14 months ago by
gogeni5529
▴
80
2
votes
4
replies
998
views
17
votes
4
replies
17k
views
updated 14 months ago by
SilentGene
▴
120
•
written 6.6 years ago by
Dave Th
▴
60
0
votes
2
replies
1.0k
views
1
vote
7
replies
1.9k
views
2
votes
7
replies
1.6k
views
11 months ago by
rohitsatyam102
▴
940
1
vote
5
replies
1.0k
views
updated 14 months ago by
BioinfGuru
★
2.1k
•
written 14 months ago by
fluentin44
▴
20
0
votes
0
replies
651
views
0
votes
0
replies
509
views
updated 14 months ago by
GenoMax
153k
•
written 14 months ago by
oliverhooker
▴
110
0
votes
4
replies
1.1k
views
0
votes
0
replies
561
views
14 months ago by
Bioinformatics_begginner
▴
20
0
votes
2
replies
1.1k
views
updated 14 months ago by
ATpoint
89k
•
written 21 months ago by
sarahmanderni
▴
130
0
votes
2
replies
855
views
0
votes
0
replies
477
views
36
votes
14
replies
4.7k
views
9 follow
0
votes
0
replies
1.4k
views
0
votes
0
replies
415
views
2
votes
2
replies
758
views
updated 14 months ago by
Ram
45k
•
written 14 months ago by
user911111111
•
0
0
votes
2
replies
1.4k
views
8
votes
2
replies
940
views
updated 14 months ago by
yura.grabovska
▴
820
•
written 14 months ago by
ruth
▴
20
0
votes
0
replies
498
views
14 months ago by
sarahmanderni
▴
130
1
vote
1
reply
529
views
0
votes
0
replies
376
views
1
vote
1
reply
610
views
updated 14 months ago by
b.contreras.moreira
▴
490
•
written 14 months ago by
jet
•
0
0
votes
1
reply
463
views
2
votes
2
replies
623
views
14 months ago by
BioinfGuru
★
2.1k
1
vote
2
replies
897
views
0
votes
1
reply
639
views
3
votes
5
replies
2.0k
views
11
votes
9
replies
4.3k
views
8 follow
updated 14 months ago by
microbe77
▴
30
•
written 4.9 years ago by
Rafael Soler
★
1.3k
0
votes
1
reply
644
views
0
votes
2
replies
752
views
updated 14 months ago by
Jeremy Leipzig
23k
•
written 14 months ago by
ja569116
•
0
0
votes
2
replies
778
views
0
votes
0
replies
489
views
0
votes
0
replies
511
views
updated 14 months ago by
Ram
45k
•
written 14 months ago by
Physalia-courses
★
2.6k
0
votes
2
replies
612
views
14 months ago by
_quantum_girl_
▴
60
1
vote
2
replies
606
views
0
votes
0
replies
438
views
0
votes
0
replies
384
views
0
votes
2
replies
524
views
0
votes
3
replies
849
views
3
votes
3
replies
1.3k
views
1
vote
2
replies
1.1k
views
9
votes
13
replies
2.2k
views
7 follow
14 months ago by
myoui3122010
▴
30
2
votes
2
replies
847
views
0
votes
4
replies
1.5k
views
updated 14 months ago by
Nat.Nataren
▴
100
•
written 15 months ago by
Nimra
•
0
1
vote
4
replies
1.2k
views
3
votes
4
replies
1.9k
views
0
votes
0
replies
329
views
3
votes
4
replies
1.0k
views
0
votes
0
replies
323
views
Recent Votes
Recent Locations •
All
Perth, Australia, 3 minutes ago
United States, 12 minutes ago
United States, 16 minutes ago
United States, 16 minutes ago
Mexico, 24 minutes ago
Hong Kong, 26 minutes ago
United States, 42 minutes ago
Recent Awards •
All
Great Question to
zsc25001
▴
10
Popular Question to
curious
▴
890
Popular Question to
ramiro.barrantes
▴
60
Popular Question to
bkleiboeker
▴
370
Popular Question to
Duy
•
0
Popular Question to
ecSeq Bioinformatics
▴
20
Recent Replies
Answer: Does this adapter content from fastqc to warrant trimming prior to alignment?
by
GenoMax
153k
It is an investment in time and will ensure that there is no extraneous sequence is present, if you choose to do scanning/trimming.
That …
Comment: Restricting ncbi-genome-download (bacteria, viral, fungi, archaea, protozoa) to
by
saruman
▴
10
It is astonishing that there is no straightforward way to match accessions and their host. Anyhow, I will use `datasets` as suggested, thou…
Comment: Restricting ncbi-genome-download (bacteria, viral, fungi, archaea, protozoa) to
by
Mensur Dlakic
★
30k
Always good to learn new things.
Comment: Restricting ncbi-genome-download (bacteria, viral, fungi, archaea, protozoa) to
by
GenoMax
153k
> I don't think there are any host links in NCBI records
This information is not available for all genomes, but it is there for some of th…
Answer: Restricting ncbi-genome-download (bacteria, viral, fungi, archaea, protozoa) to
by
Mensur Dlakic
★
30k
As you said, the package does not support the search for hosts. Furthermore, I don't think there are any host links in NCBI records, so it …
Answer: Restricting ncbi-genome-download (bacteria, viral, fungi, archaea, protozoa) to
by
GenoMax
153k
There may be a better answer, but let us start here. This is a two (or more step) solution using NCBI `datasets` ([**LINK**][1]).
NOTE: I…
Answer: How do I use the STARSolo aligner with MGI DNBelab C series HT scRNAseq librarie
by
Vittorio
•
0
Joining the convo a bit late, but I found it super useful since I am struggling to analyze MGI data myself. For the library prep used in th…
Comment: How to overcome OS return value: 4 with SPAdes
by
marongiu.luigi
▴
760
Yep, that was it. I was using a G:-sync folder... Thank you.
Comment: Help with Model
by
i.sudbery
22k
There is no way to "code" this directly. Your problem is mathematics, not programming.
Standard stochastic models deal with a set of sta…
Answer: How to overcome OS return value: 4 with SPAdes
by
GenoMax
153k
I am going to hazard a guess that the spaces and email address in file path (you may want to redact your email from post above) is causing …
Comment: Hifiasm is getting killed while trying to assemble a genome
by
GenoMax
153k
Are you trying to reproduce the assembly result?
If not, the complete assembly is already available at NCBI: https://www.ncbi.nlm.nih.gov…
Comment: Genome Assembly QC from BAM files
by
GenoMax
153k
This may be another example where the assembly you obtained may be better than an existing one .. certainly as far as the accessory chromos…
Comment: Genome Assembly QC from BAM files
by
SomeOne
▴
240
There are some reference assemblies. Some close ones are at chromosome level but exact reference are not chromosome level assemblies.
Othe…
Comment: Understanding the relationship between hhr and a3m output of HHblits
by
Joe
22k
Nice detective work! :)
Comment: Hifiasm is getting killed while trying to assemble a genome
by
pranavdatar01
•
0
The SRA accession is SRX12366993
Traffic: 3977 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6