1
vote
3
replies
675
views
0
votes
1
reply
717
views
updated 6 months ago by
andysw90
▴
20
•
written 10 months ago by
nizamov.1999
•
0
5
votes
5
replies
1.6k
views
Tool:
filterx : fast and efficient filter tool written in Rust for csv,fasta,fastq,gff,vcf,sam files.
updated 9 months ago by
Istvan Albert
103k
•
written 10 months ago by
dwpeng
▴
120
0
votes
1
reply
824
views
10 months ago by
Physalia-courses
★
2.6k
0
votes
0
replies
408
views
10 months ago by
Bruno
•
0
13
votes
8
replies
16k
views
1
vote
1
reply
688
views
10 months ago by
Burak Özyürek
▴
10
3
votes
2
replies
966
views
3
votes
4
replies
1.2k
views
2
votes
3
replies
937
views
updated 10 months ago by
Gordon Smyth
★
8.3k
•
written 10 months ago by
DdogBoss
▴
20
0
votes
1
reply
899
views
updated 10 months ago by
Mensur Dlakic
★
30k
•
written 10 months ago by
sleepystudent
•
0
0
votes
1
reply
485
views
2
votes
2
replies
632
views
0
votes
0
replies
309
views
4
votes
11
replies
1.8k
views
9 months ago by
Aspire
▴
390
0
votes
6
replies
1.3k
views
0
votes
1
reply
674
views
updated 10 months ago by
Ram
45k
•
written 10 months ago by
carolofharvest
▴
50
2
votes
5
replies
1.3k
views
1
vote
3
replies
687
views
1
vote
2
replies
585
views
0
votes
0
replies
465
views
10 months ago by
james.zhang20
▴
10
2
votes
2
replies
708
views
0
votes
0
replies
281
views
2
votes
1
reply
643
views
updated 10 months ago by
Jouni Sirén
▴
760
•
written 10 months ago by
guntul
▴
40
0
votes
0
replies
283
views
10 months ago by
vinita14ramtekey
▴
10
0
votes
1
reply
444
views
updated 10 months ago by
lieven.sterck
15k
•
written 10 months ago by
Muhammad
•
0
3
votes
6
replies
1.1k
views
1
vote
2
replies
935
views
0
votes
1
reply
547
views
2
votes
5
replies
1.1k
views
10 months ago by
mrashad
▴
80
3
votes
1
reply
480
views
0
votes
1
reply
427
views
updated 10 months ago by
biofalconch
★
1.3k
•
written 10 months ago by
ijarne
▴
20
1
vote
2
replies
654
views
10 months ago by
marionette.kent
•
0
1
vote
4
replies
822
views
0
votes
2
replies
1.0k
views
4
votes
4
replies
798
views
1
vote
2
replies
786
views
updated 10 months ago by
shenwei356
8.7k
•
written 10 months ago by
FJCF
•
0
0
votes
2
replies
893
views
3
votes
4
replies
1.7k
views
2
votes
2
replies
958
views
updated 10 months ago by
Istvan Albert
103k
•
written 10 months ago by
DBScan
▴
530
1
vote
1
reply
561
views
10 months ago by
erinda
▴
10
3
votes
8
replies
1.4k
views
updated 10 months ago by
Mensur Dlakic
★
30k
•
written 10 months ago by
dec986
▴
380
3
votes
6
replies
1.4k
views
10 months ago by
Alan Liu
▴
30
0
votes
1
reply
4.1k
views
1
vote
2
replies
1.9k
views
1
vote
3
replies
962
views
1
vote
0
replies
639
views
updated 10 months ago by
Ram
45k
•
written 10 months ago by
Fred Hutch (Recruiting)
▴
30
3
votes
6
replies
1.3k
views
updated 10 months ago by
jared.andrews07
★
19k
•
written 10 months ago by
mk
▴
310
0
votes
3
replies
1.2k
views
Recent Votes
Recent Locations •
All
France, 9 minutes ago
Heraklion, Crete, Greece, 10 minutes ago
Australia, 20 minutes ago
Canada, 22 minutes ago
United Kingdom, 25 minutes ago
Danemark - SDU, 36 minutes ago
India, 45 minutes ago
Recent Awards •
All
Popular Question to
Mark
▴
60
Popular Question to
Naveen
•
0
Popular Question to
Watermelon
▴
20
Popular Question to
1769mkc
★
1.3k
Popular Question to
Kent
▴
30
Popular Question to
ki
•
0
Popular Question to
Ant
▴
50
Recent Replies
Comment: RNA-SEQ where only a subset of genes is of interest
by
ATpoint
89k
Is this single-cell? How many genes are we talking about?
> The alternative would be to just use the raw data without normalization, run W…
Comment: Developing a genomics ML model using bytes?
by
ATpoint
89k
So essentially you work on a compression algorithm, is it? If so, be sure to bechmark your idea against the hundreds of existing and fast c…
Comment: How to get a legend from genoplotR?
by
antonioggsousa
3.4k
Hi,
I'm not familiar with this package or function, but from the function documentation that you had provided in the link, it says about …
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
I don't mean adapter contamination. I mean contamination of your sample with DNA from other organisms. In my previous lab, for example, we …
Answer: Trouble when installing arb
by
SilentGene
▴
120
I've got the same error when installing from `arb-6.0.6-source.tgz` and `arb-7.0-source.tgz`. Anyone has any solution?
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
Yes, I did check for adaptor contamination, and did not find any. I have kept all the reads with quality score of more than 30.
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
No overlapping reads? Have you checked for contamination?
Comment: Tried building a compact sequence format with 4-bit storage
by
Pranava
▴
10
I see, but the reason I was planning on using a 4bit system is so that there wouldn't be too much data loss but thank you for the suggesti…
Comment: Splice junctions plots for long-read seq data
by
alison.ludzki
•
0
Thank you! I will check out miso!
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
I did subsample the data to 30x coverage. I did run hifiasm on it, the log file did show some contents, but hifiasm ended again, stating th…
Comment: Tried building a compact sequence format with 4-bit storage
by
Alex Reynolds
36k
Using four bits for storage won't beat 2bit, of course, but direct access to a sequence of interest sounds interesting and useful and might…
Comment: Hifiasm is getting killed while trying to assemble a genome
by
Panos
★
1.8k
Why don't you subsample your HiFi reads and try running hifiasm again? Maybe this will help if you have memory problems. However, I haven't…
Comment: Is total miRNA in EV constant? Implications for library size normalization.
by
Gordon Smyth
★
8.3k
RNA-seq is very good at relative analyes. It would be straightforward to determine which miRNAs are relatively more abundant, compared to o…
Comment: Tried building a compact sequence format with 4-bit storage
by
Pranava
▴
10
Woah!!! Thank you very much, Matthias. I honestly didn't even know some of those existed and I will definitely go through them and try to u…
Traffic: 4131 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6