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121,981 results • Page
247 of 2440
Sort: Rank
Rank
Views
Votes
Replies
2
votes
3
replies
1.1k
views
Using TRF in multiple files
tandem
TRF
repeats
2.3 years ago by
schlogl
▴ 180
3
votes
4
replies
1.4k
views
Need help editing text in the shell
bash
shell
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
gallardodiazmiriam
▴ 20
10
votes
10
replies
3.5k
views
PyWGCNA
WGCNA
2.3 years ago by
yoshifumimiya
▴ 50
1
vote
4
replies
2.4k
views
Functional clustering of proteins
functional-clustering
proteins
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
nadavi
• 0
0
votes
0
replies
502
views
look for genes in CTCF's domains using Hi-C data
CTCF
Hi-C
2.3 years ago by
Noa
• 0
2
votes
2
replies
1.3k
views
How does ncbi-blastP calculate the score ? (Why it is lower than mean-diagonal(blossum62) * length ) ?
protein
alignment
2.3 years ago by
Alexander
▴ 220
0
votes
3
replies
1.2k
views
How i can get unalignment read in hisat2 ?
hisat2
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
Ahmed
▴ 10
1
vote
0
replies
914
views
News:
Course - Introduction to Deep Learning for biologists
Genomics
Deep-Learning
Python
NGS
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Physalia-courses
★ 2.6k
0
votes
1
reply
900
views
About Bedgraph file basics
Bedgraph
updated 2.3 years ago by
ATpoint
89k • written 2.3 years ago by
minakshiboruahassam
• 0
0
votes
1
reply
786
views
How do I extract references from ClinVar for all variants in individual gene?
ClinVar
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
irina.st.louis4
• 0
0
votes
1
reply
1.1k
views
How to write a Python program that takes the sequences.fasta file and writes N single-sequence FASTA files, called sequence{number}.fasta, each one c…
fasta
python
sequence
updated 2.3 years ago by
Pierre Lindenbaum
166k • written 2.3 years ago by
Ειρήνη
• 0
0
votes
0
replies
2.1k
views
Cellchat error: data.signaling matrix error when using mouse database (Error in identifyOverExpressedGenes)
Seurat
Cellchat
scRNA
2.3 years ago by
Aydin
• 0
4
votes
3
replies
3.1k
views
Trying to use hmmer to search genes over metagenome assembled genomes
MAGs
genes
hmmer
2.3 years ago by
v.berriosfarias
▴ 140
3
votes
4
replies
1.9k
views
Solving environment: failed with initial frozen solve. Retrying with flexible solve. PackagesNotFoundError: The following packages are not available…
samtools
conda
bioconda
2.3 years ago by
Ahmed
▴ 10
0
votes
2
replies
1.3k
views
amrfinder not working on loop?
amrfinderplus
updated 2.3 years ago by
Pierre Lindenbaum
166k • written 2.3 years ago by
Sapphire
▴ 10
2
votes
2
replies
1.3k
views
hisat2-align exited with value 1
hisat2
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Ahmed
▴ 10
0
votes
1
reply
1.3k
views
novel miRNA naming(annotation)
snp
RNA-Seq
genome
miRNA
updated 2.3 years ago by
Ram
45k • written 4.8 years ago by
zahidhussaindogar113
▴ 10
2
votes
2
replies
1.0k
views
Identify similarly mapped reads in BAM/SAM?
bam
igv
sam
python
r
2.3 years ago by
Eliveri
▴ 350
1
vote
1
reply
778
views
R ggplot
R
ggplot
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
lela2314
• 0
5
votes
5
replies
2.4k
views
multiqc: group samples by population + boxplot ?
multiqc
updated 19 months ago by
Phil Ewels
★ 1.5k • written 2.3 years ago by
Pierre Lindenbaum
166k
0
votes
0
replies
746
views
Why in Heatmap plot my case and control samples of single cell dataset are not well clustered?
DESeq2
single-cell
Heatmap
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
paria
▴ 110
2
votes
6
replies
2.2k
views
no output from GATK CombineGVCFs
combineGVCFs
gatk
updated 2.3 years ago by
Pierre Lindenbaum
166k • written 3.0 years ago by
liyong
▴ 90
0
votes
2
replies
1.0k
views
How to deal with SRA file without .SRA
SRA
2.3 years ago by
Andy
▴ 120
0
votes
6
replies
1.7k
views
BED files
Chip-seq
BED
updated 2.3 years ago by
Alex Reynolds
36k • written 2.3 years ago by
lela2314
• 0
1
vote
0
replies
707
views
How does kallisto genomebam handle multi mapping reads?
kallisto
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
bioinfo
▴ 160
1
vote
6
replies
2.1k
views
GISTIC from ASCAT
alteration
copy-number
sequencing
2.3 years ago by
Hyper_Odin
▴ 320
8
votes
7
replies
1.9k
views
Why does Ensembl VEP provide HGVSg for some variants and not others?
vcf
VEP
2.3 years ago by
Jeremy Leipzig
23k
0
votes
0
replies
503
views
using non-matched read counts for differential expression analysis (ncRNA)?
sRNAbench
RNA-seq
expression-matrix
sRNAtoolbox
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
danazeid3
• 0
1
vote
6
replies
3.2k
views
target vs. bait BED files for Illumina WES
sequencing
Illumina
WES
whole-exome
updated 12 months ago by
GenoMax
154k • written 3.2 years ago by
Juan Cordero
▴ 140
2
votes
2
replies
951
views
I don't really understand what fold mean means
coverage
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
ManuelDB
▴ 110
0
votes
1
reply
1.1k
views
Job:
DevelopMed MSCA COFUND Fellowship Programme in Precision Oncology
postdoc
training
precision-oncology
2.3 years ago by
developmed
• 0
2
votes
1
reply
751
views
Is NA12878 Illumina Platinum set wgs or wes dataset
wgs
wes
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
guntul
▴ 40
0
votes
0
replies
760
views
how to ensure that embedding for the new data is initialized based on the embedding of the existing data in UMAP?
UMAP
2.3 years ago by
Raheleh
▴ 260
0
votes
1
reply
855
views
What's the correct way to store bam record in a vector and free them?
htslib
updated 2.3 years ago by
Pierre Lindenbaum
166k • written 2.3 years ago by
PeterWu
▴ 20
0
votes
0
replies
497
views
cannot find genes with abricate and VFDB
abricate
wgs
vfdb
2.3 years ago by
luciano.g
• 0
1
vote
1
reply
871
views
How do I specify the Recalibration_data.table for "PrintReads" in GATK 4.3, if the tool does not admit -BQSR as an option anymore?
BaseRecalibrator
BQSR
printreads
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
javiflaja
▴ 50
2
votes
1
reply
987
views
Extract variants/SNPs with T>G substitution from a VCF file
VCF
SNP
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Nanu
• 0
2
votes
1
reply
949
views
Filtering content in heatmap to highest values
R
heatmap
ggplot2
2.3 years ago by
cthangav
▴ 110
4
votes
2
replies
1.7k
views
No @hd header returned in sam file when running bwa mem
samtools
bam
bwa
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
MboiTui
▴ 20
6
votes
8
replies
2.5k
views
conda: command not found: gatk.
conda
gatk
2.3 years ago by
bestone
▴ 30
2
votes
3
replies
1.4k
views
Forum:
Mapping a predicted sequence to a genome
predicted
map
alignment
sequence
updated 2.3 years ago by
Mensur Dlakic
★ 30k • written 2.3 years ago by
Andy
• 0
3
votes
6
replies
2.3k
views
How to get information about promoter from bulk-RNAseq?
promoter
R
RNA-seq
updated 2.3 years ago by
rfran010
★ 1.7k • written 2.3 years ago by
camillab.
▴ 160
2
votes
5
replies
2.5k
views
Creating a local version of Clustered NR database
diamond
clustered-nr
blast
updated 2.3 years ago by
GenoMax
154k • written 2.4 years ago by
Wilford203
▴ 10
1
vote
2
replies
1.3k
views
If I execute "AddOrReplaceReadGroups" on a sorted and duplicate-marked .bam file, do I have to re-sort and re-mark duplicates?
picard
AddOrReplaceReadGroups
bam
read-groups
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
javiflaja
▴ 50
4
votes
2
replies
1.5k
views
where to obtain hg19 reference transcriptome in gencode
hg19
salmon
gencode
2.3 years ago by
Josh
▴ 20
0
votes
0
replies
723
views
How are the reads assigned to genes in strand-specific RNAseq libraries?
strand-specific
strandness
RNAseq
2.3 years ago by
Sib
▴ 80
0
votes
1
reply
1.1k
views
GSEA application not launching
GSEA
updated 2.3 years ago by
GenoMax
154k • written 2.3 years ago by
Jen
▴ 100
1
vote
1
reply
1.1k
views
synteny viewer
comparative-genomics
synteny
updated 2.3 years ago by
cmdcolin
★ 4.3k • written 2.3 years ago by
shwetamgr1
▴ 20
1
vote
1
reply
1.4k
views
Filtering genes after TPM normalization
filtering
normalization
TPM
r
updated 2.3 years ago by
Meisam
▴ 250 • written 2.3 years ago by
AlexStar
▴ 200
1
vote
1
reply
883
views
Do rna SRA files contain introns ?
RNA-seq
SRA
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
firefox91
• 0
121,981 results • Page
247 of 2440
Recent Votes
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