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written 9 weeks ago by
normanreppingen • 0
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Recent Replies
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296874978 • 0
Hi nazaninhoseinkhan, I have the similar GISTIC output file as you. All G-scores are 0. so you un...
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"filter by mean expression or variance is a matter of debate" Which one is better? Or which one d...
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Assuming single-tailed test, under the null hypothesis that there is no enrichment of diabetes ge...
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thank you. i see that the facet is suit for tumor-normal pair calling, but i have only tumor-only...
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Apologizes for confusion. I meant that they used two reference gene sets: euk and protist. I am n...
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I think so. If you search of `txid2759[Organism]` in the NCBI Protein portal, you get >72M hit...
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C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu by
protein_guru • 0
Good question. It was a mistake in part. The default behavior of ESearch is to return GIs, and I ...
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C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu by
genomax ♦ 75k
https://www.biostars.org/u/30494/ : Would this method work for 10^7 gi numbers? Those are a lot t...
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C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu by
genomax ♦ 75k
How did you end up using `gi` numbers? They were deprecated for end-users a couple of years ago. ...
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C: Mapping many GI numbers returned from ESearch to Accessions from nr.gz (non-redu by
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Thanks, I'll give that a shot. I've also come across this post (https://ncbiinsights.ncbi.nlm.nih...
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You are correct, RefSeq release will not include the other proteins. I have myself never tested ...
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Thanks for your reply. It appears that the RefSeq chunked DB won't necessarily contain all the se...
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