43k • written 12 months ago by ★ 2.5k
0
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0
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399
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News: Course. -Multivariate Data Analysis with R and vegan
R vegan MultivariateDataAnalysis
8 months ago by carlopecoraro2 ★ 2.5k
2
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0
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1.0k
views
News: Free Ensembl browser workshop: Hinxton, Cambridge, UK, 17 October 2018
training course ensembl workshop
updated 11 months ago by 43k • written 5.7 years ago by ▴ 330
0
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0
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917
views
News: New Search Engine for Open Data
datasets data search-engine
updated 11 months ago by 43k • written 5.5 years ago by ▴ 10
0
votes
0
replies
1.4k
views
News: Sequel System Data Release: Iso-Seq Results for Hummingbird and Zebra Finch Brain Tissue
Iso-Seq Pacific-Biosciences SMRT-Sequencing
updated 11 months ago by 43k • written 6.7 years ago by • 0
0
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0
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945
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News: Introduction to Python for biologists - discounted places
next-gen RNA-Seq gene
updated 11 months ago by 43k • written 6.0 years ago by ▴ 60
0
votes
0
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752
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News: Training in Programming for Biomedical Researchers @NIH, July 14 - 17, 2020
Researchers Biomedical Programming
updated 11 months ago by 43k • written 4.0 years ago by ▴ 140
0
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0
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221
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News: Online course: Reproducibility in Bioinformatics
Singularity Version-Control Docker Containers
updated 5 weeks ago by 43k • written 5 weeks ago by ★ 2.5k
2
votes
0
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771
views
News: Interested in learning more about Bayesian Statistics?
Bayesian-Statistics R Stan
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
3
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0
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568
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News: gnomAD v4 released
gnomad
6 months ago by Pierre Lindenbaum 161k
2
votes
0
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1.3k
views
News: Introduction to genome-wide association studies (GWAS)
Unix GWAS R
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
1
vote
0
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645
views
News: New precisionFDA data science challenge: Help advance postmarket surveillance techniques for FDA regulated products
R
updated 11 months ago by 43k • written 4.3 years ago by ▴ 150
0
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0
replies
198
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News: Online course: Meta-analysis in R
Meta-Analysis R
updated 27 days ago by 43k • written 27 days ago by ★ 2.5k
0
votes
0
replies
1.6k
views
News: 16S/ ITS Metabarcoding course using QIIME2 platform
Metabarcoding
updated 11 months ago by 43k • written 5.2 years ago by ★ 2.5k
0
votes
0
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827
views
News: Training in Statistical Analysis using R @NIH, February 5-7,2020
statistical-analysis R training
updated 11 months ago by 43k • written 4.3 years ago by ▴ 140
0
votes
0
replies
621
views
News: Advanced Python course
Genomics Python
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.5k
0
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0
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582
views
News: course - Reproducibility in Bioinformatics
Docker Reproducibility
written 13 months ago by ★ 2.5k
0
votes
0
replies
364
views
News: Course: Genome Assembly using Oxford Nanopore Sequencing
Genome-Assembly Nanopore
updated 5 months ago by 43k • written 5 months ago by ★ 2.5k
0
votes
0
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448
views
News: 2-day Course on Introduction to Nextflow
Workflow Reproducibility Nextflow
updated 10 months ago by 43k • written 10 months ago by ★ 2.5k
0
votes
0
replies
866
views
News: Workshop on Comparative Genomics
next-gen assembly genome
updated 11 months ago by 43k • written 5.9 years ago by ★ 2.5k
0
votes
0
replies
1.8k
views
News: 2 Python courses in Berlin
next-gen python
updated 11 months ago by 43k • written 6.8 years ago by ★ 2.5k
0
votes
0
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833
views
News: :: FINAL CALL :: Only 2 seats left - RNA-Seq Data Analysis Workshop for Beginners in Leipzig, Germany
NGS RNA-Seq transcriptomics
updated 11 months ago by 43k • written 3.8 years ago by 11k
1
vote
0
replies
689
views
News: Bioconductor 3.8 Release Schedule
R bioconductor
updated 11 months ago by 43k • written 5.6 years ago by 87k
908 results • Page 6 of 19
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Difference between Pysam Pileup and Fetch
Answer: Where can I download some example BAM files?
Comment: Where can I download some example BAM files?
Where can I download some example BAM files?
Verify if all the components of a pathway are present in a genomes
removeBatchEffect explained using base R linear models
How to get number of characters (nucleotides) in fasta file
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Answer: Contig assembly task, errors by Philipp Bayer 8.4k
Feels a bit strange for an aptitude test, feels more like homework. 1) seems OK to me, just chuck them into CAP3 and see what falls out.…
Comment: Help with Biopython for Beginner by Pierre Lindenbaum 161k
> Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the c…
Answer: bcftools - reducing to "sites-only"? by Pierre Lindenbaum 161k
bcftools view -G in.vcf.gz <!-- Diabetic foot ulceration (DFU) is a devastating complication of diabetes whose pathogenesis rema…
Comment: Filtering Multi-sample VCF file for all except one Genotype by schmince • 0
I probably got some of the vocabulary wrong. I thought that "Dom HOR2932 HOR3036 HOR3726 KWSBambina Rec S42IL_124" were representing my ge…
Comment: featureCounts output assigned value higher than and HISAT2 mapping. by Ram 43k
It's featureCount**s**, not featureCount. I've edited your post and fixed all mentions of featureCounts.
Comment: kinannote software installation problems by Emanoelle • 0
Hey, I know it's been 5 years but I have the same issue. When I run the test the software is unable to perform and always deliver the follo…
Comment: STAR aligner error by Ram 43k
If they can't help you, we probably can't do much either. But we can optimize your STAR command. BAM SortedByCoordinate is the worst settin…
Answer: Obtaining Infinium Methylation450K manifest for hg38 by marco.barr ▴ 90
Hi, you can check it from github here: [https://zwdzwd.github.io/InfiniumAnnotation][1]. I don't know if this is what you are looking fo…
Comment: RNA seq analysis by ATpoint 82k
It makes absolutely no sense to conduct such an analysis. I strongly discourage you to even start with it. Results will be utterly nonsense…
Comment: Differentail gene expression results by swbarnes2 14k
Cross-posted: https://support.bioconductor.org/p/9158194/
Answer: Seurat V5 integration by Bastien Hervé 5.3k
It will depend on your context and question. I guess you will want to compare gene expression between your conditions within cell types …
Answer: Error in plotting PCA plot in seurat by Adam ▴ 30
You get this error when you try to compare two data frames that have different dimensions. Try using the traceback() command to figure out …
Comment: Applying the metacell2 algorithm using python by Wayne ★ 2.0k
Sorry, this was supposed to be a comment appended to the chain above. I didn't mean to post as an answer.
Comment: Exploring Diet Effects in Single-Cell RNA Sequencing by Adam ▴ 30
> when I looked at the expression of aging marker genes, I noticed that diets sequenced in the same batch appeared more similar. How simil…
Answer: How to compare compare two Sam files to check mapping by DavidStreid ▴ 90
Curious if others have also benefited from Picard's [CompareSAMs][1] tool. Seems to do exactly what Madhu has requested. If the headers …
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