0
votes
0
replies
7
views
0
votes
0
replies
18
views
1 hour ago by
Aanushka
•
0
1
vote
2
replies
48
views
0
votes
1
reply
68
views
updated 5 hours ago by
seidel
11k
•
written 6 hours ago by
dare_devil
★
3.1k
0
votes
2
replies
137
views
0
votes
1
reply
93
views
3
votes
3
replies
189
views
0
votes
2
replies
223
views
0
votes
3
replies
213
views
updated 12 hours ago by
Ram
39k
•
written 18 hours ago by
Researcher
•
0
1
vote
0
replies
95
views
21 hours ago by
zhangdengwei
▴
190
0
votes
1
reply
125
views
updated 15 hours ago by
acvill
▴
290
•
written 22 hours ago by
tahsinkhan570
•
0
2
votes
3
replies
211
views
0
votes
0
replies
105
views
0
votes
2
replies
184
views
13 hours ago by
mattze731
▴
10
0
votes
0
replies
99
views
0
votes
0
replies
82
views
1 day ago by
hashim.rana11
▴
20
0
votes
0
replies
110
views
1 day ago by
Andy
▴
50
0
votes
1
reply
158
views
1
vote
9
replies
319
views
0
votes
1
reply
381
views
1
vote
4
replies
224
views
0
votes
2
replies
1.4k
views
0
votes
0
replies
103
views
0
votes
1
reply
168
views
updated 1 day ago by
jared.andrews07
★
14k
•
written 1 day ago by
B.N.
•
0
1
vote
0
replies
109
views
1 day ago by
Dan
▴
120
1
vote
2
replies
175
views
0
votes
0
replies
110
views
2
votes
5
replies
288
views
1
vote
3
replies
182
views
0
votes
0
replies
86
views
updated 1 day ago by
Ram
39k
•
written 1 day ago by
beausoleilmo
▴
530
0
votes
4
replies
200
views
0
votes
0
replies
87
views
2 days ago by
nicolo.gualandi
•
0
0
votes
0
replies
77
views
2 days ago by
english.server
▴
290
0
votes
6
replies
328
views
0
votes
1
reply
145
views
0
votes
0
replies
95
views
0
votes
1
reply
159
views
updated 2 days ago by
Hamid Ghaedi
2.9k
•
written 3 days ago by
younglin113
▴
50
0
votes
0
replies
136
views
1
vote
2
replies
191
views
18 minutes ago by
Ribo
▴
40
0
votes
3
replies
322
views
0
votes
4
replies
366
views
0
votes
0
replies
130
views
4 days ago by
m.esmaeilpour
▴
10
0
votes
0
replies
145
views
2
votes
3
replies
340
views
0
votes
0
replies
172
views
0
votes
0
replies
159
views
0
votes
5
replies
388
views
updated 4 days ago by
Joe
21k
•
written 5 days ago by
gunala.nikhil
•
0
0
votes
0
replies
164
views
4 days ago by
arshad1292
▴
90
0
votes
2
replies
238
views
0
votes
0
replies
142
views
4 days ago by
christoph.schubart
•
0
Recent Votes
Recent Locations •
All
Malaysia, just now
Berlin, just now
Barcelona, Spain, 1 minute ago
United Kingdom, 2 minutes ago
France/Nantes/Institut du Thorax - INSERM UMR1087, 3 minutes ago
McGill University, 3 minutes ago
Somewhere, 3 minutes ago
Recent Awards •
All
Scholar to
rpolicastro
12k
Scholar to
Joel Wallenius
▴
130
Popular Question to
Pegasus
▴
90
Popular Question to
resug
▴
30
Recent Replies
Comment: Differential protein expression analysis
by
Ribo
▴
40
Thank you!
Is there a recommended tutorial for proteomics analysis?
Comment: Limma returned only positive logFC values
by
melissachua90
▴
40
I clustered the samples into subtypes and am now comparing the differential expression across the subtypes.
Answer: Limma returned only positive logFC values
by
Gordon Smyth
★
6.1k
No, your code isn't correct. You are testing an intercept equal to zero instead of testing for a logFC. I wonder what comparison you were t…
Answer: Extract sequences from a fastq file by a list of IDs
by
GenoMax
129k
Using `filterbyname.sh` from [**BBMap suite**][1]:
You need to include the `/1` in the header in your list file (here I am using the `nam…
Comment: Limma returned only positive logFC values
by
melissachua90
▴
40
Yeah, I added the design matrix. `design <- model.matrix(~0+group)`. These are raw counts.
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes
by
Ayish
•
0
Thank you for reply. I have Illumina paired-end reads. Would it be fine if I use hard-masking for STAR and soft-masked genome for BRAKER2? …
Comment: Masking before RNA-Seq Alignment and Gene Prediction in Plant Genomes
by
Darked89
4.4k
Soft masking the genome (unless something changed) not make any difference for STAR. Depending on how your RNA-Seq is done (Illumina? paire…
Answer: How to handle NaN in emmax Kinship matrix?
by
Thu
•
0
Hi! Thanks for sharing your solution!
It works!
:)
Comment: Gene prediction software
by
Darked89
4.4k
Looks like there are five Clarias genomes:
* https://www.ncbi.nlm.nih.gov/genome/?term=txid13012[Organism:exp]
The most complete seems t…
Comment: Alignment of case vs. control from different origin
by
sativus
▴
10
Again, thank you so much for these very clearly explained summaries. After reading some articles on the matter, i feel i have a much better…
Answer: Extract sequences from a fastq file by a list of IDs
by
colindaven
4.9k
Some people I know have used filter-fastq successfully: https://github.com/Floor-Lab/filter-fastq
Comment: Extract sequences from a fastq file by a list of IDs
by
Pierre Lindenbaum
154k
> but none of them work for me
https://meta.stackexchange.com/questions/147616/
Comment: Extract sequences from a fastq file by a list of IDs
by
Pierre Lindenbaum
154k
https://meta.stackexchange.com/questions/147616/
Comment: Extract sequences from a fastq file by a list of IDs
by
mhpakdel96
•
0
I have tried this one before but the output file is empty
Comment: Extract sequences from a fastq file by a list of IDs
by
mhpakdel96
•
0
I have tried all of them but none of them work for me
Traffic: 2171 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6