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906 results • Page 7 of 19
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News: New precisionFDA data science challenge: Help advance postmarket surveillance techniques for FDA regulated products
R
updated 11 months ago by 43k • written 4.3 years ago by ▴ 150
2
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0
replies
805
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News: RNAseq data analysis with R and Bioconductor
R RNA-Seq RNA Bioconductor
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
2
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0
replies
1.3k
views
News: Introduction to genome-wide association studies (GWAS)
Unix GWAS R
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
0
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0
replies
674
views
News: Ensembl reduced functionality - Monday 20th January
Service Ensembl
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.4k
1
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2
replies
764
views
News: Ensembl reduced functionality, early March
ensembl
updated 11 months ago by 43k • written 4.3 years ago by 23k
0
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0
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561
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News: precisionFDA and Georgetown-ICBI Brain Cancer Predictive Modeling Challenge Submission Reminder
genome
updated 11 months ago by 43k • written 4.3 years ago by ▴ 150
0
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0
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682
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News: Training in Molecular Modeling and Molecular Dynamics @NIH,February 18-21,2020
Structural-biology Modeling next-gen
updated 11 months ago by 43k • written 4.3 years ago by ▴ 140
2
votes
0
replies
618
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News: 2-day Nextflow training course in Berlin
workflow nextflow
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
1
vote
0
replies
858
views
News: Training in Metagenomics Data Analysis @ NIH,February 10-13,2020
Metagenomics Biomedical next-gen Data-analysis
updated 11 months ago by 43k • written 4.3 years ago by ▴ 140
0
votes
0
replies
826
views
News: Training in Statistical Analysis using R @NIH, February 5-7,2020
statistical-analysis R training
updated 11 months ago by 43k • written 4.3 years ago by ▴ 140
1
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0
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1.4k
views
News: Advanced Sequencing Technologies & Bioinformatics Analysis Course at CSHL: November 3 - 15, 2020
course sequencing workshop
updated 11 months ago by 43k • written 4.3 years ago by 20k
0
votes
0
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1.0k
views
News: Course - Proteomics Using R/Bioconductor in Berlin
R Proteomics Bioconductor
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
0
votes
0
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945
views
News: NGS Data Analysis Training for Researchers - March 25-27 in Munich
NGS data-analysis training workshop
updated 11 months ago by 43k • written 4.3 years ago by 11k
4
votes
0
replies
724
views
News: Call for Bioinformatics Papers - Genes Special Issue
gene
updated 11 months ago by 43k • written 4.3 years ago by ▴ 730
0
votes
0
replies
857
views
News: Nextflow training course in Berlin
Pipeline Nextflow
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
0
votes
0
replies
587
views
News: Speciation Genomics course
R SNP next-gen
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
2
votes
0
replies
759
views
News: Eukaryotic Metabarcoding course in Berlin. Last places left.
JAMP R metabarcoding Obitools
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
2
votes
0
replies
981
views
News: Long-read nanopore Sequencing course
software-error Long-reads assembly nanopore Pacbio
updated 11 months ago by 43k • written 4.3 years ago by ★ 2.5k
1
vote
0
replies
706
views
News: Cellosaurus release 33 is available
knowledgebase cell-line
updated 11 months ago by 43k • written 4.4 years ago by ▴ 120
0
votes
0
replies
707
views
News: Bioinformatic Analysis of Next Generation Sequencing Data @NIH
Genomics rna-seq next-gen
updated 11 months ago by 43k • written 4.4 years ago by ▴ 140
0
votes
0
replies
1.0k
views
News: Physalia courses in February 2020 (Berlin)
assembly R SNP sequencing
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
1
vote
0
replies
860
views
News: UniProt: Changes to Proteomes
uniprot proteome
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
0
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0
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887
views
News: UniProt: Functional annotation of different gene products in UniProtKB/Swiss-Prot
uniprot protein xml
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
0
votes
0
replies
800
views
News: UniProt: Change of annotation topic 'Interaction'
uniprot xml
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
3
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1
reply
1.2k
views
News: UniProt: Change of FT and CC section in UniProtKB text format
uniprot protein
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
4
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1
reply
1.2k
views
News: Bioinformatics Workflows with Nextflow
Netflow reproducibility Workflows
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
0
votes
0
replies
1.1k
views
News: Discovering the world of the Long-read nanopore Sequencing
assembly Pacbio nanopore sequencing
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
0
votes
0
replies
810
views
News: UniProt: Change of line length in UniProtKB text format
uniprot
updated 11 months ago by 43k • written 4.6 years ago by ★ 2.4k
0
votes
1
reply
1.1k
views
News: Google Summer of Code 2020 announced for mentor organisations
internship GSoC
updated 11 months ago by 43k • written 4.4 years ago by 23k
2
votes
0
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771
views
News: Interested in learning more about Bayesian Statistics?
Bayesian-Statistics R Stan
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
0
votes
0
replies
728
views
News: Training in Computational Drug Design and Discovery @NIH,USA, January 21-24, 2020
Drug-design RNA-Seq genomics
updated 11 months ago by 43k • written 4.4 years ago by ▴ 140
0
votes
0
replies
730
views
News: BioC2020: mark your calendars!
conference Bioc2020
updated 11 months ago by 43k • written 4.4 years ago by 7.1k
0
votes
0
replies
792
views
News: Training in Creating Plots, Graphs and Maps using R @ NIH
Graphs R Maps Plots
updated 11 months ago by 43k • written 4.4 years ago by ▴ 140
0
votes
1
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1.6k
views
News: :: FINALL CALL :: RNA-Seq Data Analysis Workshop for Beginners - Registraion to be closed
NGS RNA-Seq Training
updated 11 months ago by 43k • written 4.4 years ago by 11k
0
votes
0
replies
713
views
News: 3rd edition of single cell RNAseq course in Berlin
next-gen-sequencing R RNA-Seq
updated 11 months ago by 43k • written 4.4 years ago by ★ 2.5k
2
votes
0
replies
732
views
News: Course in Berlin: Data visualization IN R with ggplot2
dataviz R ggplot2 tidyverse
updated 11 months ago by 43k • written 4.5 years ago by ★ 2.5k
3
votes
0
replies
812
views
News: Phylogenomics course in Berlin
snp R next-gen
updated 11 months ago by 43k • written 4.5 years ago by ★ 2.5k
0
votes
0
replies
585
views
News: 2nd National Symposium on Database Development and Biocuration
Biocuration
updated 11 months ago by 43k • written 4.5 years ago by • 0
0
votes
0
replies
770
views
News: Webinar: Single Cell Multi-omics Data Analysis in Partek Flow - Visualization of CRISPR Data
CRISPR single-cell
updated 11 months ago by 43k • written 4.5 years ago by ▴ 30
0
votes
2
replies
699
views
News: Reduced functionality of Ensembl and Ensembl Genomes on the 13th November
ensembl
updated 11 months ago by 43k • written 4.5 years ago by 23k
0
votes
0
replies
1.0k
views
News: scRNA-seq data analysis course in Berlin
scRNAseq R RNA-Seq RNA
updated 11 months ago by 43k • written 4.5 years ago by ★ 2.5k
0
votes
0
replies
690
views
News: 5th edition of the POPULATION GENOMICS course in Berlin
R genome next-gen
updated 11 months ago by 43k • written 4.5 years ago by ★ 2.5k
1
vote
0
replies
700
views
News: The precisionFDA and Georgetown-ICBI Brain Cancer Predictive Modeling and Biomarker Discovery Challenge is now live!
brain-tumor machine-learning biomarkers
updated 11 months ago by 43k • written 4.5 years ago by ▴ 150
0
votes
0
replies
801
views
News: Training in Advanced Transcriptomics (RNASeq) Analysis @ NIH, USA
sequence RNA-Seq training
updated 11 months ago by 43k • written 4.5 years ago by ▴ 140
0
votes
0
replies
821
views
News: Training in Bioinformatics for Beginners @NIH
sequence-analysis omics training
updated 11 months ago by 43k • written 4.5 years ago by ▴ 140
3
votes
0
replies
793
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News: ::FINAL CALL:: NGS Data Analysis for Beginners - 11-13 December 2019 in Munich, Germany (2 seats left)
NGS Workshop
updated 11 months ago by 43k • written 4.5 years ago by 11k
1
vote
0
replies
868
views
News: 7th International Conference on Artificial Intelligence and Applications (AIAPP 2020)
robot artificial-intelligence machine-learning
updated 11 months ago by 43k • written 4.5 years ago by ▴ 10
0
votes
0
replies
681
views
News: EMBL Course: Computing Skills For Reproducible Research: Software Carpentry
Computation
updated 11 months ago by 43k • written 4.5 years ago by ▴ 10
0
votes
0
replies
826
views
News: EMBL Course: Analysis and Integration of Transcriptome and Proteome Data
Data-analysis Proteomics Transcriptomics
updated 11 months ago by 43k • written 4.5 years ago by ▴ 10
0
votes
0
replies
889
views
News: EMBO Practical Course: Measuring Translational Dynamics by Ribosome Profiling
Ribosome-profiling Gene-expression
updated 11 months ago by 43k • written 4.5 years ago by ▴ 10
906 results • Page 7 of 19
Recent Votes
A: PCA plot from read count matrix from RNA-Seq
A: PCA plot from read count matrix from RNA-Seq
Answer: Design matrix Differential expression analysis
A: extract dendrogram cluster from pheatmap
extract dendrogram cluster from pheatmap
Answer: Searching for gene in multiple genomes
Comment: RNA velocity for smart-seq2 dataset
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Commentator to dsull ★ 6.0k
Scholar to BioinfGuru ★ 1.7k
Popular Question to drajangirija • 0
Popular Question to Thanujay S • 0
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Recent Replies
Comment: Design matrix Differential expression analysis by SHN ▴ 40
Thank you for your explanation. I am working on the cell lines and I am investigating the effect of the treatment on the expression level, …
Answer: Issues with Mixture file when using CIBERSORTx by vjanve • 0
I ran into same issue of "duplicated gene symbol(s)": 1: In CIBERSORTxFractions(sigmatrix = sigmatrix, mixture = mixture, : 22292 dup…
Comment: creating batch colum for batch correction by Expert ▴ 10
Thank you for your response. These samples were collected from the same patient at different time points(day 0, 8 and 18) and these are ind…
Comment: creating batch colum for batch correction by ATpoint 82k
Not sure I follow. Can you first of all describe which comparisons you want to make, pretending there was no batch effect at all. Write dow…
Comment: Pindel Segmentation Fault Error by Ruqaiya • 0
This the tool still problematic?
Comment: Segmentation error while using a tool by Ruqaiya • 0
Thank you for the advice, i'll keep that in mind.
Comment: Segmentation error while using a tool by Ruqaiya • 0
I am trying to reproduce some bioinformatics data from a research paper-[this paper][1] as i was asked to work on an MRSA bioinfo project, …
Answer: Segmentation error while using a tool by Mensur Dlakic ★ 27k
Most likely you didn't do anything wrong. Going by your previous post that you have only 8 GB of RAM, the most likely reason is the lack of…
Comment: Segmentation error while using a tool by Thanujay S • 0
Hey @Ruqaiya! Can you please give more details on why smalt is opted here? According to what I can see, the tool has become obsolete! Why …
Comment: Extracting mutation status from MAF files - TCGA by Thanujay S • 0
Hey! Can you explain the question further? What have you tried?
Comment: Downloading older version of a tool by Ruqaiya • 0
I tried the 2nd option only. I got the files of older version from the author but that version isn't working on my WSL, it's showing Segmen…
Comment: filtering before dada2 by GenoMax 142k
> I encountered a significant decrease in the percentage of merged reads. You can check with `bbmerge.sh` from BBMap suite to see how many…
Comment: HCL database download by GenoMax 142k
Isn't the download link available above the plot: http://bis.zju.edu.cn/HCL/data/DGE/Adult-Transverse-Colon1_dge.txt.gz
Comment: fastq screen aligner no specified. by GenoMax 142k
You need to change this configuration file to point it to the location where the aligner executable can be found. So as an example followi…
Answer: Design matrix Differential expression analysis by Gordon Smyth ★ 7.1k
The expression levels do not change but the way that you have parametrized the expression levels does change. The two design matrices give…
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