Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : questions
0
votes
0
replies
608
views
identify the miRNA response elements (mres)
R
2.3 years ago by Sam ▴ 150
3
votes
2
replies
897
views
bash/awk code to comapre tables
bash awk
updated 2.3 years ago by 8.7k • written 2.3 years ago by ▴ 150
1
vote
1
reply
1.2k
views
interaction analysis of smallRNA-seq and RNA-seq data
srnaRNA-se RNA-Seq
updated 4.2 years ago by 20 • written 7.0 years ago by ▴ 150
4
votes
4
replies
6.3k
views
what is the easiest/fastest way to convert from BAM to GTF
Bam GTF
updated 5.4 years ago by ▴ 10 • written 6.6 years ago by ▴ 150
0
votes
1
reply
4.2k
views
inbreeding coefficient (F) with vcftools
vcftools
updated 5.6 years ago by 20 • written 5.7 years ago by ▴ 150
3
votes
2
replies
1.5k
views
vcflib-popstats to calculate FIS of a subpopulation
vcflib popstats
updated 5.7 years ago by 12k • written 5.8 years ago by ▴ 150
5
votes
6
replies
1.8k
views
print non match to list lines of GTF file
bash grep awk
5.9 years ago by Sam ▴ 150
5
votes
6
replies
1.8k
views
6 follow
compare two columns of two files
awk bash
updated 6.0 years ago by ▴ 840 • written 6.0 years ago by ▴ 150
4
votes
7
replies
1.6k
views
unstranded RNA-seq lib for ncRNA prediction
lncRNA RNA-Seq
6.2 years ago by Sam ▴ 150
1
vote
3
replies
1.9k
views
featurecounts flags for lncRNA and mRNA co-expression
featurecounts co-expression
6.2 years ago by Sam ▴ 150
2
votes
1
reply
1.5k
views
co-expression output format(rcorr.adjust)
R co-expression
updated 6.2 years ago by 12k • written 6.2 years ago by ▴ 150
1
vote
5
replies
3.5k
views
WGCNA and corAndPvalue
WGCNA
6.2 years ago by Sam ▴ 150
0
votes
1
reply
1.1k
views
genie3 for lncRNAs and mRNAs co-expression
Genie3 differential co-expression analysis
6.2 years ago by Sam ▴ 150
3
votes
2
replies
1.6k
views
filter gene expression matrix
gene-expression filter
updated 3.5 years ago by 45k • written 6.2 years ago by ▴ 150
5
votes
3
replies
3.6k
views
genie3 package Error in (function (classes, fdef, mtable)
R genie3
updated 6.2 years ago by 45k • written 6.2 years ago by ▴ 150
1
vote
3
replies
2.4k
views
add cut off lines to volcano plot
volcano plot
6.2 years ago by Sam ▴ 150
0
votes
1
reply
1.9k
views
Hisat2 output for stringtie
hisat2 stringtie
updated 6.4 years ago by 5.9k • written 6.4 years ago by ▴ 150
0
votes
3
replies
2.2k
views
non-integer numReads for differential expression analysis
non-integer numReads deseq2
6.5 years ago by Sam ▴ 150
10
votes
9
replies
2.2k
views
compare two file to retrieve common lines
bash awk
6.5 years ago by Sam ▴ 150
1
vote
5
replies
1.9k
views
cufflinks large bundles warning
cufflinks star
6.6 years ago by Sam ▴ 150
0
votes
6
replies
2.7k
views
plotting according p-value
plot p-value
6.6 years ago by Sam ▴ 150
3
votes
4
replies
1.5k
views
compare two columns in text files
awk cat
6.8 years ago by Sam ▴ 150
11
votes
9
replies
10k
views
add header with awk
awk
updated 6.8 years ago by ★ 1.1k • written 6.8 years ago by ▴ 150
7
votes
4
replies
1.7k
views
text file editing
awk bash
updated 6.8 years ago by 166k • written 6.8 years ago by ▴ 150
3
votes
9
replies
1.8k
views
appropriate script for DNA alignment
alignment DNA
6.8 years ago by Sam ▴ 150
0
votes
1
reply
1.1k
views
prepare a GFF file for MOCK fasta reference
genome gff sequence
6.8 years ago by Sam ▴ 150
2
votes
2
replies
1.6k
views
plant long non-coding RNA
RNA-seq lncRNA
updated 6.8 years ago by 7.4k • written 6.8 years ago by ▴ 150
3
votes
2
replies
980
views
listing library names
bash
updated 6.9 years ago by 150k • written 6.9 years ago by ▴ 150
23
votes
14
replies
4.2k
views
6 follow
changing the name of files
bash awk
updated 6.9 years ago by 8.7k • written 6.9 years ago by ▴ 150
0
votes
1
reply
1.0k
views
retrieving long noncoding RNAs from PLANT RNA-seq
long non coding RNA
7.0 years ago by Sam ▴ 150
1
vote
0
replies
2.1k
views
GBS and TASSEL-GBS v2
GBS
7.0 years ago by Sam ▴ 150
3
votes
32
replies
4.4k
views
fastqc report for degradome reads
fastqc adaptor
7.0 years ago by Sam ▴ 150
4
votes
18
replies
4.0k
views
common sequence between multi fasta file
bash
7.1 years ago by Sam ▴ 150
1
vote
1
reply
1.3k
views
degradom sequence lenght
degradom
7.1 years ago by Sam ▴ 150
2
votes
4
replies
1.4k
views
perl path in mirdeep
perl env
updated 7.1 years ago by 35k • written 7.1 years ago by ▴ 150
1
vote
4
replies
1.4k
views
bash and awk code
awk bash
updated 7.3 years ago by 166k • written 7.3 years ago by ▴ 150
4
votes
3
replies
3.7k
views
Deseq2 count matrix
R rna-seq deseq2
updated 7.4 years ago by 20 • written 7.5 years ago by ▴ 150
0
votes
0
replies
1.6k
views
problem with bowtie alignment
bowtie smallRNA
updated 7.4 years ago by 20 • written 7.4 years ago by ▴ 150
4
votes
14
replies
6.3k
views
heatmap 2 error
heatmap
7.4 years ago by Sam ▴ 150
1
vote
21
replies
3.4k
views
fastq file data
RNA-seq fastq
updated 7.4 years ago by 102k • written 7.4 years ago by ▴ 150
4
votes
2
replies
1.2k
views
edit text file
bash awk
updated 7.5 years ago by 105k • written 7.5 years ago by ▴ 150
7
votes
5
replies
2.9k
views
miRNAs interaction networks analysis
miRNAs networks
updated 7.5 years ago by ★ 1.3k • written 7.5 years ago by ▴ 150
4
votes
18
replies
3.4k
views
unique list based on multiple column
awk sort
updated 7.5 years ago by ▴ 190 • written 7.5 years ago by ▴ 150
5
votes
11
replies
2.3k
views
compare two text file
awk bash
7.5 years ago by Sam ▴ 150
0
votes
0
replies
1.4k
views
categorization of miRNA and miRNA star
miRNA/miRNA*
7.5 years ago by Sam ▴ 150
11
votes
42
replies
5.5k
views
over presented kmer in fastq
fastqc RNA-Seq
7.5 years ago by Sam ▴ 150
23
votes
25
replies
3.4k
views
bash and awk code
bash awk terminal
2.4 years ago by Sam ▴ 150
1
vote
1
reply
1.1k
views
RNA-seq experiments with TopHat2
RNA-Seq rna-seq alignment
7.6 years ago by Sam ▴ 150
2
votes
9
replies
2.6k
views
classification of small RNA-seq
RNA-Seq alignment
7.6 years ago by Sam ▴ 150
49 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6