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Structural Variant identification on pangenome graphs
SV variant structural graph genome
updated 1 hour ago by 7.9k • written 9 hours ago by ★ 1.8k
3
votes
1
reply
1.1k
views
What is the expected sequencing output for a Hi-C library?
sequencing hi-c illumina yield
updated 2.5 years ago by 89k • written 2.5 years ago by ★ 1.8k
0
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1
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2.1k
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Comment: Comment: fasterq-dump not downloading both reads of a pair
2.9 years ago by Panos ★ 1.8k
3
votes
3
replies
2.1k
views
fasterq-dump not downloading both reads of a pair
fasterq-dump
updated 2.5 years ago by 45k • written 2.9 years ago by ★ 1.8k
1
vote
1
reply
21k
views
Comment: Comment: GFA to Fasta file
3.2 years ago by Panos ★ 1.8k
20
votes
10
replies
14k
views
How To Use The Kegg Xml Files?
kegg pathway
updated 2.8 years ago by 45k • written 15.2 years ago by ★ 1.8k
10
votes
4
replies
7.6k
views
How To Build A Custom Model File In Genemark?
gene prediction model
updated 7.0 years ago by 45k • written 15.3 years ago by ★ 1.8k
2
votes
1
reply
12k
views
Comment: C: Training Augustus for Maker
7.5 years ago by Panos ★ 1.8k
164
votes
71
replies
69k
views
36 follow
How To Efficiently Parse A Huge Fastq File?
fastq next-gen-sequencing
updated 14 months ago by ▴ 330 • written 14.2 years ago by ★ 1.8k
2
votes
1
reply
2.4k
views
Assembly Strategy
illumina
updated 11.6 years ago by 8.3k • written 11.6 years ago by ★ 1.8k
0
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0
replies
4.9k
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Comment: C: Data Management System For Bioinformatics?
11.7 years ago by Panos ★ 1.8k
0
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0
replies
4.9k
views
Comment: C: Data Management System For Bioinformatics?
11.7 years ago by Panos ★ 1.8k
14
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6
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4.9k
views
Data Management System For Bioinformatics?
updated 11.7 years ago by 166k • written 11.7 years ago by ★ 1.8k
2
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0
replies
4.9k
views
Comment: C: Data Management System For Bioinformatics?
11.7 years ago by Panos ★ 1.8k
6
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4
replies
5.7k
views
What Is The Default Quality Encoding Expected By Bwa?
bwa illumina
updated 11.8 years ago by 28k • written 13.4 years ago by ★ 1.8k
0
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1
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4.5k
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Comment: C: Possible Gene Unflattening Error In Bp_Genbank2Gff3.Pl Bioperl Script
11.9 years ago by Panos ★ 1.8k
1
vote
3
replies
4.5k
views
Possible Gene Unflattening Error In Bp_Genbank2Gff3.Pl Bioperl Script
gff3 genbank bioperl conversion ensembl
updated 11.9 years ago by 24k • written 11.9 years ago by ★ 1.8k
6
votes
10
replies
6.7k
views
How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
blast pssm blastn
updated 12.0 years ago by ▴ 980 • written 12.0 years ago by ★ 1.8k
0
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1
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6.7k
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Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
12.0 years ago by Panos ★ 1.8k
0
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2
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6.7k
views
Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
12.0 years ago by Panos ★ 1.8k
0
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1
reply
6.7k
views
Comment: C: How To Blast A Nucleotide Profile (Pssm) Against A Nucleotide Database?
12.0 years ago by Panos ★ 1.8k
41
votes
29
replies
18k
views
17 follow
Which Assembler To Use For Metagenomic Sequences?
metagenomics assembly
updated 12.1 years ago by ★ 1.1k • written 15.5 years ago by ★ 1.8k
42
votes
26
replies
56k
views
11 follow
How To Interpret A T-Test Output Produced By R
statistics
updated 12.2 years ago by 20 • written 13.1 years ago by ★ 1.8k
8
votes
6
replies
15k
views
How To Create A Phylogram In Phylip With Bootstrap Values On It?
updated 12.3 years ago by ▴ 10 • written 14.2 years ago by ★ 1.8k
6
votes
4
replies
9.8k
views
How To Get Bootstrap Values From A Tree Generated By The Consense Program (Phylip)?
updated 12.7 years ago by 1.9k • written 14.6 years ago by ★ 1.8k
0
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0
replies
56k
views
Comment: C: How To Interpret A T-Test Output Produced By R
13.1 years ago by Panos ★ 1.8k
0
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0
replies
56k
views
Comment: C: How To Interpret A T-Test Output Produced By R
13.1 years ago by Panos ★ 1.8k
0
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1
reply
3.7k
views
Comment: C: How To Get All Different Variants Of A Peptide?
13.2 years ago by Panos ★ 1.8k
0
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0
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3.7k
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Comment: C: How To Get All Different Variants Of A Peptide?
13.2 years ago by Panos ★ 1.8k
0
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0
replies
3.7k
views
Comment: C: How To Get All Different Variants Of A Peptide?
13.2 years ago by Panos ★ 1.8k
3
votes
8
replies
3.7k
views
How To Get All Different Variants Of A Peptide?
perl
updated 13.2 years ago by ★ 2.9k • written 13.2 years ago by ★ 1.8k
3
votes
1
reply
4.9k
views
Trinity Output Filtering
trinity filtering
updated 13.4 years ago by 8.3k • written 13.4 years ago by ★ 1.8k
9
votes
1
reply
3.9k
views
What Does A "*" (Star) Mean In Mpileup'S "Read Bases" Column (The 5Th Column)?
mpileup
updated 13.4 years ago by ★ 1.2k • written 13.4 years ago by ★ 1.8k
0
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0
replies
4.0k
views
Comment: C: How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
13.4 years ago by Panos ★ 1.8k
0
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1
reply
4.0k
views
Comment: C: How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
13.4 years ago by Panos ★ 1.8k
4
votes
5
replies
4.0k
views
How To Calculate Number Of Bases Found In Introns/Cdss/Intergenic Space
intron cds
updated 13.4 years ago by 103k • written 13.4 years ago by ★ 1.8k
0
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0
replies
7.0k
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Comment: C: Can A Cds Be Also An Intron?
13.5 years ago by Panos ★ 1.8k
0
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0
replies
7.0k
views
Comment: C: Can A Cds Be Also An Intron?
13.5 years ago by Panos ★ 1.8k
15
votes
6
replies
7.0k
views
Can A Cds Be Also An Intron?
gff intron exon cds
updated 13.5 years ago by ▴ 10 • written 13.5 years ago by ★ 1.8k
0
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0
replies
15k
views
Comment: C: How To Create A Phylogram In Phylip With Bootstrap Values On It?
13.5 years ago by Panos ★ 1.8k
1
vote
0
replies
11k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
13.7 years ago by Panos ★ 1.8k
0
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0
replies
11k
views
Comment: C: What Does Bwa'S '-N' Parameter Mean?
13.7 years ago by Panos ★ 1.8k
28
votes
16
replies
11k
views
7 follow
What Does Bwa'S '-N' Parameter Mean?
bwa
updated 2.1 years ago by ▴ 20 • written 13.7 years ago by ★ 1.8k
2
votes
1
reply
11k
views
Answer: A: Perl Program For Reading Fastq Format Files
14.1 years ago by Panos ★ 1.8k
43
votes
2
replies
35k
views
What Does The "Proper Pair" Bitwise Flag Mean In A Sam File?
sam samtools
updated 14.1 years ago by ★ 1.3k • written 14.3 years ago by ★ 1.8k
6
votes
1
reply
5.7k
views
Should I Be Using K-Mer Coverage In Velvet Parameters Instead Of Nucleotide Coverage?
velvet coverage assembly
updated 14.1 years ago by 23k • written 14.1 years ago by ★ 1.8k
0
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0
replies
69k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
14.2 years ago by Panos ★ 1.8k
0
votes
0
replies
69k
views
Comment: C: How To Efficiently Parse A Huge Fastq File?
14.2 years ago by Panos ★ 1.8k
2
votes
0
replies
83k
views
Answer: A: Recommend Your Favorite Bioinformatics Books
14.2 years ago by Panos ★ 1.8k
0
votes
0
replies
11k
views
Comment: C: How To End Trim Sequences Using Prinseq?
14.2 years ago by Panos ★ 1.8k
93 results • Page 1 of 2
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