0
votes
1
reply
217
views
0
votes
0
replies
154
views
0
votes
1
reply
189
views
0
votes
0
replies
142
views
0
votes
1
reply
213
views
0
votes
2
replies
224
views
3
votes
1
reply
204
views
0
votes
0
replies
152
views
0
votes
0
replies
167
views
0
votes
0
replies
157
views
6 days ago by
RT
▴
10
0
votes
2
replies
224
views
updated 5 days ago by
Ram
43k
•
written 6 days ago by
sainavyav22
•
0
3
votes
4
replies
312
views
0
votes
0
replies
187
views
0
votes
1
reply
151
views
updated 6 days ago by
Ram
43k
•
written 6 days ago by
Lambodarswain316
•
0
1
vote
1
reply
448
views
1
vote
0
replies
138
views
1
vote
1
reply
158
views
0
votes
0
replies
117
views
updated 6 days ago by
Ram
43k
•
written 6 days ago by
curious_butterfly
•
0
1
vote
3
replies
254
views
4
votes
7
replies
463
views
0
votes
0
replies
180
views
1
vote
9
replies
381
views
updated 5 days ago by
i.sudbery
19k
•
written 8 days ago by
Assa Yeroslaviz
★
1.8k
0
votes
4
replies
296
views
4 days ago by
Researcher
▴
30
0
votes
0
replies
106
views
1
vote
7
replies
526
views
6 days ago by
deepak
•
0
2
votes
3
replies
328
views
0
votes
2
replies
268
views
0
votes
2
replies
294
views
updated 3 days ago by
Zhenyu Zhang
★
1.2k
•
written 12 days ago by
yahn
•
0
3
votes
3
replies
260
views
0
votes
0
replies
116
views
updated 2 days ago by
Ram
43k
•
written 16 days ago by
atharvakarkare14
▴
30
0
votes
0
replies
180
views
1
vote
4
replies
404
views
updated 5 days ago by
GenoMax
142k
•
written 28 days ago by
aniigodwinn
•
0
1
vote
0
replies
176
views
1
vote
4
replies
497
views
0
votes
9
replies
561
views
0
votes
4
replies
3.6k
views
updated 2 days ago by
Fungal genetics
•
0
•
written 7.1 years ago by
ntyagi654
•
0
Recent Votes
Recent Locations •
All
United States, 2 minutes ago
São Paulo, 8 minutes ago
United States, 9 minutes ago
United Kingdom, 15 minutes ago
Canada, 20 minutes ago
Russia, 21 minutes ago
UK, 21 minutes ago
Recent Awards •
All
Popular Question to
vk
▴
10
Popular Question to
Chironex
▴
40
Scholar to
rpolicastro
13k
Popular Question to
Amr
▴
160
Popular Question to
asalimih
▴
60
Recent Replies
Comment: bbmerge (bbmap) ~ error with insert size file output
by
Brian Bushnell
20k
Ah, this is a little embarrassing; those are the vectors for the neural network. I overloaded a field that was being used for the insert s…
Comment: Annotating file using bcftools
by
kl
▴
10
I corrected it. It shows the following which isn't exactly what I wanted. The second column I wanted to be the rsid extracted from the All_…
Comment: Filtering VCF files based on VAF giving incorrect results
by
Arton
•
0
These are valid questions. Does your code address the concerns you've raised? From what I understand, FilterVcf is primarily designed for h…
Answer: Calculate allelic frequency from VEP output vcf file
by
ramiro.barrantes
•
0
Found the answer here!!
https://github.com/Illumina/strelka/blob/master/docs/userGuide/README.md#somatic
Although this leads to a str…
Comment: Using VEP annotation output as the input for a second VEP annotation
by
Ram
43k
That's not a valid reason to delete the post. If that information was sensitive, posting it here was a mistake in the first place. I don't …
Answer: In one PCA plot, can I calculate the percentage of different factors that contri
by
marco.barr
▴
120
Hi, regardless of how you generated the data whether with DESeq2 or other pipeline, your differential expression matrix can be used as inpu…
Comment: Filtering VCF files based on VAF giving incorrect results
by
Pierre Lindenbaum
161k
> Do you think my commands were correct?
I'm not familiar enough with this bcftools syntax.
but what if there is no AD, what if both…
Answer: How can you *consistently* download BioProject IDs from NCBI's BioSample databas
by
Ash
▴
10
I know this was asked several years ago, but finding this post helped me solve my own problem and in the process I solved this one too.
…
Answer: DEG analysis with limma and contrast matrix using multiple Parkinson's cohorts i
by
swbarnes2
14k
Would Parkinson's be expected to have an effect on blood cells? Neurons, sure, but blood cells?
Comment: Doubt about the process of annotation, detection, identification and classificat
by
MarcosCosta
•
0
Thank you very much, you've helped me a lot.
Could you suggest a book or article that offers a complete explanation of these processes?
Comment: Filtering VCF files based on VAF giving incorrect results
by
Arton
•
0
Thank you. I can't try a completely new tool but I will keep your command for future use. Do you think my commands were correct? For exampl…
Comment: Genotyping sites with N in reference genome
by
Zhenyu Zhang
★
1.2k
Whether N -> A/T/G/C represents a variant is heavily dependent on the tool itself, and I know most tools don't. Since you don't see it in y…
Comment: calculating genomic coverage/ base overlap in R
by
marco.barr
▴
120
The code seems correct at first glance... How did you generate the data in the Excel file? Have you checked the exon annotations? You could…
Traffic: 2048 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6