User: Jordan

3

votes

4

replies

2.0k

views

ensembl hugo tpm-calculator tpm rna-seq

updated 4.2 years ago by Istvan Albert 102k • written 4.2 years ago by Jordan ★ 1.3k

2

votes

4

replies

3.5k

views

cnvkit .cnr wgs cnv

updated 4.8 years ago by Kevin Blighe 89k • written 5.2 years ago by Jordan ★ 1.3k

4

votes

8

replies

3.5k

views

r microarray

updated 4.8 years ago by Gordon Smyth ★ 8.2k • written 11.3 years ago by Jordan ★ 1.3k

0

votes

2

replies

2.5k

views

vep vcf2maf variant-calling vcfs maf

5.1 years ago by Jordan ★ 1.3k

2

votes

3

replies

2.2k

views

cnvkit wgs cnv

updated 5.2 years ago by brunobsouzaa ▴ 840 • written 5.2 years ago by Jordan ★ 1.3k

0

votes

6

replies

1.9k

views

cnvkit wgs scatter-plot

updated 5.2 years ago by d-cameron ★ 2.9k • written 5.2 years ago by Jordan ★ 1.3k

2

votes

1

reply

1.6k

views

mutect2 panelofnormals variant-calling gatk

updated 5.6 years ago by Kevin Blighe 89k • written 5.6 years ago by Jordan ★ 1.3k

2

votes

7

replies

11k

views

bam mapping read

updated 6.9 years ago by ammar.husami • 0 • written 12.3 years ago by Jordan ★ 1.3k

2

votes

3

replies

1.7k

views

RNA-Seq ngs

updated 7.4 years ago by dariober 15k • written 7.4 years ago by Jordan ★ 1.3k

4

votes

4

replies

5.5k

views

mapper.pl RNA-Seq mirdeep2

updated 3.8 years ago by Ram 45k • written 11.1 years ago by Jordan ★ 1.3k

2

votes

5

replies

3.2k

views

solid read

updated 7.6 years ago by Biostar 20 • written 12.4 years ago by Jordan ★ 1.3k

61

votes

23

replies

64k

views

15 follow

bam mapping

updated 19 months ago by Lluís R. ★ 1.2k • written 12.3 years ago by Jordan ★ 1.3k

4

votes

3

replies

5.2k

views

tcga

updated 9.5 years ago by EagleEye 7.6k • written 11.4 years ago by Jordan ★ 1.3k

7

votes

7

replies

7.0k

views

mirna

updated 9.8 years ago by Biostar 20 • written 11.4 years ago by Jordan ★ 1.3k

1

vote

3

replies

5.0k

views

varscan2 variant-calling SNP somatic

updated 10.5 years ago by Ying W ★ 4.3k • written 10.5 years ago by Jordan ★ 1.3k

2

votes

1

reply

3.2k

views

duplicate-removal picard-tools SOLiD BAMs NGS

10.5 years ago by Jordan ★ 1.3k

9

votes

6

replies

9.2k

views

markduplicates samtools BAM sort picard

updated 3.8 years ago by Ram 45k • written 11.2 years ago by Jordan ★ 1.3k

2

votes

3

replies

3.6k

views

MuTect vcf variant-calling

updated 3.5 years ago by Ram 45k • written 10.7 years ago by Jordan ★ 1.3k

6

votes

5

replies

9.8k

views

ion-torrent variant-calling

updated 3.5 years ago by Ram 45k • written 10.8 years ago by Jordan ★ 1.3k

3

votes

7

replies

5.1k

views

somaticsniper vcf variant-calling depth

updated 3.6 years ago by Ram 45k • written 11.0 years ago by Jordan ★ 1.3k

3

votes

4

replies

7.8k

views

gene igv

updated 2.5 years ago by Ram 45k • written 11.0 years ago by Jordan ★ 1.3k

2

votes

3

replies

2.8k

views

tcga pipeline variant-calling

updated 3.8 years ago by Ram 45k • written 11.1 years ago by Jordan ★ 1.3k

8

votes

4

replies

5.3k

views

sequencing ngs transposable elements

updated 11.2 years ago by Casey Bergman 18k • written 11.8 years ago by Jordan ★ 1.3k

2

votes

8

replies

3.9k

views

mapping shrimp2 solid paired-end

updated 3.8 years ago by Ram 45k • written 11.2 years ago by Jordan ★ 1.3k

2

votes

11

replies

5.9k

views

11.4 years ago by Jordan ★ 1.3k

10

votes

8

replies

8.8k

views

7 follow

vcf variant

updated 11.4 years ago by swbarnes2 15k • written 11.7 years ago by Jordan ★ 1.3k

0

votes

3

replies

3.1k

views

sv

updated 3.5 years ago by Ram 45k • written 11.6 years ago by Jordan ★ 1.3k

2

votes

0

replies

3.4k

views

bam vcf variant-calling

updated 11.5 years ago by Biostar 20 • written 12.2 years ago by Jordan ★ 1.3k

6

votes

3

replies

6.2k

views

rna-seq tophat2 cuffdiff

updated 11.6 years ago by Devon Ryan 105k • written 11.6 years ago by Jordan ★ 1.3k

1

vote

4

replies

6.8k

views

cuffdiff tophat2 rna-seq

updated 11.6 years ago by Pierre Lindenbaum 166k • written 11.6 years ago by Jordan ★ 1.3k

0

votes

0

replies

3.6k

views

cnv output

11.8 years ago by Jordan ★ 1.3k

2

votes

3

replies

4.0k

views

cnv copynumber

updated 11.8 years ago by dankoboldt ▴ 140 • written 11.8 years ago by Jordan ★ 1.3k

1

vote

5

replies

4.7k

views

error mpileup

updated 11.8 years ago by dankoboldt ▴ 140 • written 12.1 years ago by Jordan ★ 1.3k

2

votes

2

replies

3.8k

views

samtools mpileup variant-calling vcf

updated 11.9 years ago by Pierre Lindenbaum 166k • written 11.9 years ago by Jordan ★ 1.3k

9

votes

3

replies

4.0k

views

dbsnp

updated 3.6 years ago by Ram 45k • written 12.0 years ago by Jordan ★ 1.3k

6

votes

4

replies

11k

views

macs peak-calling chip-seq

updated 2.5 years ago by Ram 45k • written 12.0 years ago by Jordan ★ 1.3k

6

votes

5

replies

7.0k

views

bed

updated 12.1 years ago by Ido Tamir 5.2k • written 12.1 years ago by Jordan ★ 1.3k

2

votes

4

replies

5.9k

views

coverage depth-of-coverage bedtools

updated 12.1 years ago by Jorge Amigo 14k • written 12.1 years ago by Jordan ★ 1.3k

8

votes

5

replies

5.9k

views

human-exome

updated 2.2 years ago by Ram 45k • written 12.1 years ago by Jordan ★ 1.3k

0

votes

4

replies

2.4k

views

chip-seq mapping

updated 12.1 years ago by Mikael Huss 4.8k • written 12.1 years ago by Jordan ★ 1.3k

12

votes

4

replies

12k

views

macs chip-seq

updated 12.1 years ago by KCC ★ 4.1k • written 12.1 years ago by Jordan ★ 1.3k

3

votes

5

replies

2.6k

views

bam samtools sort

updated 12.1 years ago by Ashutosh Pandey 12k • written 12.1 years ago by Jordan ★ 1.3k

0

votes

1

reply

3.5k

views

genome

updated 2.2 years ago by Ram 45k • written 12.1 years ago by Jordan ★ 1.3k

2

votes

4

replies

2.7k

views

tcga cancer

updated 12.2 years ago by Chris Miller 22k • written 12.2 years ago by Jordan ★ 1.3k

2

votes

4

replies

5.2k

views

cufflinks gtf gene rna-seq

updated 12.2 years ago by Alex Reynolds 36k • written 12.2 years ago by Jordan ★ 1.3k

2

votes

2

replies

3.1k

views

bam

updated 12.3 years ago by Ashutosh Pandey 12k • written 12.3 years ago by Jordan ★ 1.3k

0

votes

7

replies

3.0k

views

mapping trimming

updated 12.4 years ago by Ashutosh Pandey 12k • written 12.4 years ago by Jordan ★ 1.3k

0

votes

1

reply

1.9k

views

solid

updated 12.4 years ago by Ashutosh Pandey 12k • written 12.4 years ago by Jordan ★ 1.3k

0

votes

3

replies

2.3k

views

reference

12.4 years ago by Jordan ★ 1.3k

6

votes

10

replies

7.6k

views

fastq fastqc solid quality

updated 12.4 years ago by William ★ 5.3k • written 12.4 years ago by Jordan ★ 1.3k